# STOCKHOLM 1.0
#=GF ID 1.10.472.10/FF/000158
#=GF DE RNA polymerase II holoenzyme cyclin-like subunit
#=GF AC 1.10.472.10/FF/000158
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 34.747
#=GS Q5BBA8/8-19_150-213_249-286      AC Q5BBA8
#=GS Q5BBA8/8-19_150-213_249-286      OS Aspergillus nidulans FGSC A4
#=GS Q5BBA8/8-19_150-213_249-286      DE RNA polymerase II holoenzyme cyclin-like subunit
#=GS Q5BBA8/8-19_150-213_249-286      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A1C7R6/8-19_150-225_249-286      AC A1C7R6
#=GS A1C7R6/8-19_150-225_249-286      OS Aspergillus clavatus NRRL 1
#=GS A1C7R6/8-19_150-225_249-286      DE RNA polymerase II holoenzyme cyclin-like subunit
#=GS A1C7R6/8-19_150-225_249-286      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus clavatus; 
#=GS Q4WZT9/8-19_150-221_249-285      AC Q4WZT9
#=GS Q4WZT9/8-19_150-221_249-285      OS Aspergillus fumigatus Af293
#=GS Q4WZT9/8-19_150-221_249-285      DE RNA polymerase II holoenzyme cyclin-like subunit
#=GS Q4WZT9/8-19_150-221_249-285      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A397G846/8-19_150-221_249-285  AC A0A397G846
#=GS A0A397G846/8-19_150-221_249-285  OS Aspergillus thermomutatus
#=GS A0A397G846/8-19_150-221_249-285  DE RNA polymerase II holoenzyme cyclin-like subunit
#=GS A0A397G846/8-19_150-221_249-285  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus thermomutatus; 
#=GS A0A1L9TZY0/8-19_150-215_249-286  AC A0A1L9TZY0
#=GS A0A1L9TZY0/8-19_150-215_249-286  OS Aspergillus sydowii CBS 593.65
#=GS A0A1L9TZY0/8-19_150-215_249-286  DE Uncharacterized protein
#=GS A0A1L9TZY0/8-19_150-215_249-286  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus sydowii; 
#=GS A0A3D8RX61/8-19_150-211_249-286  AC A0A3D8RX61
#=GS A0A3D8RX61/8-19_150-211_249-286  OS Aspergillus mulundensis
#=GS A0A3D8RX61/8-19_150-211_249-286  DE RNA polymerase II holoenzyme cyclin-like subunit
#=GS A0A3D8RX61/8-19_150-211_249-286  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus mulundensis; 
#=GS A0A1L9PC66/8-19_150-215_249-286  AC A0A1L9PC66
#=GS A0A1L9PC66/8-19_150-215_249-286  OS Aspergillus versicolor CBS 583.65
#=GS A0A1L9PC66/8-19_150-215_249-286  DE Uncharacterized protein
#=GS A0A1L9PC66/8-19_150-215_249-286  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus versicolor; 
#=GS A0A1L9WLQ6/8-19_150-216_248-284  AC A0A1L9WLQ6
#=GS A0A1L9WLQ6/8-19_150-216_248-284  OS Aspergillus aculeatus ATCC 16872
#=GS A0A1L9WLQ6/8-19_150-216_248-284  DE Uncharacterized protein
#=GS A0A1L9WLQ6/8-19_150-216_248-284  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus aculeatus; 
#=GS A0A395I9Z0/8-19_150-216_248-284  AC A0A395I9Z0
#=GS A0A395I9Z0/8-19_150-216_248-284  OS Aspergillus homomorphus CBS 101889
#=GS A0A395I9Z0/8-19_150-216_248-284  DE C-type cyclin
#=GS A0A395I9Z0/8-19_150-216_248-284  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus homomorphus; 
#=GS A0A0J5Q233/8-19_150-221_249-285  AC A0A0J5Q233
#=GS A0A0J5Q233/8-19_150-221_249-285  OS Aspergillus fumigatus Z5
#=GS A0A0J5Q233/8-19_150-221_249-285  DE C-type cyclin (Fic1)
#=GS A0A0J5Q233/8-19_150-221_249-285  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS B0XUU3/8-19_150-221_249-285      AC B0XUU3
#=GS B0XUU3/8-19_150-221_249-285      OS Aspergillus fumigatus A1163
#=GS B0XUU3/8-19_150-221_249-285      DE C-type cyclin (Fic1), putative
#=GS B0XUU3/8-19_150-221_249-285      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GF SQ 11
Q5BBA8/8-19_150-213_249-286              STQRKHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLSLLYPPHIIAVMAIIVAVVFKPSSQTA-------------QKLIAWLAESEVDIKAVIESTQELVSLYEVWEQYSEKN
A1C7R6/8-19_150-225_249-286              STQRRHWLFTREVHHPYRTLSGLQSELSLTSDEVALAWSVINDHYLTDLPLLYSPHVIAVMAVMVAVVFKPGPGN-FHGSAAPVLAGAMQKLINWLAESEVDIKAVIECTQELVSLYEVWEQYSEKN
Q4WZT9/8-19_150-221_249-285              STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYAPHVIAVMAIIVAVVFKPNSGN-FHGSAAPVL----QKLINWLAESEVDIKGVIECTQELVSLYEVWEQYSEK-
A0A397G846/8-19_150-221_249-285          STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYAPHVIAVMAIIVAIVFKPSSGN-FHGSAAPVL----QKLISWLAESEVDIKAVIECTQELVSLYEVWEQYSEK-
A0A1L9TZY0/8-19_150-215_249-286          STQRRHWLFSREVHHPYRTLSDLQPELSLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMATIVAVVFKPSSQTAFH-----------QKLVSWLAESEIDIKAVIECTQELVSLYEVWEQYNEKN
A0A3D8RX61/8-19_150-211_249-286          STQRRHWLFTREVHHPYRTLSELQPELSLTSDEIALAWSVINDHYLTDLSLLYPPHVIAVMAVIVAVVFKPSSQ---------------QKLIAWLAESEVDIKAVIESTQELVSLYEVWEQYSEKN
A0A1L9PC66/8-19_150-215_249-286          STQRRHWLFSREVHHPYRTLSDLQSELSLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMAIIVAVVFKPSSQTAFH-----------QKLVSWLAESEIDIKAVIESTQDLISLYEAWEQYNDKN
A0A1L9WLQ6/8-19_150-216_248-284          STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMAIIVAVVFKPSQTS-FHGS---------QRLVAWLAESEIDIKAVIECTQELVSLYEIWEQYSEK-
A0A395I9Z0/8-19_150-216_248-284          STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYPPHVIAVMAIIVAVVFKPSQTS-FHGS---------QRLVAWLAESEIDITAVIECTQELVSLYEIWEQYSEK-
A0A0J5Q233/8-19_150-221_249-285          STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYAPHVIAVMAIIVAVVFKPNSGN-FHGSAAPVL----QKLINWLAESEVDIKGVIECTQELVSLYEVWEQYSEK-
B0XUU3/8-19_150-221_249-285              STQRRHWLFTREVHHPYRTLSELQPELSLTSDEVALAWSVINDHYLTDLPLLYAPHVIAVMAIIVAVVFKPNSGN-FHGSAAPVL----QKLINWLAESEVDIKGVIECTQELVSLYEVWEQYSEK-
#=GC scorecons                           9999899997999999999996996999999998999999999999999799959989999968998999955440552211111000097974999999799769996998989999699997892
#=GC scorecons_70                        *****************************************************_*****************__________________****_********************************_
#=GC scorecons_80                        *********_***********_**_************************_***_********_********__________________***__******_***_***_*********_****_**_
#=GC scorecons_90                        *********_***********_**_************************_***_********__*******__________________*_*__******_**__***_*********_****_**_
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