# STOCKHOLM 1.0
#=GF ID 1.10.472.10/FF/000128
#=GF DE TFIIK subunit
#=GF AC 1.10.472.10/FF/000128
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 65.444
#=GS P37366/98-210      AC P37366
#=GS P37366/98-210      OS Saccharomyces cerevisiae S288C
#=GS P37366/98-210      DE Cyclin CCL1
#=GS P37366/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P37366/98-210      DR GO; GO:0005515; GO:0005675; GO:0005739; GO:0006366; GO:0016538; GO:0042594; GO:0070816; GO:0070985; GO:1905866; 
#=GS Q59T89/99-196      AC Q59T89
#=GS Q59T89/99-196      OS Candida albicans SC5314
#=GS Q59T89/99-196      DE TFIIH complex kinase subunit
#=GS Q59T89/99-196      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q751H9/88-197      AC Q751H9
#=GS Q751H9/88-197      OS Eremothecium gossypii ATCC 10895
#=GS Q751H9/88-197      DE AGL273Cp
#=GS Q751H9/88-197      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XII1/86-196      AC R9XII1
#=GS R9XII1/86-196      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XII1/86-196      DE AaceriAGL273Cp
#=GS R9XII1/86-196      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS J8Q103/97-210      AC J8Q103
#=GS J8Q103/97-210      OS Saccharomyces arboricola H-6
#=GS J8Q103/97-210      DE Ccl1p
#=GS J8Q103/97-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GPV8/98-210      AC H0GPV8
#=GS H0GPV8/98-210      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GPV8/98-210      DE Ccl1p
#=GS H0GPV8/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VFZ9/98-210  AC A0A0L8VFZ9
#=GS A0A0L8VFZ9/98-210  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VFZ9/98-210  DE CCL1p Cyclin associated with protein kinase Kin28p
#=GS A0A0L8VFZ9/98-210  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RA58/98-210  AC A0A0L8RA58
#=GS A0A0L8RA58/98-210  OS Saccharomyces eubayanus
#=GS A0A0L8RA58/98-210  DE CCL1-like protein
#=GS A0A0L8RA58/98-210  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C4YF86/99-196      AC C4YF86
#=GS C4YF86/99-196      OS Candida albicans WO-1
#=GS C4YF86/99-196      DE Uncharacterized protein
#=GS C4YF86/99-196      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A6ZWR8/98-210      AC A6ZWR8
#=GS A6ZWR8/98-210      OS Saccharomyces cerevisiae YJM789
#=GS A6ZWR8/98-210      DE Transcription initiation factor TFIIH subunit
#=GS A6ZWR8/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LL86/98-210      AC B3LL86
#=GS B3LL86/98-210      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LL86/98-210      DE TFIIK subunit
#=GS B3LL86/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VTI3/98-210      AC B5VTI3
#=GS B5VTI3/98-210      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VTI3/98-210      DE YPR025Cp-like protein
#=GS B5VTI3/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZJ49/98-210      AC C8ZJ49
#=GS C8ZJ49/98-210      OS Saccharomyces cerevisiae EC1118
#=GS C8ZJ49/98-210      DE Ccl1p
#=GS C8ZJ49/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GQB3/98-210      AC C7GQB3
#=GS C7GQB3/98-210      OS Saccharomyces cerevisiae JAY291
#=GS C7GQB3/98-210      DE Ccl1p
#=GS C7GQB3/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WPK3/98-210      AC G2WPK3
#=GS G2WPK3/98-210      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WPK3/98-210      DE K7_Ccl1p
#=GS G2WPK3/98-210      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 15
P37366/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
Q59T89/99-196              -----------------STYLDFYIQNITTTCNFFKMPTQVRLTAASFFKKFYLVNSVMEFHPKNVLYTCIFLAAKSENYFISIESYVKALKGTDTSHILDLEFIVLQSLKFTLL
Q751H9/88-197              ---ALEQMAVPLTADEELKLVNFYAKKVRHFGNSLELPTEVTATAISFFRKFFLTNSVMELHPKNILWTTIFLACKSENYFLGIDSFS-KATTRKEL-ILKYEYTLLESLKFTLM
R9XII1/86-196              --TALEQMAVPLTADEELKLVNFYAKKVRHFGNSLELPTEVTATAISFFRKFFLTNSVMELHPKNILWTTIFLACKSENYFLGIDSFS-KATTRKDI-ILKYEYKLLESLKFTLM
J8Q103/97-210              EMKVLEAKAIPLTMEEELSLVNFYAKKVQVIAQHLNLPTEVVATSISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRES-ILKSEFKLLESLKFSLL
H0GPV8/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
A0A0L8VFZ9/98-210          -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
A0A0L8RA58/98-210          -VKILEAKAIPLTMEEELSLVNFYAKKVQVIAQHLNLPTEVVATSISFFRRFFLENSVMHIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRES-IIKYEFKLLESLKFSLL
C4YF86/99-196              -----------------STYLDFYIQNITTTCNFFKMPTQVRLTAASFFKKFYLVNSVMEFHPKNVLYTCIFLAAKSENYFISIESYVKALKGTDTSHILDLEFIVLQSLKFTLL
A6ZWR8/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
B3LL86/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
B5VTI3/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
C8ZJ49/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
C7GQB3/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
G2WPK3/98-210              -IKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDS-VLKFEFKLLESLKFSLL
#=GC scorecons             0122442243444234454566996667444454656996945976999779794999965599676595999959999997777975355656556078659746969999697
#=GC scorecons_70          ____________________****_***______*_*****__**_********_****___**_**_*_****_************____*_*__*_**__**_*******_**
#=GC scorecons_80          ______________________**___*_________**_*__**_****_***_****___**_*__*_****_*******__***____________*__**__*_****_**
#=GC scorecons_90          ______________________**_____________**_*__*__***__*_*_****___**____*_****_******____*_____________*__*___*_****_*_
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