# STOCKHOLM 1.0 #=GF ID 1.10.472.10/FF/000121 #=GF DE Transcription factor IIIB #=GF AC 1.10.472.10/FF/000121 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 90.926 #=GS O81787/59-161 AC O81787 #=GS O81787/59-161 OS Arabidopsis thaliana #=GS O81787/59-161 DE Plant-specific TFIIB-related protein PTF2 #=GS O81787/59-161 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS O81787/59-161 DR GO; GO:0001093; GO:0003690; GO:0005515; GO:0005634; GO:0009793; GO:0009846; GO:0042803; GO:0070063; #=GS Q54U85/65-169 AC Q54U85 #=GS Q54U85/65-169 OS Dictyostelium discoideum #=GS Q54U85/65-169 DE Transcription factor IIIB #=GS Q54U85/65-169 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54U85/65-169 DR GO; GO:0000126; GO:0005634; GO:0006383; GO:0006384; #=GS Q387K4/68-167 AC Q387K4 #=GS Q387K4/68-167 OS Trypanosoma brucei brucei TREU927 #=GS Q387K4/68-167 DE Transcription factor, putative #=GS Q387K4/68-167 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS Q387K4/68-167 DR GO; GO:0005634; GO:0005667; GO:0006351; GO:0042791; GO:0042796; GO:0042797; #=GS A0A131MBG0/73-173 AC A0A131MBG0 #=GS A0A131MBG0/73-173 OS Caenorhabditis elegans #=GS A0A131MBG0/73-173 DE BRF (Transcription factor) homolog #=GS A0A131MBG0/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A131MCT5/73-173 AC A0A131MCT5 #=GS A0A131MCT5/73-173 OS Caenorhabditis elegans #=GS A0A131MCT5/73-173 DE BRF (Transcription factor) homolog #=GS A0A131MCT5/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS D7TJK6/65-163 AC D7TJK6 #=GS D7TJK6/65-163 OS Vitis vinifera #=GS D7TJK6/65-163 DE Uncharacterized protein #=GS D7TJK6/65-163 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS D7UCC1/65-164 AC D7UCC1 #=GS D7UCC1/65-164 OS Vitis vinifera #=GS D7UCC1/65-164 DE Uncharacterized protein #=GS D7UCC1/65-164 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A2EJ51/69-167 AC A2EJ51 #=GS A2EJ51/69-167 OS Trichomonas vaginalis #=GS A2EJ51/69-167 DE Transcription factor TFIIB repeat family protein #=GS A2EJ51/69-167 DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; #=GS A0A454XMW8/74-178 AC A0A454XMW8 #=GS A0A454XMW8/74-178 OS Pristionchus pacificus #=GS A0A454XMW8/74-178 DE Brf-1 #=GS A0A454XMW8/74-178 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A8XH51/73-189 AC A8XH51 #=GS A8XH51/73-189 OS Caenorhabditis briggsae #=GS A8XH51/73-189 DE Protein CBR-BRF-1 #=GS A8XH51/73-189 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS G0N9C9/73-173 AC G0N9C9 #=GS G0N9C9/73-173 OS Caenorhabditis brenneri #=GS G0N9C9/73-173 DE CBN-BRF-1 protein #=GS G0N9C9/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A261C0S3/73-173 AC A0A261C0S3 #=GS A0A261C0S3/73-173 OS Caenorhabditis latens #=GS A0A261C0S3/73-173 DE Uncharacterized protein #=GS A0A261C0S3/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS E3LQF7/73-173 AC E3LQF7 #=GS E3LQF7/73-173 OS Caenorhabditis remanei #=GS E3LQF7/73-173 DE CRE-BRF-1 protein #=GS E3LQF7/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A1I7T759/73-173 AC A0A1I7T759 #=GS A0A1I7T759/73-173 OS Caenorhabditis tropicalis #=GS A0A1I7T759/73-173 DE Uncharacterized protein #=GS A0A1I7T759/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS A0A2G5V0E0/73-173 AC A0A2G5V0E0 #=GS A0A2G5V0E0/73-173 OS Caenorhabditis nigoni #=GS A0A2G5V0E0/73-173 DE Uncharacterized protein #=GS A0A2G5V0E0/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS H3FK17/74-178 AC H3FK17 #=GS H3FK17/74-178 OS Pristionchus pacificus #=GS H3FK17/74-178 DE Uncharacterized protein #=GS H3FK17/74-178 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A261C0S4/73-173 AC A0A261C0S4 #=GS A0A261C0S4/73-173 OS Caenorhabditis latens #=GS A0A261C0S4/73-173 DE Uncharacterized protein #=GS A0A261C0S4/73-173 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GF SQ 17 O81787/59-161 -VLDYKDKKIYEANNLIEETTERL-NLGN-KTEVIKSMISKLTDGEFGQGEWFPILIGACCYAVVREEGKGVLSMEEVAYEV----------------GCDLHQLGPMIKRVVDHLDLELRE- Q54U85/65-169 GGRDSRAMSVENARKKLDQIGNSL-RIRSHLIDSAQRTFELAMENNFTKGRQTRLVAAACLYIVCRRERTP-HLLIDFSENL----------------QVNVFIVAGTFLQLIKLLNIQLPIV Q387K4/68-167 ----SARPSIEAARRGMATIARQL-DVSDDMVEAALGLYKLAVSLNAVSG-ARPAILCAVLYAMCRRERTS-HMVFDFADAT----------------GESPYDILSYMHLVCEATRTEVPVI A0A131MBG0/73-173 -SQESREMTYAKGRKVIDELGSQL-RINSHCMNTAFNFYKMCVSRNLTRGRNRSSVVAVCMYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNYLSRSLRINL--- A0A131MCT5/73-173 -SQESREMTYAKGRKVIDELGSQL-RINSHCMNTAFNFYKMCVSRNLTRGRNRSSVVAVCMYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNYLSRSLRINL--- D7TJK6/65-163 ---NYKDKKIFEAQKLIDDLLFKL-GFSSEKSNEVRTMVATITEGEFGQGDWLPVLVGACSY-VVRRQSNRALSIAEVGSVI----------------GSDVYELGQMIRRVVEFLNLKL--- D7UCC1/65-164 ---NYKDKKIFEAQKLIDDLMFKL-GFSSEKSNEVRTMVSTITEGEFGQGDWFPVLVGACSY-VVRRRSNRALPIAEVGAVI----------------GCDVYELGRMIGRVVEFLNLKLP-- A2EJ51/69-167 ----VSTQTVTEGLNKIDAICDNLPKLSQDAVELAHRIYQIAVKHRFTRGRTIEIVSAAAVYVAIRVNRSSGYLLDDVAEHV----------------SCGIYELAATALRLAHAVNQP---- A0A454XMW8/74-178 ATQESREVTFAKGKKLIEEVASQL-RINKHCVDTAFNFFKMCVTRNLTRGRMRTHVVAACLYMTCRLENTS-HLLLDFSDVT----------------QVNVYDLGRTLNFLSRSLRINLPTT A8XH51/73-189 -SQESREMTYAKGKKVIDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRASVVAVCLYITCRLENTA-HLLLDFSDVTQVSSLPFLLYVRIPRFQINVFDLGRNLNFISRSLRINL--- G0N9C9/73-173 -SQESREMTYAKGRKVVDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRSSVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFISRALRINL--- A0A261C0S3/73-173 -SQESREMTYAKGRKVIDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRSSVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFIARSLRINL--- E3LQF7/73-173 -SQESREMTYAKGRKVIDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRSSVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFIARSLRINL--- A0A1I7T759/73-173 -SQESREMTYAKGRKVIDELGSQL-RINGHCMNTAFNFFKMCVSRNLTRGRNRSSVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFIARSLRINL--- A0A2G5V0E0/73-173 -SQESREMTYAKGKKVIDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRASVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFISRSLRINL--- H3FK17/74-178 ATQESREVTFAKGKKLIEEVASQL-RINKHCVDTAFNFFKMCVTRNLTRGRMRTHVVAACLYMTCRLENTS-HLLLDFSDVT----------------QVNVYDLGRTLNFLSRSLRINLPTT A0A261C0S4/73-173 -SQESREMTYAKGRKVIDELGSQL-RINAHCMNTAFNFFKMCVSRNLTRGRNRSSVVAVCLYITCRLENTA-HLLLDFSDVT----------------QINVFDLGRNLNFIARSLRINL--- #=GC scorecons 022455535435646476553359055534345463445444544555594334365566493559364540556376555500000000000000005356657644533545375546100 #=GC scorecons_70 ______________*_**_____*__________*______________*_____*___*_*___*_*______*_*________________________**_*__________*___*___ #=GC scorecons_80 ________________*______*_________________________*___________*___*__________*___________________________*__________________ #=GC scorecons_90 _______________________*_________________________*___________*___*_________________________________________________________ //