# STOCKHOLM 1.0
#=GF ID 1.10.443.10/FF/000006
#=GF DE Prophage integrase IntS
#=GF AC 1.10.443.10/FF/000006
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 6.984
#=GS P37326/196-376      AC P37326
#=GS P37326/196-376      OS Escherichia coli K-12
#=GS P37326/196-376      DE Prophage integrase IntS
#=GS P37326/196-376      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS P37326/196-376      DR GO; GO:0032359; GO:0042802; GO:0043565; 
#=GS A5VW56/196-376      AC A5VW56
#=GS A5VW56/196-376      OS Enterobacteria phage CUS-3
#=GS A5VW56/196-376      DE Integrase
#=GS A5VW56/196-376      DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Enterobacteria phage CUS-3; 
#=GS K7P7E1/196-378      AC K7P7E1
#=GS K7P7E1/196-378      OS Escherichia phage HK633
#=GS K7P7E1/196-378      DE Integrase
#=GS K7P7E1/196-378      DR ORG; Viruses; Caudovirales; Siphoviridae; Hendrixvirus; Escherichia virus HK633; 
#=GS E7DYQ6/209-388      AC E7DYQ6
#=GS E7DYQ6/209-388      OS Enterobacteria phage VT2phi_272
#=GS E7DYQ6/209-388      DE Putative integrase
#=GS E7DYQ6/209-388      DR ORG; Viruses; Caudovirales; Podoviridae; Sepvirinae; Oslovirus; Enterobacteria phage VT2phi_272; 
#=GS A0A3G3M6X4/196-376  AC A0A3G3M6X4
#=GS A0A3G3M6X4/196-376  OS Escherichia phage N7
#=GS A0A3G3M6X4/196-376  DE Putative integrase
#=GS A0A3G3M6X4/196-376  DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Escherichia phage N7; 
#=GS P37317/196-376      AC P37317
#=GS P37317/196-376      OS Shigella virus Sf6
#=GS P37317/196-376      DE Integrase
#=GS P37317/196-376      DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Shigella virus Sf6; 
#=GS G8EYJ8/197-376      AC G8EYJ8
#=GS G8EYJ8/197-376      OS Enterobacteria phage IME10
#=GS G8EYJ8/197-376      DE Integrase
#=GS G8EYJ8/197-376      DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Enterobacteria phage IME10; 
#=GS Q9AZ40/197-376      AC Q9AZ40
#=GS Q9AZ40/197-376      OS Salmonella virus HK620
#=GS Q9AZ40/197-376      DE Integrase
#=GS Q9AZ40/197-376      DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus HK620; 
#=GS A0A3D8XE27/196-376  AC A0A3D8XE27
#=GS A0A3D8XE27/196-376  OS Enterobacter sp. EC-NT1
#=GS A0A3D8XE27/196-376  DE Integrase
#=GS A0A3D8XE27/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter sp. EC-NT1; 
#=GS H9MZH0/196-376      AC H9MZH0
#=GS H9MZH0/196-376      OS Shigella flexneri
#=GS H9MZH0/196-376      DE Integrase protein
#=GS H9MZH0/196-376      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A2X4W7F1/196-376  AC A0A2X4W7F1
#=GS A0A2X4W7F1/196-376  OS Salmonella enterica subsp. arizonae
#=GS A0A2X4W7F1/196-376  DE Tyrosine recombinase xerD
#=GS A0A2X4W7F1/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. arizonae; 
#=GS A0A370VBY4/196-376  AC A0A370VBY4
#=GS A0A370VBY4/196-376  OS Escherichia marmotae
#=GS A0A370VBY4/196-376  DE Putative prophage CPS-53 integrase
#=GS A0A370VBY4/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia marmotae; 
#=GS A0A3V4XCE5/197-376  AC A0A3V4XCE5
#=GS A0A3V4XCE5/197-376  OS Salmonella enterica subsp. enterica
#=GS A0A3V4XCE5/197-376  DE DUF4102 domain-containing protein
#=GS A0A3V4XCE5/197-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS B7MGW4/196-376      AC B7MGW4
#=GS B7MGW4/196-376      OS Escherichia coli S88
#=GS B7MGW4/196-376      DE Putative prophage CPS-53 integrase CPS-53 (KpLE1) prophage
#=GS B7MGW4/196-376      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0H2Z115/196-376  AC A0A0H2Z115
#=GS A0A0H2Z115/196-376  OS Escherichia coli APEC O1
#=GS A0A0H2Z115/196-376  DE Putative phage integrase
#=GS A0A0H2Z115/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0E2L3T5/196-376  AC A0A0E2L3T5
#=GS A0A0E2L3T5/196-376  OS Escherichia coli UMEA 3162-1
#=GS A0A0E2L3T5/196-376  DE Integrase
#=GS A0A0E2L3T5/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1V2T4V1/196-376  AC A0A1V2T4V1
#=GS A0A1V2T4V1/196-376  OS Escherichia coli
#=GS A0A1V2T4V1/196-376  DE DUF4102 domain-containing protein
#=GS A0A1V2T4V1/196-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS Q716F9/196-376      AC Q716F9
#=GS Q716F9/196-376      OS Shigella virus Sf6
#=GS Q716F9/196-376      DE Gene 16 protein
#=GS Q716F9/196-376      DR ORG; Viruses; Caudovirales; Podoviridae; Lederbergvirus; Shigella virus Sf6; 
#=GS A0A0H3JH97/197-376  AC A0A0H3JH97
#=GS A0A0H3JH97/197-376  OS Escherichia coli O157:H7
#=GS A0A0H3JH97/197-376  DE Integrase
#=GS A0A0H3JH97/197-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1Z3V1G4/197-376  AC A0A1Z3V1G4
#=GS A0A1Z3V1G4/197-376  OS Escherichia coli O157
#=GS A0A1Z3V1G4/197-376  DE Integrase
#=GS A0A1Z3V1G4/197-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0K6DW69/197-376  AC A0A0K6DW69
#=GS A0A0K6DW69/197-376  OS Escherichia coli
#=GS A0A0K6DW69/197-376  DE DUF4102 domain-containing protein
#=GS A0A0K6DW69/197-376  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0H3PP34/209-388  AC A0A0H3PP34
#=GS A0A0H3PP34/209-388  OS Escherichia coli O157:H7 str. EC869
#=GS A0A0H3PP34/209-388  DE Integrase
#=GS A0A0H3PP34/209-388  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS Q8XCM9/209-388      AC Q8XCM9
#=GS Q8XCM9/209-388      OS Escherichia coli O157:H7
#=GS Q8XCM9/209-388      DE Putative prophage integrase
#=GS Q8XCM9/209-388      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS C3T1L7/209-388      AC C3T1L7
#=GS C3T1L7/209-388      OS Escherichia coli
#=GS C3T1L7/209-388      DE Putative prophage Sf6-like integrase
#=GS C3T1L7/209-388      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A0F6C749/209-388  AC A0A0F6C749
#=GS A0A0F6C749/209-388  OS Escherichia coli Xuzhou21
#=GS A0A0F6C749/209-388  DE Putative prophage Sf6-like integrase
#=GS A0A0F6C749/209-388  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GF SQ 25
P37326/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A5VW56/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
K7P7E1/196-378              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWWAD
E7DYQ6/209-388              -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A3G3M6X4/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
P37317/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
G8EYJ8/197-376              -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENMIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
Q9AZ40/197-376              -FPFLPADQIPAFNKALATFSGSIVSLIATKILRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A3D8XE27/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
H9MZH0/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A2X4W7F1/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSAQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEAQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A370VBY4/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A3V4XCE5/197-376          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
B7MGW4/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0H2Z115/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0E2L3T5/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A1V2T4V1/196-376          NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMLWKNVDFENRIITIDASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
Q716F9/196-376              NFPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0H3JH97/197-376          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A1Z3V1G4/197-376          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0K6DW69/197-376          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0H3PP34/209-388          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
Q8XCM9/209-388              -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
C3T1L7/209-388              -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
A0A0F6C749/209-388          -FPFLPADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIEASVMKGRKIHVVPMSDQVVELLTTLSSITKPVSEFVFAGRNDKKKSICENAVLLVIKQIGYEGLESGHGFRHEFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNHAQYLDKRREMMQWW--
#=GC scorecons              299999999999999999999999999999989999999999999959999999989999799999999999999989989999999999999999999999999969999999999999999999999999999999999999999999899999999999999999999999999999900
#=GC scorecons_70           _*********************************************_**************************************************************************************************************************************__
#=GC scorecons_80           _*********************************************_***********************************************************_**************************************************************************__
#=GC scorecons_90           _*********************************************_*************_*********************************************_**************************************************************************__
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