# STOCKHOLM 1.0
#=GF ID 1.10.418.20/FF/000011
#=GF DE Ubiquitin-like-specific protease 1D
#=GF AC 1.10.418.20/FF/000011
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 39.953
#=GS Q2PS26/334-384_514-574      AC Q2PS26
#=GS Q2PS26/334-384_514-574      OS Arabidopsis thaliana
#=GS Q2PS26/334-384_514-574      DE Ubiquitin-like-specific protease 1D
#=GS Q2PS26/334-384_514-574      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q2PS26/334-384_514-574      DR GO; GO:0005634; GO:0009651; GO:0010228; GO:0016926; GO:0070139; GO:0070140; 
#=GS Q8RWN0/325-372_501-561      AC Q8RWN0
#=GS Q8RWN0/325-372_501-561      OS Arabidopsis thaliana
#=GS Q8RWN0/325-372_501-561      DE Ubiquitin-like-specific protease 1C
#=GS Q8RWN0/325-372_501-561      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8RWN0/325-372_501-561      DR GO; GO:0005634; GO:0009651; GO:0010228; GO:0016926; GO:0070139; GO:0070140; 
#=GS A0A178W346/194-241_370-430  AC A0A178W346
#=GS A0A178W346/194-241_370-430  OS Arabidopsis thaliana
#=GS A0A178W346/194-241_370-430  DE Cysteine proteinases superfamily protein
#=GS A0A178W346/194-241_370-430  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A384LH87/194-241_370-430  AC A0A384LH87
#=GS A0A384LH87/194-241_370-430  OS Arabidopsis thaliana
#=GS A0A384LH87/194-241_370-430  DE ULP1C
#=GS A0A384LH87/194-241_370-430  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178W2X8/324-371_500-560  AC A0A178W2X8
#=GS A0A178W2X8/324-371_500-560  OS Arabidopsis thaliana
#=GS A0A178W2X8/324-371_500-560  DE ULP1C
#=GS A0A178W2X8/324-371_500-560  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS V4KE68/329-379_509-569      AC V4KE68
#=GS V4KE68/329-379_509-569      OS Eutrema salsugineum
#=GS V4KE68/329-379_509-569      DE Uncharacterized protein
#=GS V4KE68/329-379_509-569      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1J3H0G3/338-388_519-579  AC A0A1J3H0G3
#=GS A0A1J3H0G3/338-388_519-579  OS Noccaea caerulescens
#=GS A0A1J3H0G3/338-388_519-579  DE Ubiquitin-like-specific protease 1D
#=GS A0A1J3H0G3/338-388_519-579  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0HWU3/339-389_519-579      AC R0HWU3
#=GS R0HWU3/339-389_519-579      OS Capsella rubella
#=GS R0HWU3/339-389_519-579      DE Uncharacterized protein
#=GS R0HWU3/339-389_519-579      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7KXB3/343-393_523-583      AC D7KXB3
#=GS D7KXB3/343-393_523-583      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KXB3/343-393_523-583      DE Cysteine-type peptidase
#=GS D7KXB3/343-393_523-583      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GF SQ 9
Q2PS26/334-384_514-574              YPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADVQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKKWFRPDEASALRIKIRNTLI
Q8RWN0/325-372_501-561              ---SDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNILV
A0A178W346/194-241_370-430          ---SDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNILV
A0A384LH87/194-241_370-430          ---SDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNILV
A0A178W2X8/324-371_500-560          ---SDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLTLQDLKMIHKKWFKPEEASALRIKIWNILV
V4KE68/329-379_509-569              YPSRDDPDFVQVCLKDLECLGPQEFLTSPVMNFYIRFLQQQVSAANQISADIQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKKWFRPDEASALRIRIRNTLI
A0A1J3H0G3/338-388_519-579          YPSRDDPHFVQVCLKDLECLAPTEFLTSPVMNFYIRFLQQQVSSDNQISVDIQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKKWFRPDEASALRIKIRNTLI
R0HWU3/339-389_519-579              YPSRDDPNFVQVCLKDLECLAPREFLTSPVMNFYIRFLQQQISSSNEISADIQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLGMFDKKWFKPDEASALRIKIRNTLI
D7KXB3/343-393_523-583              YPSRDDPHLVQVCLKDLECLAPREFLTSPVMNFYIRFLQQQISSSNQISADIQVPQQKNDFDCGPFVLFFIKRFIEEAPQRLKRKDLRMFDKKWFRPDEASALRIKIRNTLI
#=GC scorecons                      2215955569995999959959497999996999897696674756555767999999999999596999969999999999546995955999979699999998959596
#=GC scorecons_70                   ____*___****_****_**_*_*******************_*_*___***************_*****************__***_*__****************_*_**
#=GC scorecons_80                   ____*____***_****_**_*_*******_******_*__*_*_____*__************_*_****_**********___**_*__****_*_*********_*_*_
#=GC scorecons_90                   ____*____***_****_**_*_*_*****_***_*__*_____________************_*_****_**********___**_*__****_*_*********_*_*_
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