# STOCKHOLM 1.0
#=GF ID 1.10.375.10/FF/000003
#=GF DE Gag polyprotein
#=GF AC 1.10.375.10/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.304
#=GS 1p7nA00/1-176   AC P03322
#=GS 1p7nA00/1-176   OS Rous sarcoma virus - Prague C
#=GS 1p7nA00/1-176   DE Gag polyprotein
#=GS 1p7nA00/1-176   DR CATH; 1p7n; A:-28-147; 
#=GS 1p7nA00/1-176   DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS O92956/212-386  AC O92956
#=GS O92956/212-386  OS Rous sarcoma virus - Schmidt-Ruppin B
#=GS O92956/212-386  DE Gag-Pol polyprotein
#=GS O92956/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS O92956/212-386  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS Q9I874/217-391  AC Q9I874
#=GS Q9I874/217-391  OS Lagopus lagopus
#=GS Q9I874/217-391  DE Gag polyprotein
#=GS Q9I874/217-391  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus; Lagopus lagopus; 
#=GS P06444/212-386  AC P06444
#=GS P06444/212-386  OS Avian myelocytomatosis virus hbi
#=GS P06444/212-386  DE Gag polyprotein
#=GS P06444/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Avian myelocytomatosis virus hbi; 
#=GS P03323/212-386  AC P03323
#=GS P03323/212-386  OS Avian myelocytomatosis virus 29
#=GS P03323/212-386  DE Gag polyprotein
#=GS P03323/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian myelocytomatosis virus 29; 
#=GS Q98WV8/212-386  AC Q98WV8
#=GS Q98WV8/212-386  OS Avian leukosis virus
#=GS Q98WV8/212-386  DE Gag polyprotein
#=GS Q98WV8/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; 
#=GS Q9I9X1/214-388  AC Q9I9X1
#=GS Q9I9X1/214-388  OS Colinus virginianus
#=GS Q9I9X1/214-388  DE Gag polyprotein
#=GS Q9I9X1/214-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Colinus; Colinus virginianus; 
#=GS Q9I9T1/232-404  AC Q9I9T1
#=GS Q9I9T1/232-404  OS Perdix perdix
#=GS Q9I9T1/232-404  DE Gag polyprotein
#=GS Q9I9T1/232-404  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Perdix; Perdix perdix; 
#=GS Q9I9S1/215-389  AC Q9I9S1
#=GS Q9I9S1/215-389  OS Tympanuchus cupido attwateri
#=GS Q9I9S1/215-389  DE Gag polyprotein
#=GS Q9I9S1/215-389  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus; Tympanuchus cupido; Tympanuchus cupido attwateri; 
#=GS Q9I9W6/182-356  AC Q9I9W6
#=GS Q9I9W6/182-356  OS Falcipennis canadensis
#=GS Q9I9W6/182-356  DE Gag polyprotein
#=GS Q9I9W6/182-356  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Falcipennis; Falcipennis canadensis; 
#=GS Q9I9Z1/179-353  AC Q9I9Z1
#=GS Q9I9Z1/179-353  OS Tetrastes sewerzowi
#=GS Q9I9Z1/179-353  DE Gag polyprotein
#=GS Q9I9Z1/179-353  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tetrastes; Tetrastes sewerzowi; 
#=GS Q9I9Z9/221-395  AC Q9I9Z9
#=GS Q9I9Z9/221-395  OS Bambusicola thoracicus
#=GS Q9I9Z9/221-395  DE Gag polyprotein
#=GS Q9I9Z9/221-395  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Bambusicola; Bambusicola thoracicus; 
#=GS Q9I9U1/214-388  AC Q9I9U1
#=GS Q9I9U1/214-388  OS Lagopus leucura
#=GS Q9I9U1/214-388  DE Gag polyprotein
#=GS Q9I9U1/214-388  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus; Lagopus leucura; 
#=GS Q9I9W7/223-397  AC Q9I9W7
#=GS Q9I9W7/223-397  OS Falcipennis canadensis
#=GS Q9I9W7/223-397  DE Gag polyprotein
#=GS Q9I9W7/223-397  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Falcipennis; Falcipennis canadensis; 
#=GS Q04095/212-386  AC Q04095
#=GS Q04095/212-386  OS Rous sarcoma virus (strain Schmidt-Ruppin A)
#=GS Q04095/212-386  DE Gag-Pol polyprotein
#=GS Q04095/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q04095/212-386  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS P03354/212-386  AC P03354
#=GS P03354/212-386  OS Rous sarcoma virus - Prague C
#=GS P03354/212-386  DE Gag-Pol polyprotein
#=GS P03354/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS P03354/212-386  DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS P03322/212-386  AC P03322
#=GS P03322/212-386  OS Rous sarcoma virus - Prague C
#=GS P03322/212-386  DE Gag polyprotein
#=GS P03322/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS Q77YH0/212-386  AC Q77YH0
#=GS Q77YH0/212-386  OS Rous sarcoma virus - Prague C
#=GS Q77YH0/212-386  DE Gag polyprotein
#=GS Q77YH0/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS P0C776/212-386  AC P0C776
#=GS P0C776/212-386  OS Rous sarcoma virus (strain Schmidt-Ruppin A)
#=GS P0C776/212-386  DE Gag polyprotein
#=GS P0C776/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GS O92954/212-386  AC O92954
#=GS O92954/212-386  OS Rous sarcoma virus - Schmidt-Ruppin B
#=GS O92954/212-386  DE Gag polyprotein
#=GS O92954/212-386  DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; 
#=GF SQ 20
1p7nA00/1-176           GPTSPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
O92956/212-386          G-LAPGPALTDWARIREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
Q9I874/217-391          D-SAPGPALTDWARIREELTTAGPPVMAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILAPAQYALWSDAWDVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQALREVARLA
P06444/212-386          G-LAPGPALTDWARVGEELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRAKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
P03323/212-386          G-QAPGPALTDWARVGEELASTGPPVVAMPVVINTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSRLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
Q98WV8/212-386          G-LAPGPALTDWARIREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQAFREVARLA
Q9I9X1/214-388          D-SAPGPALTDWARIREELTTAGPSVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPVTMAEVEALMSSPLLPHDVTNLMRVILAPAQYALSMDAWSIQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMTGNPEGQAAFLRPGELVAITASALQALREVARLA
Q9I9T1/232-404          ---CHSSALTDWARIREELATAAPSVVAMPVVIKTEGPAWAPLEPKQITRLADTVRTKGLRSPVTMAEVEALMSSPLLPHDVTNLMRVILAPAQYALWSDAWDVQLQTVIAAATRDPRHPANGQRRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQAFREVARLA
Q9I9S1/215-389          G-SAPGPALTDWARIKEELVTAAPSVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSAITIAEVEALMSSPLLPHDVTNLMRVILGPAQYALWMGAWSVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMAGNPEGQAVLLRPGELVAITASALQAFREVARLA
Q9I9W6/182-356          G-SAPGPALTDWARIREELTTAAPSVVAMPVVIKAEGPAWTPLEPKLITRSADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAQYALWMDAWSVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQALREVARLA
Q9I9Z1/179-353          D-SAPGPALTDWARIREELTAAAPTVVAMPVVIKTDGPAWTPLEPKVITRLADTVRTKGLRSPVTMAEVEALMSSSLLPHDVTNLMRVILAPAQYALWLDAWDVQLQAVIAAATRDPRHPANGQRRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQAFREVARLA
Q9I9Z9/221-395          D-PAPGPALTDWARIREELTAAAPSVVAMPVVIKTEGPAWTPLEPKVITRLADTVRTKGLRSPVTIAEVEALMSSSLLPHDVTNLMRVILAPAQYALWSDAWDVQLQTVIAAATRDPRHPANGQRRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQAFREVARLA
Q9I9U1/214-388          D-PAPGPALTDWARIREELTTAAPSVVAMPVVIKTEGPAWTPLEPKLITRLADTVRSKGLRSPITMAEVEAIMSSPLLPHDVTNLMRVILAPAQYALWMDAWDIQLQTVVAAATRDPRHPANGQGRGERTNLDRLNGKADGMAGNPEGQAALLRPGELVAITASALQAFREVARLA
Q9I9W7/223-397          D-SAPGPALTDWARIREELTAAAPSVGAMPVVIKTEGPAWAPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAQYALWMDAWSVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMAGNPEGQAALLRPGELVAITASALQALREVARLA
Q04095/212-386          G-LAPGPALTDWARIREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
P03354/212-386          G-QAPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
P03322/212-386          G-QAPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
Q77YH0/212-386          G-QAPGPALTDWARVREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLNRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
P0C776/212-386          G-LAPGPALTDWARIREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
O92954/212-386          G-LAPGPALTDWARIREELASTGPPVVAMPVVIKTEGPAWTPLEPKLITRLADTVRTKGLRSPITMAEVEALMSSPLLPHDVTNLMRVILGPAPYALWMDAWGVQLQTVIAAATRDPRHPANGQGRGERTNLDRLKGLADGMVGNPQGQAALLRPGELVAITASALQAFREVARLA
#=GC scorecons          50378889999999779996566959799999988899997999996999899999799999879899999899979999999999999969959998689958999898999999999999996999999979989799995999699988999999999999999979999999
#=GC scorecons_70       ___****************__*_*_*****************************************************************_**_********_***************************************_*********************************
#=GC scorecons_80       ___****************____*_*********************_****************************_**************_**_****_***_*********************_*****************_***_*****************************
#=GC scorecons_90       _____*********__***____*_*_*************_*****_*********_******_*_*********_**************_**_***__***_*********************_*******_****_****_***_*********************_*******
//