# STOCKHOLM 1.0
#=GF ID 1.10.357.120/FF/000002
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 1.10.357.120/FF/000002
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.088
#=GS 4c2mP08/1054-1180     AC P10964
#=GS 4c2mP08/1054-1180     OS Saccharomyces cerevisiae S288C
#=GS 4c2mP08/1054-1180     DE DNA-directed RNA polymerase I subunit RPA190
#=GS 4c2mP08/1054-1180     DR CATH; 4c2m; P:1054-1180; 
#=GS 4c2mP08/1054-1180     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4c2mP08/1054-1180     DR GO; GO:0001054; GO:0005515; GO:0005730; GO:0005736; GO:0006360; GO:0042790; GO:1990841; 
#=GS 4c2mP08/1054-1180     DR EC; 2.7.7.6; 
#=GS P15398/1067-1189      AC P15398
#=GS P15398/1067-1189      OS Schizosaccharomyces pombe 972h-
#=GS P15398/1067-1189      DE DNA-directed RNA polymerase I subunit rpa1
#=GS P15398/1067-1189      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS P15398/1067-1189      DR GO; GO:0005515; GO:0005730; GO:0005736; GO:0005829; GO:0006360; 
#=GS P15398/1067-1189      DR EC; 2.7.7.6; 
#=GS 4c2mA08/1054-1180     AC P10964
#=GS 4c2mA08/1054-1180     OS Saccharomyces cerevisiae S288C
#=GS 4c2mA08/1054-1180     DE DNA-directed RNA polymerase I subunit RPA190
#=GS 4c2mA08/1054-1180     DR CATH; 4c2m; A:1054-1180; 
#=GS 4c2mA08/1054-1180     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4c2mA08/1054-1180     DR GO; GO:0001054; GO:0005515; GO:0005730; GO:0005736; GO:0006360; GO:0042790; GO:1990841; 
#=GS 4c2mA08/1054-1180     DR EC; 2.7.7.6; 
#=GS P10964/1054-1180      AC P10964
#=GS P10964/1054-1180      OS Saccharomyces cerevisiae S288C
#=GS P10964/1054-1180      DE DNA-directed RNA polymerase I subunit RPA190
#=GS P10964/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P10964/1054-1180      DR GO; GO:0001054; GO:0005515; GO:0005730; GO:0005736; GO:0006360; GO:0042790; GO:1990841; 
#=GS P10964/1054-1180      DR EC; 2.7.7.6; 
#=GS Q0U0A2/1032-1156      AC Q0U0A2
#=GS Q0U0A2/1032-1156      OS Parastagonospora nodorum SN15
#=GS Q0U0A2/1032-1156      DE DNA-directed RNA polymerase subunit
#=GS Q0U0A2/1032-1156      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS A0A1H6PZR1/1019-1150  AC A0A1H6PZR1
#=GS A0A1H6PZR1/1019-1150  OS Yarrowia lipolytica
#=GS A0A1H6PZR1/1019-1150  DE DNA-directed RNA polymerase subunit
#=GS A0A1H6PZR1/1019-1150  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS A0A1D8PEX3/1036-1169  AC A0A1D8PEX3
#=GS A0A1D8PEX3/1036-1169  OS Candida albicans SC5314
#=GS A0A1D8PEX3/1036-1169  DE DNA-directed RNA polymerase subunit
#=GS A0A1D8PEX3/1036-1169  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS Q759A3/1034-1160      AC Q759A3
#=GS Q759A3/1034-1160      OS Eremothecium gossypii ATCC 10895
#=GS Q759A3/1034-1160      DE DNA-directed RNA polymerase subunit
#=GS Q759A3/1034-1160      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XEU0/1034-1160      AC R9XEU0
#=GS R9XEU0/1034-1160      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XEU0/1034-1160      DE DNA-directed RNA polymerase subunit
#=GS R9XEU0/1034-1160      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS A0A0L8VH35/1054-1180  AC A0A0L8VH35
#=GS A0A0L8VH35/1054-1180  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VH35/1054-1180  DE DNA-directed RNA polymerase subunit
#=GS A0A0L8VH35/1054-1180  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8VH35/1054-1180  DR EC; 2.7.7.6; 
#=GS B6K3G0/1045-1166      AC B6K3G0
#=GS B6K3G0/1045-1166      OS Schizosaccharomyces japonicus yFS275
#=GS B6K3G0/1045-1166      DE DNA-directed RNA polymerase subunit
#=GS B6K3G0/1045-1166      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces japonicus; 
#=GS S9W8A4/1054-1176      AC S9W8A4
#=GS S9W8A4/1054-1176      OS Schizosaccharomyces cryophilus OY26
#=GS S9W8A4/1054-1176      DE DNA-directed RNA polymerase subunit
#=GS S9W8A4/1054-1176      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces cryophilus; 
#=GS S9REC3/1067-1189      AC S9REC3
#=GS S9REC3/1067-1189      OS Schizosaccharomyces octosporus yFS286
#=GS S9REC3/1067-1189      DE DNA-directed RNA polymerase subunit
#=GS S9REC3/1067-1189      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces octosporus; 
#=GS B9W974/1029-1162      AC B9W974
#=GS B9W974/1029-1162      OS Candida dubliniensis CD36
#=GS B9W974/1029-1162      DE DNA-directed RNA polymerase subunit
#=GS B9W974/1029-1162      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS J8LHJ7/1056-1182      AC J8LHJ7
#=GS J8LHJ7/1056-1182      OS Saccharomyces arboricola H-6
#=GS J8LHJ7/1056-1182      DE DNA-directed RNA polymerase subunit
#=GS J8LHJ7/1056-1182      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS A0A0L8RBK7/1054-1180  AC A0A0L8RBK7
#=GS A0A0L8RBK7/1054-1180  OS Saccharomyces eubayanus
#=GS A0A0L8RBK7/1054-1180  DE DNA-directed RNA polymerase subunit
#=GS A0A0L8RBK7/1054-1180  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C7GNS5/1054-1180      AC C7GNS5
#=GS C7GNS5/1054-1180      OS Saccharomyces cerevisiae JAY291
#=GS C7GNS5/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS C7GNS5/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GNS5/1054-1180      DR EC; 2.7.7.6; 
#=GS A6ZPH1/1054-1180      AC A6ZPH1
#=GS A6ZPH1/1054-1180      OS Saccharomyces cerevisiae YJM789
#=GS A6ZPH1/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS A6ZPH1/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZPH1/1054-1180      DR EC; 2.7.7.6; 
#=GS N1P3V0/1054-1180      AC N1P3V0
#=GS N1P3V0/1054-1180      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P3V0/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS N1P3V0/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P3V0/1054-1180      DR EC; 2.7.7.6; 
#=GS Q6C1S4/1019-1150      AC Q6C1S4
#=GS Q6C1S4/1019-1150      OS Yarrowia lipolytica CLIB122
#=GS Q6C1S4/1019-1150      DE DNA-directed RNA polymerase subunit
#=GS Q6C1S4/1019-1150      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS C4YCY1/948-1081       AC C4YCY1
#=GS C4YCY1/948-1081       OS Candida albicans WO-1
#=GS C4YCY1/948-1081       DE DNA-directed RNA polymerase I 190 kDa polypeptide
#=GS C4YCY1/948-1081       DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS B3LK00/1054-1180      AC B3LK00
#=GS B3LK00/1054-1180      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LK00/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS B3LK00/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WNK3/1054-1180      AC G2WNK3
#=GS G2WNK3/1054-1180      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WNK3/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS G2WNK3/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZH93/1054-1180      AC C8ZH93
#=GS C8ZH93/1054-1180      OS Saccharomyces cerevisiae EC1118
#=GS C8ZH93/1054-1180      DE DNA-directed RNA polymerase subunit
#=GS C8ZH93/1054-1180      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF SQ 24
4c2mP08/1054-1180             AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
P15398/1067-1189              SLDVTKQKHLTQFEFSAKNYKSLIQKYKVKSVLSAVDSETASSYAKKALKKPYK------------YDPVLDKYPPSRYLGSVSEKFQRAVDEYTQKNPDKLIASK--KESKLDDSLLNESKFKALMQLRYQQSLVD
4c2mA08/1054-1180             AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
P10964/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
Q0U0A2/1032-1156              GLDITKQKYLNDFKFQAENFLSLAQTLQTQAAFGRVWSPEATEHNKKASKKARK-------GDITSMDPALALYEPSRHSGSTSEKFYQAKREYTEKNPDKLLKHK--KKD--PEGEILKKSFEQMLDLKYLRSLV-
A0A1H6PZR1/1019-1150          SVDVIKESHLQQFDFCVENFQAMVHKHQPGGNVDNLDTDTAIEYAKKAKKKAKKATSDAELP-----EPTISLYNPAKYLGSVSEEFSNSLEAYIASRPDVFPPKKSGKKSTYADQGVTEKKFRSLMQLKYMQSTVN
A0A1D8PEX3/1036-1169          AVDTTKQSHMNQFKFCVDNYDALLTKYNPGDMTENIDTDLALSYSKKVRKSLKKQKDVPHYDQVIKYDPVLNVYNPAKYLGSVSEKFQEKLDTYVSKNPTIFAQSK--EETK-STGKITEKKFRALMQLKYMRSLIN
Q759A3/1034-1160              AIDVTKESHMSEFKFCVDNYDALLKRYNPSALIQHLDVESALKYSKKAMKNRKKNLNLPHYARHDKYDPVLSKYNPSKFLGSVSENFQDKLESFIDSNASLFK----------GQATVNEKKFRALMQLKYMRSLIN
R9XEU0/1034-1160              AIDVTKESHMSEFRFCVDNYDALLKRYNPSALIQHLDVESALKYSKKAMKNRKKNSKLPHYARQDKYDPVLSKYNPSKFLGSVSENFQDKLEGFIDSNASLFK----------GKATVNEKKFRALMQLKYMRSLIN
A0A0L8VH35/1054-1180          AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
B6K3G0/1045-1166              ALDVTKQKHLYQFEFSARNYKSLIQKYKVKSVLSAVDSDTASSYAKKALKKPHK------------YDPVLDKYPPSRYLGSVSEKFQKAVDEYTKKNPDNLIASK--KESKQDGTLLNESKFKALMQLRYQQSLV-
S9W8A4/1054-1176              SLDVTKQKHLTQFEFSARNYKSLIQKYKVKSVLSAVDSEKASSYAKKALKKPHK------------YDPVLDKYPPSRYLGSVSEKFQRAVDDYTQKNPDKLIASK--KESKQDESLLNEAKFKALMQLRYQQSLVD
S9REC3/1067-1189              SLDVTKQKHLTQFEFSARNYKSLIQKYKVKSVLSAVDSEKASSYAKKALKKPHK------------YDPVLDKYPPSRYLGSVSEKFQRAVDDYTQKNPDKLIAGK--KESKQDESLLNEAKFKALMQLRYQQSLVD
B9W974/1029-1162              AVDTTKQSHMNQFKFCVDNYDALLTKYNPGDMTENIDTDLAMSYSKKVRKSLKKQNDIPHYDQVIKYDPVLNVYNPAKYLGSVSEKFQEKLDTYVSKNPTVFAQSK--EEAK-STGKITEKKFRALMQLKYMRSLIN
J8LHJ7/1056-1182              AVDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRRKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SADGVNEKKFRALMQLKYMRSLIN
A0A0L8RBK7/1054-1180          AVDITKESHMTQFEFCLENYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSIKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SADGVNEKKFRALMQLKYMRSLIN
C7GNS5/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
A6ZPH1/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
N1P3V0/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
Q6C1S4/1019-1150              SVDVIKESHLQQFDFCVENFQAMVHKHQPGGNVDNLDTDTAIEYAKKAKKKAKKATSDAELP-----EPTISLYNPAKYLGSVSEEFSNSLEAYIASRPDVFPPKKSGKKSTYADQGVTEKKFRSLMQLKYMQSTVN
C4YCY1/948-1081               AVDTTKQSHMNQFKFCVDNYDALLTKYNPGDMTENIDTDLALSYSKKVRKSLKKQKDVPHYDQVIKYDPVLNVYNPAKYLGSVSEKFQEKLDTYVSKNPTIFAQSK--EEAK-STGKITEKKFRALMQLKYMRSLIN
B3LK00/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSEKFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
G2WNK3/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
C8ZH93/1054-1180              AIDITKESHMTQFEFCLDNYYALLKKYNPSALIEHLDVESALKYSKKTLKYRKKHSKEPHYKQSVKYDPVLAKYNPAKYLGSVSENFQDKLESFLDKNSKLFK----------SSDGVNEKKFRALMQLKYMRSLIN
#=GC scorecons                65967966864795965598368557755454554674649448599549446922223332212358967459596787998995964566474467544631120021110434365868966888979569775
#=GC scorecons_70             __*_***_**_**_*___**_**__**_________*_*_*__*_**__*___*_____________****__*_*_********_**___*_*__**___*_________________************_****_
#=GC scorecons_80             __*_**__*__**_*___**__*__**_________*___*__*_**__*___*_____________**_*__*_*_********_*______*___*_____________________*_**__******__**__
#=GC scorecons_90             __*__*__*___*_*___*_____________________*__*_**__*___*_____________**____*_*____*****_*________________________________*__*__****_*__*___
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