# STOCKHOLM 1.0
#=GF ID 1.10.340.70/FF/000009
#=GF DE Gag-Pol polyprotein
#=GF AC 1.10.340.70/FF/000009
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 37.187
#=GS 4nzgD00/1-100       AC P03355
#=GS 4nzgD00/1-100       OS Moloney murine leukemia virus isolate Shinnick
#=GS 4nzgD00/1-100       DE Gag-Pol polyprotein
#=GS 4nzgD00/1-100       DR CATH; 4nzg; D:12-104; 
#=GS 4nzgD00/1-100       DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS 4nzgD00/1-100       DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; 
#=GS 4nzgD00/1-100       DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS A1Z651/1334-1433    AC A1Z651
#=GS A1Z651/1334-1433    OS Xenotropic MuLV-related virus VP62
#=GS A1Z651/1334-1433    DE Gag-Pol polyprotein
#=GS A1Z651/1334-1433    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; 
#=GS A1Z651/1334-1433    DR GO; GO:0042802; 
#=GS A1Z651/1334-1433    DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS Q8UN00/1336-1435    AC Q8UN00
#=GS Q8UN00/1336-1435    OS Moloney murine leukemia virus
#=GS Q8UN00/1336-1435    DE Pr180 Gag-Pro-Pol polyprotein
#=GS Q8UN00/1336-1435    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS Q8UN00/1336-1435    DR GO; GO:0005515; 
#=GS 4nzgC00/1-100       AC P03355
#=GS 4nzgC00/1-100       OS Moloney murine leukemia virus isolate Shinnick
#=GS 4nzgC00/1-100       DE Gag-Pol polyprotein
#=GS 4nzgC00/1-100       DR CATH; 4nzg; C:12-104; 
#=GS 4nzgC00/1-100       DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS 4nzgC00/1-100       DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; 
#=GS 4nzgC00/1-100       DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS 4nzgB00/1-100       AC P03355
#=GS 4nzgB00/1-100       OS Moloney murine leukemia virus isolate Shinnick
#=GS 4nzgB00/1-100       DE Gag-Pol polyprotein
#=GS 4nzgB00/1-100       DR CATH; 4nzg; B:12-104; 
#=GS 4nzgB00/1-100       DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS 4nzgB00/1-100       DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; 
#=GS 4nzgB00/1-100       DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS 4nzgA00/1-100       AC P03355
#=GS 4nzgA00/1-100       OS Moloney murine leukemia virus isolate Shinnick
#=GS 4nzgA00/1-100       DE Gag-Pol polyprotein
#=GS 4nzgA00/1-100       DR CATH; 4nzg; A:12-104; 
#=GS 4nzgA00/1-100       DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS 4nzgA00/1-100       DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; 
#=GS 4nzgA00/1-100       DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS A0A0P6CJ31/106-205  AC A0A0P6CJ31
#=GS A0A0P6CJ31/106-205  OS Daphnia magna
#=GS A0A0P6CJ31/106-205  DE Pol protein
#=GS A0A0P6CJ31/106-205  DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; 
#=GS P03355/1336-1435    AC P03355
#=GS P03355/1336-1435    OS Moloney murine leukemia virus isolate Shinnick
#=GS P03355/1336-1435    DE Gag-Pol polyprotein
#=GS P03355/1336-1435    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS P03355/1336-1435    DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; 
#=GS P03355/1336-1435    DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS Q2F7J3/1334-1433    AC Q2F7J3
#=GS Q2F7J3/1334-1433    OS Xenotropic MuLV-related virus VP35
#=GS Q2F7J3/1334-1433    DE Gag-Pol polyprotein
#=GS Q2F7J3/1334-1433    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; 
#=GS Q2F7J3/1334-1433    DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS Q2F7J0/1334-1433    AC Q2F7J0
#=GS Q2F7J0/1334-1433    OS Xenotropic MuLV-related virus VP42
#=GS Q2F7J0/1334-1433    DE Gag-Pol polyprotein
#=GS Q2F7J0/1334-1433    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; 
#=GS Q2F7J0/1334-1433    DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS D0UFA3/1334-1433    AC D0UFA3
#=GS D0UFA3/1334-1433    OS Xenotropic MuLV-related virus
#=GS D0UFA3/1334-1433    DE Putative gag-pro-pol polyprotein
#=GS D0UFA3/1334-1433    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; 
#=GS D0UFA3/1334-1433    DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS Q9E7M1/1334-1433    AC Q9E7M1
#=GS Q9E7M1/1334-1433    OS DG-75 Murine leukemia virus
#=GS Q9E7M1/1334-1433    DE Putative gag-pro-pol polyprotein
#=GS Q9E7M1/1334-1433    DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GS T2AUF0/467-566      AC T2AUF0
#=GS T2AUF0/467-566      OS PreXMRV-1/PreXMRV-2 recombinant
#=GS T2AUF0/467-566      DE Gag-pro-pol polyprotein
#=GS T2AUF0/467-566      DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; 
#=GS Q9E007/307-406      AC Q9E007
#=GS Q9E007/307-406      OS Murine leukemia virus
#=GS Q9E007/307-406      DE Polyprotein
#=GS Q9E007/307-406      DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; 
#=GF SQ 14
4nzgD00/1-100               SHTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
A1Z651/1334-1433            PYTPPHFHYTETDLKRLRELGATYNQTKGYWVLQGKPVMPDQSVFELLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTIQYVTETCTACAQVNASKA
Q8UN00/1336-1435            PYTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKTKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
4nzgC00/1-100               SHTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
4nzgB00/1-100               SHTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
4nzgA00/1-100               SHTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
A0A0P6CJ31/106-205          PYTPSHFHYTETDLKRLRELGATYNQIKGYWVLQGKPVMPDQFVFKLLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTLQYVAESCTACAQVNASKA
P03355/1336-1435            PYTSEHFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKALLERSHSPYYMLNRDRTLKNITETCKACAQVNASKS
Q2F7J3/1334-1433            PYTPPHFHYTETDLKRLRELGATYNQTKGYWVLQGKPVMPDQSVFELLDSLHRLTHPSPQKMKALLDREESPYYMLNRDRTIQYVTETCTACAQVNASKA
Q2F7J0/1334-1433            PYTPPHFHYTETDLKRLRELGATYNQTKGYWVLQGKPVMPDQSVFELLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTIQYVTETCTACAQVNASKA
D0UFA3/1334-1433            PYTPPHFHYTETDLKRLRELGATYNQTKGYWVLQGKPVMPDQSVFELLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTIQYVTETCTACAQVNASKA
Q9E7M1/1334-1433            PYTPSHFHYTETDLKRLRELGATYNQIKGYWVLQGKPVMPDQFVFELLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTLQYVAESCTACAQVNASKA
T2AUF0/467-566              PYTPPHFHYTETDLKRLRELGATYNQTKGYWVLQGKPVMPDQSVFELLDSLHRLTHLSPQKMKALLDREESPYYMLNRDRTIQYVTETCTACAQVNASKA
Q9E007/307-406              PYTHEHFHYTVTDIKDLTKLGATYDSAKKYWVYQGKRVMPDQFTFGLLDFLHQMTHLSFSKTKALLERSPSPYYMLNRDRTLKNITETCKACAQVNASKS
#=GC scorecons              6795499999599695956999696569599959997999995597999599689989559799997955999999999996657797959999999996
#=GC scorecons_70           ***__*****_****_*__***_**_**_***_*********__*****_********__********__*************_*****_*********_
#=GC scorecons_80           _**__*****_**_*_*__***_*___*_***_*********__*****_**_*****__******_*__***********____****_*********_
#=GC scorecons_90           __*__*****_**_*_*__***_*___*_***_***_*****__*_***_**_*****__*_****_*__***********_____*_*_*********_
//