# STOCKHOLM 1.0
#=GF ID 1.10.3380.10/FF/000017
#=GF DE U5 small nuclear ribonucleoprotein helicase
#=GF AC 1.10.3380.10/FF/000017
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 46.700
#=GS D0NTD6/1950-2088      AC D0NTD6
#=GS D0NTD6/1950-2088      OS Phytophthora infestans T30-4
#=GS D0NTD6/1950-2088      DE Pre-mRNA-splicing helicase BRR2, putative
#=GS D0NTD6/1950-2088      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS B5YNG2/1749-1885      AC B5YNG2
#=GS B5YNG2/1749-1885      OS Thalassiosira pseudonana
#=GS B5YNG2/1749-1885      DE RNA or DNA helicase
#=GS B5YNG2/1749-1885      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS A0A0N7L658/1910-2048  AC A0A0N7L658
#=GS A0A0N7L658/1910-2048  OS Plasmopara halstedii
#=GS A0A0N7L658/1910-2048  DE U5 small nuclear ribonucleoprotein 200 kDa helicase-like
#=GS A0A0N7L658/1910-2048  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS G4Z9P5/1955-2093      AC G4Z9P5
#=GS G4Z9P5/1955-2093      OS Phytophthora sojae strain P6497
#=GS G4Z9P5/1955-2093      DE Uncharacterized protein
#=GS G4Z9P5/1955-2093      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A329SWA5/1954-2092  AC A0A329SWA5
#=GS A0A329SWA5/1954-2092  OS Phytophthora cactorum
#=GS A0A329SWA5/1954-2092  DE U5 small nuclear ribonucleoprotein helicase
#=GS A0A329SWA5/1954-2092  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS W2K423/1952-2090      AC W2K423
#=GS W2K423/1952-2090      OS Phytophthora parasitica
#=GS W2K423/1952-2090      DE Uncharacterized protein
#=GS W2K423/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A3R7NN02/1920-2058  AC A0A3R7NN02
#=GS A0A3R7NN02/1920-2058  OS Phytophthora kernoviae
#=GS A0A3R7NN02/1920-2058  DE Uncharacterized protein
#=GS A0A3R7NN02/1920-2058  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS A0A0W8BYE6/1952-2090  AC A0A0W8BYE6
#=GS A0A0W8BYE6/1952-2090  OS Phytophthora nicotianae
#=GS A0A0W8BYE6/1952-2090  DE U5 small nuclear ribonucleoprotein
#=GS A0A0W8BYE6/1952-2090  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS H3G6V1/1781-1919      AC H3G6V1
#=GS H3G6V1/1781-1919      OS Phytophthora ramorum
#=GS H3G6V1/1781-1919      DE Uncharacterized protein
#=GS H3G6V1/1781-1919      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS K0TJS1/1653-1789      AC K0TJS1
#=GS K0TJS1/1653-1789      OS Thalassiosira oceanica
#=GS K0TJS1/1653-1789      DE Uncharacterized protein
#=GS K0TJS1/1653-1789      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira oceanica; 
#=GS W2QTR9/1952-2090      AC W2QTR9
#=GS W2QTR9/1952-2090      OS Phytophthora parasitica INRA-310
#=GS W2QTR9/1952-2090      DE Uncharacterized protein
#=GS W2QTR9/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9E1G1/1952-2090      AC V9E1G1
#=GS V9E1G1/1952-2090      OS Phytophthora parasitica P1569
#=GS V9E1G1/1952-2090      DE Uncharacterized protein
#=GS V9E1G1/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8DGX4/1947-2085  AC A0A0W8DGX4
#=GS A0A0W8DGX4/1947-2085  OS Phytophthora nicotianae
#=GS A0A0W8DGX4/1947-2085  DE Proteasomal ATPase-associated factor 1
#=GS A0A0W8DGX4/1947-2085  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS W2FT43/1952-2090      AC W2FT43
#=GS W2FT43/1952-2090      OS Phytophthora parasitica
#=GS W2FT43/1952-2090      DE Uncharacterized protein
#=GS W2FT43/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2VX61/1952-2090      AC W2VX61
#=GS W2VX61/1952-2090      OS Phytophthora parasitica CJ01A1
#=GS W2VX61/1952-2090      DE Uncharacterized protein
#=GS W2VX61/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A080Z4V0/1952-2090  AC A0A080Z4V0
#=GS A0A080Z4V0/1952-2090  OS Phytophthora parasitica P1976
#=GS A0A080Z4V0/1952-2090  DE Uncharacterized protein
#=GS A0A080Z4V0/1952-2090  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2Y7E2/1952-2090      AC W2Y7E2
#=GS W2Y7E2/1952-2090      OS Phytophthora parasitica P10297
#=GS W2Y7E2/1952-2090      DE Uncharacterized protein
#=GS W2Y7E2/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2MBY8/1952-2090      AC W2MBY8
#=GS W2MBY8/1952-2090      OS Phytophthora parasitica
#=GS W2MBY8/1952-2090      DE Uncharacterized protein
#=GS W2MBY8/1952-2090      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GF SQ 18
D0NTD6/1950-2088              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQAHFSKQHDRLSPALRQDLDFVLRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
B5YNG2/1749-1885              -AYYYVQYETIELIAASLTAKTKVRGILEILSHASEFSSLPIRQGEEKALQILARNLPSKLPDSAQFQDPRTKALVLLHCHFSRK--ALSSDLRTDQKQVLCESINLIPAIVDVISSNGWLKPALAAMELSQMVVQGLWN
A0A0N7L658/1910-2048          AAYYYIKYTTIELFACSLKADSKMRALLIILSSASEFSDLPSRHGEDKKLETLAKHLKFPVAAGGDYGQAHVKTNVLLQVHFSKQHDHLSPALRQDLNFILRHAIRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
G4Z9P5/1955-2093              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQAHVKTNVLLQAHFSKQHDRLSPALRQDLDFILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
A0A329SWA5/1954-2092          AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQAHVKTNVLLQVHFSKQHDRLSPALRQDLDFILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
W2K423/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
A0A3R7NN02/1920-2058          AAYYYIKYTTIELFACSLKSDSKVRALLTILASATEFSDLPSRYGEDKKLESLAKHLKFPVAAGGDYGQAHVKTNVLLQVHFSKQHDRLSPALRQDLDFILRHAVRLLHAMVDVISSNGWLKPALAAMDLTQMVVQAQW-
A0A0W8BYE6/1952-2090          AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
H3G6V1/1781-1919              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFSVAAGGDYGQAHVKANVLLQVHFSKQHDRLSPALRQDLDLILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
K0TJS1/1653-1789              -AYYYVQYETIELIAASLTAKTKVRGILEILSHASEFGTLPIRQGEEKALRILARTLPSKLPDSAQFSDPRTKALVLLNCHFSRK--PLSTDLRTDQKRVLCDSINLIPAIVDVISSNGWLKPALAAMELSQMVVQGLWN
W2QTR9/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
V9E1G1/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPYVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
A0A0W8DGX4/1947-2085          AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
W2FT43/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
W2VX61/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
A0A080Z4V0/1952-2090          AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
W2Y7E2/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
W2MBY8/1952-2090              AAYYYIKYTTIELFACSLKADSKVRALLTILSSATEFSDLPSRYGEDKKLEGLAKHLKFPVAAGGDYGQPHVKTNVLLQVHFSKQHDRLSPALRQDLDYILRHAVRLLHAMVDVISSNGWLKPALAAMDLAQMVVQAQW-
#=GC scorecons                39999669599995959958559895694998595996499595996959549965944465555574576596499954999663349955995945369555659659699999999999999999695999995490
#=GC scorecons_70             _*******_****_*_**_*__***_**_***_*_***_**_*_****_*__***_*___*_____*__*__*__***__*****___**__**_*___**___*_**_*********************_*****__*_
#=GC scorecons_80             _****__*_****_*_**_*__***__*_***_*_**__**_*_**_*_*__**__*_________*_____*__***__***_____**__**_*____*_____*__*_*****************_*_*****__*_
#=GC scorecons_90             _****__*_****_*_**_*__***__*_***_*_**__**_*_**_*_*__**__*_______________*__***__***_____**__**_*____*_____*__*_*****************_*_*****__*_
//