# STOCKHOLM 1.0
#=GF ID 1.10.3260.10/FF/000013
#=GF DE DNA ligase
#=GF AC 1.10.3260.10/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 72.536
#=GS Q587E4/54-333       AC Q587E4
#=GS Q587E4/54-333       OS Trypanosoma brucei brucei TREU927
#=GS Q587E4/54-333       DE DNA ligase
#=GS Q587E4/54-333       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q587E4/54-333       DR GO; GO:0005634; 
#=GS B8BW47/1-256        AC B8BW47
#=GS B8BW47/1-256        OS Thalassiosira pseudonana
#=GS B8BW47/1-256        DE DNA ligase
#=GS B8BW47/1-256        DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS F4NXH5/10-239       AC F4NXH5
#=GS F4NXH5/10-239       OS Batrachochytrium dendrobatidis JAM81
#=GS F4NXH5/10-239       DE DNA ligase
#=GS F4NXH5/10-239       DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS Q4Q6U5/40-312       AC Q4Q6U5
#=GS Q4Q6U5/40-312       OS Leishmania major
#=GS Q4Q6U5/40-312       DE DNA ligase
#=GS Q4Q6U5/40-312       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS A4HIT2/126-398      AC A4HIT2
#=GS A4HIT2/126-398      OS Leishmania braziliensis
#=GS A4HIT2/126-398      DE DNA ligase
#=GS A4HIT2/126-398      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A4I634/25-298       AC A4I634
#=GS A4I634/25-298       OS Leishmania infantum
#=GS A4I634/25-298       DE DNA ligase
#=GS A4I634/25-298       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A088RWL9/126-398  AC A0A088RWL9
#=GS A0A088RWL9/126-398  OS Leishmania panamensis
#=GS A0A088RWL9/126-398  DE DNA ligase
#=GS A0A088RWL9/126-398  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS E9B1B9/125-398      AC E9B1B9
#=GS E9B1B9/125-398      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9B1B9/125-398      DE DNA ligase
#=GS E9B1B9/125-398      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A1E1J2E2/126-398  AC A0A1E1J2E2
#=GS A0A1E1J2E2/126-398  OS Leishmania guyanensis
#=GS A0A1E1J2E2/126-398  DE DNA ligase
#=GS A0A1E1J2E2/126-398  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; 
#=GS E9BM92/25-298       AC E9BM92
#=GS E9BM92/25-298       OS Leishmania donovani BPK282A1
#=GS E9BM92/25-298       DE DNA ligase
#=GS E9BM92/25-298       DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 10
Q587E4/54-333               CHASVWPRPQENQKQGPDTVPYAAVADTLADISAESSRLECIRLLSNFLVAVIQ---RNPIDLVPVVYLVINKQGPAHEGIELGVGDALLLKVVAECCGITEARAKEEYRQTGDLAEVAQSKKRIQSTLV-KPKRLTALAVFQALREIALMSGKDVARRRGDVIKRLLRDAVGPEVNLIVRALQQKMRVGLAETSVLAAVGYAFAMSNIGVAKIPSLTPEQ--------------------------LQRELNVGAANLTRTYNEVPCLDVVLAAVLQHGLEVIVPTSAEANMHARALSVRPGIPVKPQL
B8BW47/1-256                --------------------------------------------MTELFRMVLIRDDALRSDLYPLLYLASNSVAPSYECVELGVGDSILVKAIGEASGTNPQMIKKKYEKEGDLGTVAQTSKGKQKTLIGGPKRLDVREVLKVFREIATTSGSQSQKWKVDKIKGLLVRAKGSEAKYIIRGLQGKLRIGLAQSSVLASLSHAIVLTKPKDVVPLTEERLKEIRSIDADEKGAYPDFARKLCAENLPLDVKLETSVAIVKKAYSEVPSFDSLLDALLSAPLQEM----------HKACNLTPGIPVEPML
F4NXH5/10-239               ------------------------------------FRLEIQSILSNFFREVIV---ASPDQLIECVYLCINRICPEYEGKELGIGESLLIKALANASGRDAKSIKAEIDQVGDLGSVAQ-SKGYQKTLF-KPKPLTVTSVFKTLKEICNISGQSSQQRKINIIQKMLVSCQGSEAKYLIRSLEGKLRIGLAEQTVLTSLAHASALNESTTIKMSTEKKA-----------------------------ALLADATVMIKSVYSAIPSYDAIIPVLLKYGFKEL----------STHCHMTPGIPMKPML
Q4Q6U5/40-312               -PAAP---PTAG---ASEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTETRAKEEYRQSGDLAEIAQMHKQKQGTLM-KPKPLSARSVFKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGAQMHKMDEVQ--------------------------LQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKQYAKDLSIRPGLPVKPQL
A4HIT2/126-398              -PAAL---PTAG---ALEPVPFAVVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTESRAKEEYRQSGDLAEIAQMHKQKQSTLM-KPKALSARSVFKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFVGSAQMHTMSEVQ--------------------------LQTLLNSGADSLARIFYEVPSLDVVLSAVLASGFMILVPGSCIAKVHAKELSIRPGLPVKPQL
A4I634/25-298               VPVAP---PTAG---ASEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTEARAKEAYRQSGDLAEIAQMHKQKQSTLM-KPKPLSARSVFKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGAQMHKMDEVQ--------------------------LQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKRYAKDLSIRPGLPVKPQL
A0A088RWL9/126-398          -PAAL---PTAG---ALEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTESRTKEEYRQSGDLAEIAQMHKQKQSTLM-KPKALSARSVFKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFVGSAQMHTMSEVQ--------------------------LQTLLNSGADSLARIFYEVPSLDVVLSAVLASGFMILVPGSCIAKVHAKELSIRPGLPVKPQL
E9B1B9/125-398              VPATA---PTAG---ASEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTEARAKEEYRQSGDLAEIAQMHKQKQSTLM-KPKPLSAQSVFKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGDAQMHQMDVVQ--------------------------LQTLLNTGADSVTRIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKRYAKDLSIRPGLPVKPQL
A0A1E1J2E2/126-398          -PAAL---PTAG---ALEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTESRTKEEYRQSGDLAEIAQMHKQKQSTLM-KPKALSARSVFKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFVGSAQMHTMSEVQ--------------------------LQTLLNSGADSLARIFYEVPSLDVVLSAVLASGFMILVPGSCIAKVHAKELSIRPGLPVKPQL
E9BM92/25-298               VPVAP---PTAG---ASEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIE---RCPEDLVPVMYLVINKHAPQHEGVELGIGDAVLVKAVAECCSMTEARAKEAYRQSGDLAEIAQMHKQKQSTLM-KPKPLSARSVFKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVGYAFALHFLGGAQMHKMDEVQ--------------------------LQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPGSSIAKRYAKDLSIRPGLPVKPQL
#=GC scorecons              0222100032220002122332323232333333223555323276366449730005364695645994695359469659997975596976675584543459556573999546993494494994069949454597745699645994553666474975794465959555769597596989997475975656946742343545344334400000000000000000000000000534495455445454746797595674769436633633231232124534555996976949
#=GC scorecons_70           ____________________________________________*__**__**______*_**_*__**_**___*_***_******__****_**__*______*__*_*_***__***__*__*_**__***_*____***__****__**_____**_*_**_**__*_*_*___***_**_********_*_**_*_**_**_____________________________________________*__________*_****_*__*_***__**__*_________________**_****_*
#=GC scorecons_80           ____________________________________________*______*__________*____**__*___*__*__***_**__*_**_____*______*______***___**__*__*_**___**_*____*_*___**___**________*_**_**____*_*___*_*_**_*_*****____**____*__*_____________________________________________*__________*__***_*__*___*________________________**_**_*_*
#=GC scorecons_90           ___________________________________________________*__________*____**__*___*__*__***_*___*_*______*______*______***___**__*__*_**___**_*____*_____**___**__________*___*____*_*_____*_*__*_*****____*_____*________________________________________________*______________*__*______*________________________**_*__*_*
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