# STOCKHOLM 1.0
#=GF ID 1.10.3210.10/FF/000047
#=GF DE HD domain containing protein
#=GF AC 1.10.3210.10/FF/000047
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.322
#=GS A0CEE8/24-335   AC A0CEE8
#=GS A0CEE8/24-335   OS Paramecium tetraurelia
#=GS A0CEE8/24-335   DE Uncharacterized protein
#=GS A0CEE8/24-335   DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A2E4P3/4-300    AC A2E4P3
#=GS A2E4P3/4-300    OS Trichomonas vaginalis
#=GS A2E4P3/4-300    DE HD domain containing protein
#=GS A2E4P3/4-300    DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS C3YMU6/1-319    AC C3YMU6
#=GS C3YMU6/1-319    OS Branchiostoma floridae
#=GS C3YMU6/1-319    DE Uncharacterized protein
#=GS C3YMU6/1-319    DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS H3GU84/116-453  AC H3GU84
#=GS H3GU84/116-453  OS Phytophthora ramorum
#=GS H3GU84/116-453  DE Uncharacterized protein
#=GS H3GU84/116-453  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A2F5V7/4-300    AC A2F5V7
#=GS A2F5V7/4-300    OS Trichomonas vaginalis
#=GS A2F5V7/4-300    DE HD domain containing protein
#=GS A2F5V7/4-300    DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2GCQ3/6-302    AC A2GCQ3
#=GS A2GCQ3/6-302    OS Trichomonas vaginalis
#=GS A2GCQ3/6-302    DE HD domain containing protein
#=GS A2GCQ3/6-302    DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A2EI16/5-300    AC A2EI16
#=GS A2EI16/5-300    OS Trichomonas vaginalis
#=GS A2EI16/5-300    DE HD domain containing protein
#=GS A2EI16/5-300    DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GF SQ 7
A0CEE8/24-335           EIRKISDPIYDFIYFDQAIWKVIDNPVYQRLRNIKQLGTTSWVFQGANHTRFEHCLGVGHLAQQFITSIYK-NQPY----LDGEEDKRRNIKLVTIAGIVHDLG--HGPFSHMFDNLLI-----PKLTNSSELWCHEQASEMLFNYMYDKYSLGLEK-----------------DEVNFINALVHGDNNKVSNGKKQWFYDIVSNKRNGIDVDRVDYIRRDCHHLGQPPSIKDFQYLMQESRVIDDE--------ICYPQRYAFNIFDLFNTRYKLFKIVYLNRISQCIEQMMCDILLSVNSIY-----K------FDQIIYEPEKYCKLNDSIIEQIDS-AEGPEYAKAQAIIKRLKMRE
A2E4P3/4-300            --HSPQDEVYDPLSIPAYCWPIIDTPEFQRMRYIPQLGTTFWIYPAATHTRFEHCLGVAHLAEKFMINLKI-YQPE----LNIKDEWE---QAVVIAGLCHDIG--HGPWSHCFESVA---------HLFDPTWDHEDSSVNILQNMVKKYNLSLPK-----------------YVYDAACNFIRGKP---YGDFPIWTSQIIANHVTDIDFDKLDYLVRDLNRTFLSARS-DIKRIIYNTRIIDGQ--------LAYRKSETTTLERMFFNRIDMHRRVYQHRVKLALSLMITDMLKAAEPFL-----G------IGKSLNNPDEFIKFDCRLMYLIER-GKCGQ--EAQRLANDIITRK
C3YMU6/1-319            -MQVFNDPIHGSIELPAICVAIIDTPEFQRLRHIKQLGLTCLVYPTAVHTRFDHSIGVCHLADEMVQALRKRHGPKDSRPIDITEEEH---LCVMIAGLCRDLGTSFGPFSHLFDQRFM------RNKEKDYTENNLEKEIKFIQELIDP-----PP-----------------GLWEKTRWFCEGR-----GEDKSYLYLIVKNTLNGIDVAKWDYCARDCHFLGIPNSF-DHQRLLKFSRVLEWGGRS----EICFKFKEAFNLYNLYRMRHVLHMRAYQHSAKNAAEIMFSEALEEVDKSLTIARKDTGLNMLFGEGVDNVHDFLSLTDDIYRRILLCPPHPDIDSARAILQKIDERQ
H3GU84/116-453          ARKEIKDSVHGLMTFEPICMRIIDTLQFQRLRNLHQLGAANFVYIGATHSRFEHCLGVAYFAEKMIETIRS-HQPW----LPITKEDV---LCIKIAGLCHDLG--HGPFSHVFDGLFLDQLREKKLIPGSFKWSHEQGSVDMFDYLLAENKIRLEDYGLAQHDVVFIKELIWGGPLRESKGVLRGRP----SRDQRFLYDIVNNAHSGLDVDKLDYFMRDSLHTGAKMSC-DTDLLIRNARVLVDREDPEEHMVVCFPEKLAGQIMQAFRTRYELHQSVYQHRGVRAIDYMLCDLLIAANDHITIKGKR------FSDIMGSMEAYQHFDDRVLLKIQE-SDGPELQEARAILNRIYSK-
A2F5V7/4-300            --HSPQDEVYGPLSIPAYCWPIIDTPEFQRMRHIPQLGTTSWIYPAATHSRFEHSLGVAHLAQQFMTHLKI-NQPE----LNIKEEWE---HAVVIAGLCHDIG--HGPWSHCFEAVA---------HLFDPTWDHEDNSVRILENMIDKYKLPLPR-----------------YIYEAACNFIRGEP---YENFPVWTSQIIANHVTDIDLDKLDYLARDMNRTFLSARS-DTERLIFNCRITQGE--------LTYRKSETTTIERMFFNRIDMHRRVYQHRVNQALSLMITDMLKEAEPHL-----G------ISTSLNDPNEFIKFDCRLLYLIER-GNCGK--EAQKIANDIITRK
A2GCQ3/6-302            --HSPQDQIYGPLNIPSYCWPIIDTPEYQRLRYVAQLGPVQYVFPSANHSRFEHCLGCAHLASTLMEHFEQ-TQPE----LNIKPEYK---QIVVIASLCHDLG--HGPYSHLFDEIV---------RPSCPTWDHEEMGGEILRYIVKTYNVGIPS-----------------DIIEAACAAIKGEE---YGDYPKWLFHIIADKKFDIDIDKFDYLARDMNRTLHISKF-EYDRLIVNCRITQGK--------LSWRLSEIPTIERLFFNRNDMHNRVYKHRVALSIGAMIENMFQYINEHL-----N------FAELIKDPKEYCKYDDRIIFLAEL-GQFGP--EAQKIAMDIRYRR
A2EI16/5-300            ---SPQDQIYGPLSIPAYCWPIIDTPEFQRLRNVYQLGGVVYVYPGTNHSRFEHSLGCAHLAGVWMNHFKK-TQPE----LNILEKYE---KAVIIAALCHDLG--QGPYSYVFDQAV---------AQENPYWKHSEMSAKILKLINEKYSLNIES-----------------DVLDAACEYIKGDE---YNTFPKYLASIVHNQQCDIDVNKFDYLSRDMNRALNTGSF-IYDRLIYNSRVIDDQ--------LCWKFSEIPTIEMFFYNFNDMAERVYKHRVVQAIELMIMDIFDVFFEKV-----D------ITELTQDPNVFVQYDDRILYSVEL-NEYGE--KAKNISDRIIRRD
#=GC scorecons          0033449367645355436447997757997946399935247754749599795795577943453354304693000074634623000337399676796900599598397333000000010222433637452533553353444242443000000000000000003334343244494200024324255439737323579557499439934443233530634476254974344000000005554244534633483463465347947643355439536462244334000003000000534343454372455556423642033354004954733472272
#=GC scorecons_70       ______*_***_______*__*****_*****___***____**__*_*_****_**__***___________**_____*_*__*_______*_*********___**_**_**____________________*_________________________________________________*_______________**_*____**__*_**__**_______________**___**______________________*___*__*__*___**_**_______*__*_*_____________________________*__________*___________*__*___*__*_
#=GC scorecons_80       ______*______________****__***_*___***____**__*_*_****_**__***____________*_____*____________*_**_*_**_*___**_**_**____________________*_________________________________________________*_______________*__*____**__*_**__**_______________*____*___________________________*_________**_*________*__________________________________*______________________*__*___*__*_
#=GC scorecons_90       ______*_______________**____**_*___***__________*_**_*__*____*____________*____________________**____*_*___**_*__*_______________________________________________________________________*_______________*________*____**__**____________________*______________________________________*__________*_________________________________________________________*___________
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