# STOCKHOLM 1.0 #=GF ID 1.10.3200.20/FF/000003 #=GF DE DNA polymerase #=GF AC 1.10.3200.20/FF/000003 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 80.387 #=GS Q9FHA3/1316-1507 AC Q9FHA3 #=GS Q9FHA3/1316-1507 OS Arabidopsis thaliana #=GS Q9FHA3/1316-1507 DE DNA polymerase alpha catalytic subunit #=GS Q9FHA3/1316-1507 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FHA3/1316-1507 DR GO; GO:0003887; GO:0009965; #=GS Q9FHA3/1316-1507 DR EC; 2.7.7.7; #=GS O48653/1323-1520 AC O48653 #=GS O48653/1323-1520 OS Oryza sativa Japonica Group #=GS O48653/1323-1520 DE DNA polymerase alpha catalytic subunit #=GS O48653/1323-1520 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS O48653/1323-1520 DR GO; GO:0003887; GO:0003896; GO:0005634; GO:0006270; GO:0006273; #=GS O48653/1323-1520 DR EC; 2.7.7.7; #=GS H9E8V2/1353-1547 AC H9E8V2 #=GS H9E8V2/1353-1547 OS Solanum lycopersicum #=GS H9E8V2/1353-1547 DE DNA polymerase #=GS H9E8V2/1353-1547 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS F6H4J7/1314-1507 AC F6H4J7 #=GS F6H4J7/1314-1507 OS Vitis vinifera #=GS F6H4J7/1314-1507 DE DNA polymerase #=GS F6H4J7/1314-1507 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS K7K4M3/1337-1530 AC K7K4M3 #=GS K7K4M3/1337-1530 OS Glycine max #=GS K7K4M3/1337-1530 DE DNA polymerase #=GS K7K4M3/1337-1530 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS R0GEZ1/493-686 AC R0GEZ1 #=GS R0GEZ1/493-686 OS Capsella rubella #=GS R0GEZ1/493-686 DE DNA polymerase #=GS R0GEZ1/493-686 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A1D6N6A8/1311-1508 AC A0A1D6N6A8 #=GS A0A1D6N6A8/1311-1508 OS Zea mays #=GS A0A1D6N6A8/1311-1508 DE DNA polymerase #=GS A0A1D6N6A8/1311-1508 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0D9V896/1292-1490 AC A0A0D9V896 #=GS A0A0D9V896/1292-1490 OS Leersia perrieri #=GS A0A0D9V896/1292-1490 DE DNA polymerase #=GS A0A0D9V896/1292-1490 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0E0JRI1/1166-1363 AC A0A0E0JRI1 #=GS A0A0E0JRI1/1166-1363 OS Oryza punctata #=GS A0A0E0JRI1/1166-1363 DE DNA polymerase #=GS A0A0E0JRI1/1166-1363 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0E0CAU3/1337-1534 AC A0A0E0CAU3 #=GS A0A0E0CAU3/1337-1534 OS Oryza meridionalis #=GS A0A0E0CAU3/1337-1534 DE DNA polymerase #=GS A0A0E0CAU3/1337-1534 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS J3L674/1180-1377 AC J3L674 #=GS J3L674/1180-1377 OS Oryza brachyantha #=GS J3L674/1180-1377 DE DNA polymerase #=GS J3L674/1180-1377 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; #=GS A0A0D9YHY1/1328-1525 AC A0A0D9YHY1 #=GS A0A0D9YHY1/1328-1525 OS Oryza glumipatula #=GS A0A0D9YHY1/1328-1525 DE DNA polymerase #=GS A0A0D9YHY1/1328-1525 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0N5K1/1307-1506 AC A0A0E0N5K1 #=GS A0A0E0N5K1/1307-1506 OS Oryza rufipogon #=GS A0A0E0N5K1/1307-1506 DE DNA polymerase #=GS A0A0E0N5K1/1307-1506 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D3EWR4/1164-1363 AC A0A0D3EWR4 #=GS A0A0D3EWR4/1164-1363 OS Oryza barthii #=GS A0A0D3EWR4/1164-1363 DE DNA polymerase #=GS A0A0D3EWR4/1164-1363 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0FW87/1328-1525 AC A0A0E0FW87 #=GS A0A0E0FW87/1328-1525 OS Oryza sativa f. spontanea #=GS A0A0E0FW87/1328-1525 DE DNA polymerase #=GS A0A0E0FW87/1328-1525 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS B8A6Y4/1321-1518 AC B8A6Y4 #=GS B8A6Y4/1321-1518 OS Oryza sativa Indica Group #=GS B8A6Y4/1321-1518 DE DNA polymerase #=GS B8A6Y4/1321-1518 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0D9V897/1252-1450 AC A0A0D9V897 #=GS A0A0D9V897/1252-1450 OS Leersia perrieri #=GS A0A0D9V897/1252-1450 DE DNA polymerase #=GS A0A0D9V897/1252-1450 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0E0N5K2/1193-1392 AC A0A0E0N5K2 #=GS A0A0E0N5K2/1193-1392 OS Oryza rufipogon #=GS A0A0E0N5K2/1193-1392 DE DNA polymerase #=GS A0A0E0N5K2/1193-1392 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A1D6N6A4/1212-1409 AC A0A1D6N6A4 #=GS A0A1D6N6A4/1212-1409 OS Zea mays #=GS A0A1D6N6A4/1212-1409 DE DNA polymerase #=GS A0A1D6N6A4/1212-1409 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6N6B1/150-347 AC A0A1D6N6B1 #=GS A0A1D6N6B1/150-347 OS Zea mays #=GS A0A1D6N6B1/150-347 DE DNA polymerase alpha catalytic subunit #=GS A0A1D6N6B1/150-347 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6N6A9/720-917 AC A0A1D6N6A9 #=GS A0A1D6N6A9/720-917 OS Zea mays #=GS A0A1D6N6A9/720-917 DE DNA polymerase #=GS A0A1D6N6A9/720-917 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6N6B0/264-461 AC A0A1D6N6B0 #=GS A0A1D6N6B0/264-461 OS Zea mays #=GS A0A1D6N6B0/264-461 DE DNA polymerase alpha catalytic subunit #=GS A0A1D6N6B0/264-461 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6N6A6/1282-1479 AC A0A1D6N6A6 #=GS A0A1D6N6A6/1282-1479 OS Zea mays #=GS A0A1D6N6A6/1282-1479 DE DNA polymerase #=GS A0A1D6N6A6/1282-1479 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7L321/27-196 AC K7L321 #=GS K7L321/27-196 OS Glycine max #=GS K7L321/27-196 DE Uncharacterized protein #=GS K7L321/27-196 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 24 Q9FHA3/1316-1507 ATSDEERYKSCEPLALTCPSCSTAFNCPSIISSVC--ASISKKPATP-ETEESDSTFWLKLHCPKCQQEDSTGIISPAMIANQVKRQIDGFVSMYYKGIMVCEDESCKHTTRSPNFRLLGERERGTVCPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQCSLEKMDVGVRIQVEKAMTKIRPAVKSAAAITRS------- O48653/1323-1520 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- H9E8V2/1353-1547 -ADDEERFRGCEPLTLTCPSCSCSFECAPIFSSIC--SSIRQNPADL-QVGESASKVWERFSCPKCPEES-EGNISSALIANQVKRQVEGFISTYYKGVMMCDDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYFCFVLDTVRCIEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRC-- F6H4J7/1314-1507 -SADEERYRGCEHLILSCPSCFGTFDCPTLFNSVH--TSITEKSTQV-QVEESN-NFWQRLRCPKCPEEGDVGRMSPALIANQVKRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDR--- K7K4M3/1337-1530 -ADDEERYRGCEPLVLSCPSCSGTFDCPPVFKSICLLGSERQRPTSV-APEEAEYNFWRKLCCPKCPDV----KISPVMIANQVKRQAERFILMYYRGLLVCDDETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRLVRKYTEADLYKQLSYFCHVFDTVSCIEKMEAKSRIPIEKELIKIRAVIKSAASTAQEIRDRC-- R0GEZ1/493-686 ATSDEERYKSCEPLALTCPSCSTAFNCPSITSSVC--ASISKRPVTP-ETEKSDSSFWLKLHCPKCQQEDSNGRISPAMIANQVKRQIDGFVSMYYKGIMVCDDESCKHTTRSPNFRLLGERERGTVCPNYPNCNGTLLRKYTEADLYKQLSYFCHILDTQHSLEKMDVGMRIQVEKAMTKIRPAVESAAAITRSIR----- A0A1D6N6A8/1311-1508 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- A0A0D9V896/1292-1490 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLIT--GSSTGNVSDLNEGKDANINFWRWMRCPRCPDDTDESTVSPAVLANQMKRQADNFINLYYKGLLMCDDEGCKYSTHNVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFVTLSQTINSALMEIQKIRDRC-A A0A0E0JRI1/1166-1363 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDATINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDAARCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- A0A0E0CAU3/1337-1534 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGKVSNPNEGNDTTINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- J3L674/1180-1377 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLIT--GSSIGNASDTNEEKDTNINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADNFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDTERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLDKLDQKSRLPFEKEFAALSQTINLALMEIQKIRDRC-- A0A0D9YHY1/1328-1525 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- A0A0E0N5K1/1307-1506 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRYLQ A0A0D3EWR4/1164-1363 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRYLQ A0A0E0FW87/1328-1525 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- B8A6Y4/1321-1518 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRC-- A0A0D9V897/1252-1450 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLIT--GSSTGNVSDLNEGKDANINFWRWMRCPRCPDDTDESTVSPAVLANQMKRQADNFINLYYKGLLMCDDEGCKYSTHNVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFVTLSQTINSALMEIQKIRDRC-A A0A0E0N5K2/1193-1392 IDDEDERYRGCEPLRLSCPSCSTTFDCPPVSSLII--GSSSGNVSNPNEGNDASINFWRRMRCPRCPDDTDESRVSPAVLANQMKRQADSFINLYYKGLLMCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGHLVRQYTEADLYRQLSYFCYVVDATRCLEKLDQKARLPFEKEFAALSQTINLALMEVQKIRDRYLQ A0A1D6N6A4/1212-1409 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- A0A1D6N6B1/150-347 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- A0A1D6N6A9/720-917 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- A0A1D6N6B0/264-461 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- A0A1D6N6A6/1282-1479 IDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLIT--SASATSVSDPIEGKDATANFWRHMRCPRCLDNTVESKFSPSMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSVNLRVMGDSERGTVCPNYPRCNGRLVRQYKESDLYRQLSYFCYVLDATRCLEKLDQKARLPFEREFVAVGQTIKLALLEIQKIRDRC-- K7L321/27-196 ----LSLYRGCEPLVLSYPSYSGTFDYPPIFKSICLLGSERQRPTN--------------LCYPKCPDV----KISPVMIANQ------RFVLMYYRGLLVCDDETCKHTMRSINHRLVCDSKRGTVCPNYPRYNGRLVRKYIKADLYKLFSYFFHVFDTVFCIEKMKAKSRIPIEKELIKTRAVIKSAASTAQETKI---- #=GC scorecons 3455577887998949789988579788664657400574444554415335533567446589795643244559856699957775649746997965698995987676858696678689997999997899597969587999778899768596457689664659665977554545575595445756755300 #=GC scorecons_70 _____*********_*******_*******_*_*____*_________________**__*_****_*_______**__****_***_*_**_******_*****_***_*_*_****_*****************_*****_**************_**__******___***_***_______*__*____*__*_____ #=GC scorecons_80 _____*********_*_*****__****_____*_______________________*____**_*_________**___***_***___**__****___****_***_*_*_*_*__**_**************_***_*_*_***_******_*_*___*_**_____*___***_______*__*_____________ #=GC scorecons_90 _______*__****_*_*****__*_**__________________________________**_*_________**___***_______*___**_*___****_**____*_*_*______***_*****_***_*_*_*___***__****____*_____**_____*___*____________*_____________ //