# STOCKHOLM 1.0 #=GF ID 1.10.260.40/FF/000044 #=GF DE Homeobox domain-containing protein #=GF AC 1.10.260.40/FF/000044 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 29.120 #=GS Q9TYT0/104-194 AC Q9TYT0 #=GS Q9TYT0/104-194 OS Caenorhabditis elegans #=GS Q9TYT0/104-194 DE HMBOX (Mammalian HoMeoBOX gene) homolog #=GS Q9TYT0/104-194 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q9TYT0/104-194 DR GO; GO:0005515; GO:0005634; #=GS A0A0K0JE62/168-257 AC A0A0K0JE62 #=GS A0A0K0JE62/168-257 OS Brugia malayi #=GS A0A0K0JE62/168-257 DE BMA-HMBX-1 #=GS A0A0K0JE62/168-257 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia; Brugia malayi; #=GS H3FM06/215-304 AC H3FM06 #=GS H3FM06/215-304 OS Pristionchus pacificus #=GS H3FM06/215-304 DE Uncharacterized protein #=GS H3FM06/215-304 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A0N5CR40/88-177 AC A0A0N5CR40 #=GS A0A0N5CR40/88-177 OS Thelazia callipaeda #=GS A0A0N5CR40/88-177 DE Uncharacterized protein #=GS A0A0N5CR40/88-177 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Thelazioidea; Thelaziidae; Thelazia; Thelazia callipaeda; #=GS A0A183E6L7/77-168 AC A0A183E6L7 #=GS A0A183E6L7/77-168 OS Gongylonema pulchrum #=GS A0A183E6L7/77-168 DE Uncharacterized protein #=GS A0A183E6L7/77-168 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Spiruroidea; Gongylonematidae; Gongylonema; Gongylonema pulchrum; #=GS A0A0R3RXA1/86-175 AC A0A0R3RXA1 #=GS A0A0R3RXA1/86-175 OS Elaeophora elaphi #=GS A0A0R3RXA1/86-175 DE Uncharacterized protein #=GS A0A0R3RXA1/86-175 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Elaeophora; Elaeophora elaphi; #=GS A0A182E5N8/168-257 AC A0A182E5N8 #=GS A0A182E5N8/168-257 OS Onchocerca ochengi #=GS A0A182E5N8/168-257 DE Uncharacterized protein #=GS A0A182E5N8/168-257 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Onchocerca; Onchocerca ochengi; #=GS A0A1S0TTJ3/88-177 AC A0A1S0TTJ3 #=GS A0A1S0TTJ3/88-177 OS Loa loa #=GS A0A1S0TTJ3/88-177 DE Homeobox domain-containing protein #=GS A0A1S0TTJ3/88-177 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Loa; Loa loa; #=GS A0A3P6SL65/168-257 AC A0A3P6SL65 #=GS A0A3P6SL65/168-257 OS Litomosoides sigmodontis #=GS A0A3P6SL65/168-257 DE Uncharacterized protein #=GS A0A3P6SL65/168-257 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Litomosoides; Litomosoides sigmodontis; #=GS A0A0R3QES0/1-89 AC A0A0R3QES0 #=GS A0A0R3QES0/1-89 OS Brugia timori #=GS A0A0R3QES0/1-89 DE Uncharacterized protein #=GS A0A0R3QES0/1-89 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia; Brugia timori; #=GS A0A0N4SZV8/151-240 AC A0A0N4SZV8 #=GS A0A0N4SZV8/151-240 OS Brugia pahangi #=GS A0A0N4SZV8/151-240 DE Uncharacterized protein #=GS A0A0N4SZV8/151-240 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia; Brugia pahangi; #=GS A0A044TK52/168-257 AC A0A044TK52 #=GS A0A044TK52/168-257 OS Onchocerca volvulus #=GS A0A044TK52/168-257 DE Uncharacterized protein #=GS A0A044TK52/168-257 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Onchocerca; Onchocerca volvulus; #=GS A0A1I7UM34/133-223 AC A0A1I7UM34 #=GS A0A1I7UM34/133-223 OS Caenorhabditis tropicalis #=GS A0A1I7UM34/133-223 DE Uncharacterized protein #=GS A0A1I7UM34/133-223 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; #=GS G0NMG5/134-225 AC G0NMG5 #=GS G0NMG5/134-225 OS Caenorhabditis brenneri #=GS G0NMG5/134-225 DE Uncharacterized protein #=GS G0NMG5/134-225 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A260ZX37/150-238 AC A0A260ZX37 #=GS A0A260ZX37/150-238 OS Caenorhabditis latens #=GS A0A260ZX37/150-238 DE Uncharacterized protein #=GS A0A260ZX37/150-238 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; #=GS E3LY08/150-238 AC E3LY08 #=GS E3LY08/150-238 OS Caenorhabditis remanei #=GS E3LY08/150-238 DE CRE-HMBX-1 protein #=GS E3LY08/150-238 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A8Y1J4/103-193 AC A8Y1J4 #=GS A8Y1J4/103-193 OS Caenorhabditis briggsae #=GS A8Y1J4/103-193 DE Protein CBR-HMBX-1 #=GS A8Y1J4/103-193 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A2H2I6H8/81-171 AC A0A2H2I6H8 #=GS A0A2H2I6H8/81-171 OS Caenorhabditis japonica #=GS A0A2H2I6H8/81-171 DE Uncharacterized protein #=GS A0A2H2I6H8/81-171 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A0A2G5VTN1/103-193 AC A0A2G5VTN1 #=GS A0A2G5VTN1/103-193 OS Caenorhabditis nigoni #=GS A0A2G5VTN1/103-193 DE Uncharacterized protein #=GS A0A2G5VTN1/103-193 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; #=GS G0PAJ1/136-227 AC G0PAJ1 #=GS G0PAJ1/136-227 OS Caenorhabditis brenneri #=GS G0PAJ1/136-227 DE Uncharacterized protein #=GS G0PAJ1/136-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A1I7VYN5/168-257 AC A0A1I7VYN5 #=GS A0A1I7VYN5/168-257 OS Loa loa #=GS A0A1I7VYN5/168-257 DE Uncharacterized protein #=GS A0A1I7VYN5/168-257 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Loa; Loa loa; #=GF SQ 21 Q9TYT0/104-194 QRTPMKEITTLDDPNELEEFMKQGEEACILDMKTFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPNKLA-- A0A0K0JE62/168-257 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- H3FM06/215-304 --TPMREITTLDNPAELEDFMSQGEEGCIADMKSFITHYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPEKLSS- A0A0N5CR40/88-177 --TPMREITTLDDPNELEEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A183E6L7/77-168 -RTPMREITTLDDPSELEDFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSSF A0A0R3RXA1/86-175 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A182E5N8/168-257 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A1S0TTJ3/88-177 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A3P6SL65/168-257 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A0R3QES0/1-89 ----MREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSSF A0A0N4SZV8/151-240 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A044TK52/168-257 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- A0A1I7UM34/133-223 -RTPMKEITTLDDPSELEEFMQQGEEACILDMKSFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPIKLNA- G0NMG5/134-225 -RTPMKEITTLDDPTELEEFMQQGEEACILDMKGFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPIKLSAF A0A260ZX37/150-238 -RTPMKEITTLDDPNELEEFMQQGEEACILDMKTFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPNKL--- E3LY08/150-238 -RTPMKEITTLDDPNELEEFMQQGEEACILDMKTFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPNKL--- A8Y1J4/103-193 -RTPMKEITTLDDPSELEEFMQNGEEMCIQDMKTFITQYSLRQTTVAHMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPEKLTA- A0A2H2I6H8/81-171 QRTPMKEITTLDDPNELDEFMQQGEEACILDMKAFITQYSMRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPTKLA-- A0A2G5VTN1/103-193 -RTPMKEITTLDDPSELEEFMQNGEEMCIQDMKTFITQYSLRQTTVAHMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPEKLTA- G0PAJ1/136-227 -RTPMKEITTLDDPTELEEFMQQGEEACILDMKGFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYCWYLNCRRHPIKLSAF A0A1I7VYN5/168-257 --TPMREITTLDDPSELDEFMQQGEEACILDMKKFITQFSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIYSWYLNCRRHPEKLSS- #=GC scorecons 027797999999895997899779996996999499987989999997999999999999999999999999999996999999999599430 #=GC scorecons_70 __************_******************_*******************************************_*********_**___ #=GC scorecons_80 __***_********_**_********_**_***_*******************************************_*********_**___ #=GC scorecons_90 ____*_********_**_***__***_**_***_****_********_*****************************_*********_**___ //