# STOCKHOLM 1.0
#=GF ID 1.10.260.40/FF/000043
#=GF DE DNA-binding protein
#=GF AC 1.10.260.40/FF/000043
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.493
#=GS Q8RHS0/1-69      AC Q8RHS0
#=GS Q8RHS0/1-69      OS Fusobacterium nucleatum subsp. nucleatum ATCC 25586
#=GS Q8RHS0/1-69      DE Transcriptional regulator, MerR family
#=GS Q8RHS0/1-69      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS A5I6R4/2-71      AC A5I6R4
#=GS A5I6R4/2-71      OS Clostridium botulinum A str. Hall
#=GS A5I6R4/2-71      DE Putative transcriptional regulator
#=GS A5I6R4/2-71      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A5HYN6/1-69      AC A5HYN6
#=GS A5HYN6/1-69      OS Clostridium botulinum A str. Hall
#=GS A5HYN6/1-69      DE Transcriptional regulator
#=GS A5HYN6/1-69      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A2G7H6Y6/2-71  AC A0A2G7H6Y6
#=GS A0A2G7H6Y6/2-71  OS Clostridium combesii
#=GS A0A2G7H6Y6/2-71  DE DNA-binding protein
#=GS A0A2G7H6Y6/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium combesii; 
#=GS A0A1V9I253/1-66  AC A0A1V9I253
#=GS A0A1V9I253/1-66  OS Clostridium sporogenes
#=GS A0A1V9I253/1-66  DE DNA-binding protein
#=GS A0A1V9I253/1-66  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sporogenes; 
#=GS F9EMP5/1-69      AC F9EMP5
#=GS F9EMP5/1-69      OS Fusobacterium nucleatum subsp. animalis ATCC 51191
#=GS F9EMP5/1-69      DE MerR family transcriptional regulator
#=GS F9EMP5/1-69      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. animalis; 
#=GS D5RF00/1-69      AC D5RF00
#=GS D5RF00/1-69      OS Fusobacterium nucleatum subsp. nucleatum ATCC 23726
#=GS D5RF00/1-69      DE Cupin domain protein
#=GS D5RF00/1-69      DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS A0A0M4SCT5/1-69  AC A0A0M4SCT5
#=GS A0A0M4SCT5/1-69  OS Fusobacterium nucleatum subsp. nucleatum
#=GS A0A0M4SCT5/1-69  DE MerR family transcriptional regulator
#=GS A0A0M4SCT5/1-69  DR ORG; Bacteria; Fusobacteria; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium; Fusobacterium nucleatum; Fusobacterium nucleatum subsp. nucleatum; 
#=GS A0A0E1QJ72/2-71  AC A0A0E1QJ72
#=GS A0A0E1QJ72/2-71  OS Clostridium botulinum
#=GS A0A0E1QJ72/2-71  DE DNA-binding protein
#=GS A0A0E1QJ72/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A175LSA0/2-71  AC A0A175LSA0
#=GS A0A175LSA0/2-71  OS Clostridium botulinum B2 433
#=GS A0A175LSA0/2-71  DE DNA-binding protein
#=GS A0A175LSA0/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS C1FL60/2-71      AC C1FL60
#=GS C1FL60/2-71      OS Clostridium botulinum A2 str. Kyoto
#=GS C1FL60/2-71      DE DNA-binding protein
#=GS C1FL60/2-71      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0E1L1F4/2-71  AC A0A0E1L1F4
#=GS A0A0E1L1F4/2-71  OS Clostridium botulinum CDC_1436
#=GS A0A0E1L1F4/2-71  DE Helix-turn-helix family protein
#=GS A0A0E1L1F4/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS M1ZXY6/2-71      AC M1ZXY6
#=GS M1ZXY6/2-71      OS Clostridium botulinum CFSAN001627
#=GS M1ZXY6/2-71      DE MerR family transcriptional regulator
#=GS M1ZXY6/2-71      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A3F3DQ21/2-71  AC A0A3F3DQ21
#=GS A0A3F3DQ21/2-71  OS Clostridium botulinum Bf
#=GS A0A3F3DQ21/2-71  DE DNA-binding protein
#=GS A0A3F3DQ21/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A1L3ND90/2-71  AC A0A1L3ND90
#=GS A0A1L3ND90/2-71  OS Clostridium botulinum
#=GS A0A1L3ND90/2-71  DE Helix-turn-helix family protein
#=GS A0A1L3ND90/2-71  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS B1L0Y5/2-71      AC B1L0Y5
#=GS B1L0Y5/2-71      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1L0Y5/2-71      DE DNA-binding protein
#=GS B1L0Y5/2-71      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A2G7HHK6/1-66  AC A0A2G7HHK6
#=GS A0A2G7HHK6/1-66  OS Clostridium combesii
#=GS A0A2G7HHK6/1-66  DE DNA-binding protein
#=GS A0A2G7HHK6/1-66  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium combesii; 
#=GS B1KUE4/1-66      AC B1KUE4
#=GS B1KUE4/1-66      OS Clostridium botulinum A3 str. Loch Maree
#=GS B1KUE4/1-66      DE DNA-binding protein
#=GS B1KUE4/1-66      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS C1FRM4/1-66      AC C1FRM4
#=GS C1FRM4/1-66      OS Clostridium botulinum A2 str. Kyoto
#=GS C1FRM4/1-66      DE DNA-binding protein
#=GS C1FRM4/1-66      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0L9Z4L0/1-66  AC A0A0L9Z4L0
#=GS A0A0L9Z4L0/1-66  OS Clostridium botulinum
#=GS A0A0L9Z4L0/1-66  DE DNA-binding protein
#=GS A0A0L9Z4L0/1-66  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0A2HLG8/1-69  AC A0A0A2HLG8
#=GS A0A0A2HLG8/1-69  OS Clostridium botulinum
#=GS A0A0A2HLG8/1-69  DE DNA-binding protein
#=GS A0A0A2HLG8/1-69  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A0E1KX64/1-69  AC A0A0E1KX64
#=GS A0A0E1KX64/1-69  OS Clostridium botulinum CDC_1436
#=GS A0A0E1KX64/1-69  DE Helix-turn-helix family protein
#=GS A0A0E1KX64/1-69  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A3F3DN55/1-69  AC A0A3F3DN55
#=GS A0A3F3DN55/1-69  OS Clostridium botulinum Bf
#=GS A0A3F3DN55/1-69  DE DNA-binding protein
#=GS A0A3F3DN55/1-69  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A3F3A9C3/1-69  AC A0A3F3A9C3
#=GS A0A3F3A9C3/1-69  OS Clostridium botulinum Ba4 str. 657
#=GS A0A3F3A9C3/1-69  DE DNA-binding protein
#=GS A0A3F3A9C3/1-69  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A7GA99/1-69      AC A7GA99
#=GS A7GA99/1-69      OS Clostridium botulinum F str. Langeland
#=GS A7GA99/1-69      DE DNA-binding protein
#=GS A7GA99/1-69      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GS A0A433Z227/1-69  AC A0A433Z227
#=GS A0A433Z227/1-69  OS Clostridium botulinum
#=GS A0A433Z227/1-69  DE DNA-binding protein
#=GS A0A433Z227/1-69  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; 
#=GF SQ 26
Q8RHS0/1-69              MT--IGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYLIEDEEDDI
A5I6R4/2-71              -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A5HYN6/1-69              MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A0A2G7H6Y6/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A1V9I253/1-66          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKS-----
F9EMP5/1-69              MT--IGKKLRKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYLLEDEDDDI
D5RF00/1-69              MT--IGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYLIEDEEDDI
A0A0M4SCT5/1-69          MT--IGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYLIEDEEDDI
A0A0E1QJ72/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A175LSA0/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
C1FL60/2-71              -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A0E1L1F4/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
M1ZXY6/2-71              -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A3F3DQ21/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A1L3ND90/2-71          -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
B1L0Y5/2-71              -IDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFFQAPKKNK
A0A2G7HHK6/1-66          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKS-----
B1KUE4/1-66              MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKS-----
C1FRM4/1-66              MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKS-----
A0A0L9Z4L0/1-66          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKS-----
A0A0A2HLG8/1-69          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A0A0E1KX64/1-69          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A0A3F3DN55/1-69          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A0A3F3A9C3/1-69          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A7GA99/1-69              MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
A0A433Z227/1-69          MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFFKSPE--L
#=GC scorecons           36349669776694594769779669659966999959554565695695999549694579765433222
#=GC scorecons_70        _*__*__***__*__*_**********_********_*____*_**_**_***__***__****_______
#=GC scorecons_80        ____*__*____*__*_*_**_*__*__**__****_*_______*__*_***__*_*___*_________
#=GC scorecons_90        ____*__*____*__*___*__*__*__**__****_*_______*__*_***__*_*___*_________
//