# STOCKHOLM 1.0
#=GF ID 1.10.220.30/FF/000026
#=GF DE Type III secretion system protein
#=GF AC 1.10.220.30/FF/000026
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 15.029
#=GS O84724/271-332      AC O84724
#=GS O84724/271-332      OS Chlamydia trachomatis D/UW-3/CX
#=GS O84724/271-332      DE Flagellar M-Ring Protein
#=GS O84724/271-332      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS Q9PLK7/269-330      AC Q9PLK7
#=GS Q9PLK7/269-330      OS Chlamydia muridarum str. Nigg
#=GS Q9PLK7/269-330      DE Uncharacterized protein
#=GS Q9PLK7/269-330      DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia muridarum; 
#=GS A0A1T4J1P3/269-330  AC A0A1T4J1P3
#=GS A0A1T4J1P3/269-330  OS Chlamydia suis
#=GS A0A1T4J1P3/269-330  DE Type III secretion system protein,type III secretion system protein,flagellar motor switch protein FliG,Secretory protein of YscJ/FliF family
#=GS A0A1T4J1P3/269-330  DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia suis; 
#=GS A0A0E9CTQ8/18-80    AC A0A0E9CTQ8
#=GS A0A0E9CTQ8/18-80    OS Chlamydia trachomatis
#=GS A0A0E9CTQ8/18-80    DE Type III secretion system protein
#=GS A0A0E9CTQ8/18-80    DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia trachomatis; 
#=GS A0A069ZR74/269-330  AC A0A069ZR74
#=GS A0A069ZR74/269-330  OS Chlamydia muridarum
#=GS A0A069ZR74/269-330  DE Type III secretion system protein
#=GS A0A069ZR74/269-330  DR ORG; Bacteria; Chlamydiae; Chlamydiia; Chlamydiales; Chlamydiaceae; Chlamydia; Chlamydia muridarum; 
#=GF SQ 5
O84724/271-332              -TYDHVSQQKEKIQSINIPKLIEMMKRESPEKVALILSYLDSAKAEELLNKLPEEMKSAVLKL
Q9PLK7/269-330              -TYDHVSQQKEKIQSINIPKLIEMMNRESPEKVALILSYLDSTKAEELLNKLPEEMRSAVLKL
A0A1T4J1P3/269-330          -TYDHVSQQKEKIQSINIPKLIEMMKRESPEKVALILSYLDAAKAEELLDKLPEDMRNAVLKL
A0A0E9CTQ8/18-80            HTYDHVSQQKEKIQSINIPKLIEMMKRESPEKVALILSYLDSAKAEELLNKLPEEMKSAVLKL
A0A069ZR74/269-330          -TYDHVSQQKEKIQSINIPKLIEMMNRESPEKVALILSYLDSTKAEELLNKLPEEMRSAVLKL
#=GC scorecons              099999999999999999999999959999999999999996699999969999796699999
#=GC scorecons_70           _************************_***************__**************_*****
#=GC scorecons_80           _************************_***************__******_****_*__*****
#=GC scorecons_90           _************************_***************__******_****_*__*****
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