# STOCKHOLM 1.0 #=GF ID 1.10.2000.10/FF/000017 #=GF DE Alpha 1 type XVIII collagen #=GF AC 1.10.2000.10/FF/000017 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 90.710 #=GS P39060/331-447 AC P39060 #=GS P39060/331-447 OS Homo sapiens #=GS P39060/331-447 DE Collagen alpha-1(XVIII) chain #=GS P39060/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P39060/331-447 DR GO; GO:0005576; GO:0005581; GO:0005615; GO:0005788; GO:0007601; GO:0008285; GO:0009887; GO:0030020; GO:0030198; GO:0062023; GO:0070062; #=GS P39061/364-483 AC P39061 #=GS P39061/364-483 OS Mus musculus #=GS P39061/364-483 DE Collagen alpha-1(XVIII) chain #=GS P39061/364-483 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS P39061/364-483 DR GO; GO:0001525; GO:0001886; GO:0005604; GO:0005615; GO:0008284; GO:0030020; GO:0030198; GO:0030335; GO:0062023; GO:2000353; #=GS Q2PBM7/203-308 AC Q2PBM7 #=GS Q2PBM7/203-308 OS Danio rerio #=GS Q2PBM7/203-308 DE Long form of collagen XVIII alpha 1 chain #=GS Q2PBM7/203-308 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS Q2PBM7/203-308 DR GO; GO:0001755; #=GS E9QPX1/364-483 AC E9QPX1 #=GS E9QPX1/364-483 OS Mus musculus #=GS E9QPX1/364-483 DE Collagen alpha-1(XVIII) chain #=GS E9QPX1/364-483 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A7RPM4/2-126 AC A7RPM4 #=GS A7RPM4/2-126 OS Nematostella vectensis #=GS A7RPM4/2-126 DE Predicted protein #=GS A7RPM4/2-126 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS Q8JFF5/493-612 AC Q8JFF5 #=GS Q8JFF5/493-612 OS Xenopus laevis #=GS Q8JFF5/493-612 DE Type XVIII collagen long variant #=GS Q8JFF5/493-612 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; #=GS G1KY36/244-368 AC G1KY36 #=GS G1KY36/244-368 OS Anolis carolinensis #=GS G1KY36/244-368 DE Uncharacterized protein #=GS G1KY36/244-368 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; #=GS F6XNR9/343-460 AC F6XNR9 #=GS F6XNR9/343-460 OS Equus caballus #=GS F6XNR9/343-460 DE Collagen type XVIII alpha 1 chain #=GS F6XNR9/343-460 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; #=GS F6QX46/299-418 AC F6QX46 #=GS F6QX46/299-418 OS Ornithorhynchus anatinus #=GS F6QX46/299-418 DE Uncharacterized protein #=GS F6QX46/299-418 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS W5MSP5/58-179 AC W5MSP5 #=GS W5MSP5/58-179 OS Lepisosteus oculatus #=GS W5MSP5/58-179 DE Uncharacterized protein #=GS W5MSP5/58-179 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS H2MHG7/238-358 AC H2MHG7 #=GS H2MHG7/238-358 OS Oryzias latipes #=GS H2MHG7/238-358 DE Collagen type XVIII alpha 1 chain a #=GS H2MHG7/238-358 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS A0A2K5EXN4/318-436 AC A0A2K5EXN4 #=GS A0A2K5EXN4/318-436 OS Aotus nancymaae #=GS A0A2K5EXN4/318-436 DE Uncharacterized protein #=GS A0A2K5EXN4/318-436 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; #=GS A0A2K5J692/327-446 AC A0A2K5J692 #=GS A0A2K5J692/327-446 OS Colobus angolensis palliatus #=GS A0A2K5J692/327-446 DE Uncharacterized protein #=GS A0A2K5J692/327-446 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Colobus; Colobus angolensis; Colobus angolensis palliatus; #=GS F6WDH0/225-344 AC F6WDH0 #=GS F6WDH0/225-344 OS Xenopus tropicalis #=GS F6WDH0/225-344 DE Collagen type XVIII alpha 1 #=GS F6WDH0/225-344 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; #=GS Q60569/364-483 AC Q60569 #=GS Q60569/364-483 OS Mus cookii #=GS Q60569/364-483 DE Alpha 1 type XVIII collagen #=GS Q60569/364-483 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus cookii; #=GS A0A2K6BX76/331-447 AC A0A2K6BX76 #=GS A0A2K6BX76/331-447 OS Macaca nemestrina #=GS A0A2K6BX76/331-447 DE Uncharacterized protein #=GS A0A2K6BX76/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca nemestrina; #=GS H2P3G5/326-442 AC H2P3G5 #=GS H2P3G5/326-442 OS Pongo abelii #=GS H2P3G5/326-442 DE Collagen type XVIII alpha 1 chain #=GS H2P3G5/326-442 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; #=GS A0A2I3MLD2/331-447 AC A0A2I3MLD2 #=GS A0A2I3MLD2/331-447 OS Papio anubis #=GS A0A2I3MLD2/331-447 DE Uncharacterized protein #=GS A0A2I3MLD2/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; #=GS A0A2K5MXS9/331-447 AC A0A2K5MXS9 #=GS A0A2K5MXS9/331-447 OS Cercocebus atys #=GS A0A2K5MXS9/331-447 DE Collagen type XVIII alpha 1 chain #=GS A0A2K5MXS9/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Cercocebus; Cercocebus atys; #=GS A0A2K6A7P3/331-447 AC A0A2K6A7P3 #=GS A0A2K6A7P3/331-447 OS Mandrillus leucophaeus #=GS A0A2K6A7P3/331-447 DE Uncharacterized protein #=GS A0A2K6A7P3/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Mandrillus; Mandrillus leucophaeus; #=GS A0A2K6KLT4/332-448 AC A0A2K6KLT4 #=GS A0A2K6KLT4/332-448 OS Rhinopithecus bieti #=GS A0A2K6KLT4/332-448 DE Uncharacterized protein #=GS A0A2K6KLT4/332-448 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; #=GS G3R7U1/334-450 AC G3R7U1 #=GS G3R7U1/334-450 OS Gorilla gorilla gorilla #=GS G3R7U1/334-450 DE Collagen type XVIII alpha 1 chain #=GS G3R7U1/334-450 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; #=GS H2RAH2/331-447 AC H2RAH2 #=GS H2RAH2/331-447 OS Pan troglodytes #=GS H2RAH2/331-447 DE COL18A1 isoform 3 #=GS H2RAH2/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; #=GS F7GIR5/331-447 AC F7GIR5 #=GS F7GIR5/331-447 OS Macaca mulatta #=GS F7GIR5/331-447 DE Uncharacterized protein #=GS F7GIR5/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; #=GS A0A2K5WJ69/331-447 AC A0A2K5WJ69 #=GS A0A2K5WJ69/331-447 OS Macaca fascicularis #=GS A0A2K5WJ69/331-447 DE Uncharacterized protein #=GS A0A2K5WJ69/331-447 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; #=GS B0S8G4/203-308 AC B0S8G4 #=GS B0S8G4/203-308 OS Danio rerio #=GS B0S8G4/203-308 DE Collagen type XVIII alpha 1 chain a #=GS B0S8G4/203-308 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS B0S8G4/203-308 DR GO; GO:0001755; #=GS A0A3P9KAP2/175-299 AC A0A3P9KAP2 #=GS A0A3P9KAP2/175-299 OS Oryzias latipes #=GS A0A3P9KAP2/175-299 DE Uncharacterized protein #=GS A0A3P9KAP2/175-299 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GF SQ 27 P39060/331-447 ----------AGRCLPLPPSLPVCGHLGISRFWLPNHLHHESGEQVRAGARAWGGLLQTHCHPFLAWFFCLLLVPPCGSVPPPAPP-PCCQFCEALQDACWSRL-----GGGRLPVACASLPTQEDGY-CVLIG----- P39061/364-483 -------LTSTSRCLPLPPTLTLCSRLGIGHFWLPNHLHHTDSVEVEATVQAWGRFLHTNCHPFLAWFFCLLLAPSCGPGPPPPLP-PCRQFCEALEDECWNYL-----AGDRLPVVCASLPSQEDGY-CVFIG----- Q2PBM7/203-308 ---------EPLRCLPVDSGLPFCTRRGVESFSVPNFLNQSSVEEVRMVLTEWAWLLRSGCHHSLEWFFCLLLTPRCGHSG--SLL-PCRSSCEVLQDSCWTLL-----DEGRLPVECKSLPE---------------- E9QPX1/364-483 -------LTSTSRCLPLPPTLTLCSRLGIGHFWLPNHLHHTDSVEVEATVQAWGRFLHTNCHPFLAWFFCLLLAPSCGPGPPPPLP-PCRQFCEALEDECWNYL-----AGDRLPVVCASLPSQEDGY-CVFIG----- A7RPM4/2-126 ----------PNTCQPI--TVPACQSLPYNMTRLPNHLGHTSQRQIEHEINEYSQLISANCSADLVFLLCVYHLPICAVEFEKPVL-PCRSLCRQVKRDCAPIIGQFSDQRSRRNVNCNDMPAYETGV-CVQPESFLPH Q8JFF5/493-612 ----------NARCFPTPTSLSFCKRLGIDSFLLPNFLNHSTVLEIQAALHDWEGLFKSQCHQYLEWFFCLLLAPSCNTGTLAPPPVPCRQFCEVLQDACWNLL-----EGSHLPVSCDSLPENNSGVSCVYIHF---- G1KY36/244-368 SHSNARLTPTAGHCLPLPTKLSYCNNLGMKHFRVPNYLHLGSEEEIQAALHEWEGLLKSRCHRYLEWFFCLLLVPGCNASLPITPP-PCRGFCEALKDLCWIHL-----KEGQLPISCNSLPEEDGVYSCV-------- F6XNR9/343-460 -----------GRCLPLPPSLPVCGRLGIGRSWLPNHLHHVRSEEVQAAARAWGGLLRTHCHRFLAWFFCLLLAPPCG--PPPAPP-PCRQFCEVLEDACWSHL-----DGGGLPVSCASLPAQEDGY-CVFIGPAAD- F6QX46/299-418 -----------GHCWPVPADWSICRRLGIERFWLPNYLNHSSDLQIREALHEWEGLLRSQCHRLLEWFFCLVLVPQCNASLPIMPP-PCREFCEALRDFCWIHL-----KEGQLPISCESLPAEEDEYSCVFINVSA-- W5MSP5/58-179 -------FLESSRCLPMAADLPFCTNMGIESFALPNYLNHTSVLEVQATLLEWAWLLKSRCHHSLERFFCLLLVPKCGTVGLAPAL-PCRSFCETLRDGCWMHL-----HEGRLPVSCDSLPEKDHAYQCLSVSN---- H2MHG7/238-358 --------ASSISCLVLDAALPFCSSKFGETFAVPNYFNHSSLEEVQALLKEWAWLLESRCHHSLEWFFCLLLVPKCDPATPMLTL-PCRSFCEVLLDSCWALL-----EGQHLPVECHTLPDASHGYQCLSVCN---- A0A2K5EXN4/318-436 --------APSGRCLPLPPSLPVCSRLGFSRSWLPNHLHHESGEQVQAAARAWGGLLRTHCHPFLAWFFCLLLAPPCGRVPPPAPP-PCRQFCEALRDACWSRL-----GGGRLPVACASLPTQEDGY-CVFIG----- A0A2K5J692/327-446 -------AAPASRCLPLPPSLPVCGRLGISRSWLPNHLHHESGEQVQAAARVWGALLRTHCHPFLAWFFCLLLAPPCGRVPLPGPP-PCRQFCEVLQDTCWSHL-----SGGRLPVACASLPTQEDGY-CVFIG----- F6WDH0/225-344 ----------NSRCLPTPTSLSFCKRLGIDSFLLPNYLNHSTVLEIQAALHDWEGLFKSQCHRYLESFFCLLLAPSCNAGTVAPPLVPCRQFCEVLQDACWNLL-----EGSHLPVSCDSLPGKNSGVSCLYIHF---- Q60569/364-483 -------LTSTSRCLPLPPTLTLCSRLGIGHFWLPNHLHHTDSVEVEATVQAWGRFLHTNCHPFLAWFFCLLLAPSCGPGPPPPLP-PCRQFCEALEDECWNYL-----AGDRLPVVCASLPSQEDGY-CVFIG----- A0A2K6BX76/331-447 ----------AGRCLPLPPSLPVCGRLGISRSWLPNHLHHESGEQVQAAAQVWGGLLRTHCHPFLAWFFCLLLAPPCSRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGWLPVACASLPAQEDGY-CVFIG----- H2P3G5/326-442 ----------AGRCLPLPPSLPVCGRLGISRSWLPNHLHHESGEQVRAGAQAWGGLLRTRCHPFLAWFFCLLLAPPCGSVPPPTPP-PCRQFCEALQDACWSRL-----SGGRLPVACASLLTQEDGY-CVFIG----- A0A2I3MLD2/331-447 ----------AGRCLPLPPSLPVCGRLGISRSWLPNHLHHESSQQVQAAAQVWGGLLRTHCHPFLTWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGRLPVACASLPTQEDGY-CVFIG----- A0A2K5MXS9/331-447 ----------AGRCLPLPPSLPVCGHLGISRSWLPNHLHHESSQQVQAAAQVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGRLPVACASLPTQEDGY-CVFIG----- A0A2K6A7P3/331-447 ----------AGRCLPLPPSLLVCGRLGILRSWLPNHLHHESSQQVQAAAQVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGRLPVACASLPTQEDGY-CVFIG----- A0A2K6KLT4/332-448 ----------TGRCLPLPPSLPVCGRLGISRSWLPNHLHHESVEQVQAAARVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSHL-----SRGRLPVACASLPAQEDGY-CVFIG----- G3R7U1/334-450 ----------AGRCLPLPPSLPVCGRLGISRFWLPNHLHHESGEQVRAGARAWGGLLRTHCHPFLAWFFCLLLAPPCGSVPPPAPP-PCRQFCEALQDACWSRL-----GGGRLPVACASLPTQEDGY-CVFIG----- H2RAH2/331-447 ----------AGRCLPLPPSLPVCGRLGISHFWLPNHLHHESGEQVRAGARAWGGLLRTHCHPFLAWFFCLLLAPPCGSVPPPAPP-PCRQFCEALQDACWSRL-----GGGRLPVACASLPTQEDGY-CVFIG----- F7GIR5/331-447 ----------AGRCLPLPPSLPVCGRLGISRSWLPNHLHHESGEQVQAAAQVWGGLLRTHCHPFLAWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGWLPVACASLPAQEDGY-CVFIG----- A0A2K5WJ69/331-447 ----------AGRCLPLPPSLPVCGRLGISRSWLPNHLHHESGEQVQAAAQVWGGLLRTHCHPFLTWFFCLLLAPPCGRVPLPAPP-PCRQFCEALQDTCWSRL-----SGGWLPVACASLPAQEDGY-CVFIG----- B0S8G4/203-308 ---------EPLRCLPVDSGLPFCTRRGVESFSVPNFLNQSSVEEVRMVLTEWAWLLRSGCHHSLEWFFCLLLTPRCGHSG--SLL-PCRSSCEVLQDSCWTLL-----DEGRLPVECKSLPE---------------- A0A3P9KAP2/175-299 GIHAQTENASSKSCLVLDAALPFCSSKFGETFAVPNYFNHSSLEEVQALLKEWAWLLESRCHHSLEWFFCLLLVPKCDPATPMSTL-PCRSFCEVLLDSCWALL-----EEQHLPVECHTLPDASHGYQCL-------- #=GC scorecons 0000000000346977654476494556544547996857463467564544854875549844946889877593953344345609985798585839743800000355578849478843445507534300000 #=GC scorecons_70 _____________***____*__*___*_____*****_*_*__**_*____*__**___**__*_*******_*_*__________***_***_*_*_**__*_________***_*_***_______*_________ #=GC scorecons_80 _____________*_*____*__*__________**_*_*_____*______*__**___**__*__******_*_*__________***__**_*_*_**__*_________***_*__**_______*_________ #=GC scorecons_90 _____________*_________*__________**________________*_______*___*__****___*_*__________***__**_*___*___*___________*_*__**_________________ //