# STOCKHOLM 1.0 #=GF ID 1.10.20.120/FF/000002 #=GF DE Ribonuclease H2 subunit B #=GF AC 1.10.20.120/FF/000002 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 97.839 #=GS Q19684/106-227 AC Q19684 #=GS Q19684/106-227 OS Caenorhabditis elegans #=GS Q19684/106-227 DE Uncharacterized protein #=GS Q19684/106-227 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS Q9VYA4/104-243 AC Q9VYA4 #=GS Q9VYA4/104-243 OS Drosophila melanogaster #=GS Q9VYA4/104-243 DE Uncharacterized protein, isoform A #=GS Q9VYA4/104-243 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS B3S7Q1/87-223 AC B3S7Q1 #=GS B3S7Q1/87-223 OS Trichoplax adhaerens #=GS B3S7Q1/87-223 DE Uncharacterized protein #=GS B3S7Q1/87-223 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS Q55D33/137-267 AC Q55D33 #=GS Q55D33/137-267 OS Dictyostelium discoideum #=GS Q55D33/137-267 DE Uncharacterized protein #=GS Q55D33/137-267 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS A0NF47/79-214 AC A0NF47 #=GS A0NF47/79-214 OS Anopheles gambiae #=GS A0NF47/79-214 DE AGAP008161-PA #=GS A0NF47/79-214 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS A0A1S4GY55/81-216 AC A0A1S4GY55 #=GS A0A1S4GY55/81-216 OS Anopheles gambiae #=GS A0A1S4GY55/81-216 DE Ribonuclease H2 subunit B #=GS A0A1S4GY55/81-216 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS E9GI46/71-205 AC E9GI46 #=GS E9GI46/71-205 OS Daphnia pulex #=GS E9GI46/71-205 DE Uncharacterized protein #=GS E9GI46/71-205 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; #=GS D6WMH9/100-237 AC D6WMH9 #=GS D6WMH9/100-237 OS Tribolium castaneum #=GS D6WMH9/100-237 DE Ribonuclease H2 subunit B-like Protein #=GS D6WMH9/100-237 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS W4X9G7/96-233 AC W4X9G7 #=GS W4X9G7/96-233 OS Strongylocentrotus purpuratus #=GS W4X9G7/96-233 DE Uncharacterized protein #=GS W4X9G7/96-233 DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; #=GS A7RQZ3/97-233 AC A7RQZ3 #=GS A7RQZ3/97-233 OS Nematostella vectensis #=GS A7RQZ3/97-233 DE Predicted protein #=GS A7RQZ3/97-233 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS F6WCS0/86-211 AC F6WCS0 #=GS F6WCS0/86-211 OS Ciona intestinalis #=GS F6WCS0/86-211 DE ribonuclease H2 subunit B #=GS F6WCS0/86-211 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS F1QN47/91-229 AC F1QN47 #=GS F1QN47/91-229 OS Danio rerio #=GS F1QN47/91-229 DE Ribonuclease H2, subunit B #=GS F1QN47/91-229 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS C3ZE65/42-181 AC C3ZE65 #=GS C3ZE65/42-181 OS Branchiostoma floridae #=GS C3ZE65/42-181 DE Uncharacterized protein #=GS C3ZE65/42-181 DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; #=GS F0ZTU6/137-267 AC F0ZTU6 #=GS F0ZTU6/137-267 OS Dictyostelium purpureum #=GS F0ZTU6/137-267 DE Uncharacterized protein #=GS F0ZTU6/137-267 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS A0A369SLI6/87-223 AC A0A369SLI6 #=GS A0A369SLI6/87-223 OS Trichoplax sp. H2 #=GS A0A369SLI6/87-223 DE Ribonuclease H2 subunit B #=GS A0A369SLI6/87-223 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; #=GS H3F585/628-752 AC H3F585 #=GS H3F585/628-752 OS Pristionchus pacificus #=GS H3F585/628-752 DE Uncharacterized protein #=GS H3F585/628-752 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS H2M8M5/90-226 AC H2M8M5 #=GS H2M8M5/90-226 OS Oryzias latipes #=GS H2M8M5/90-226 DE Uncharacterized protein #=GS H2M8M5/90-226 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS A8XP28/109-230 AC A8XP28 #=GS A8XP28/109-230 OS Caenorhabditis briggsae #=GS A8XP28/109-230 DE Protein CBG16435 #=GS A8XP28/109-230 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS A0A3B3DI26/90-226 AC A0A3B3DI26 #=GS A0A3B3DI26/90-226 OS Oryzias melastigma #=GS A0A3B3DI26/90-226 DE Uncharacterized protein #=GS A0A3B3DI26/90-226 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias melastigma; #=GS B4R4E0/126-265 AC B4R4E0 #=GS B4R4E0/126-265 OS Drosophila simulans #=GS B4R4E0/126-265 DE GD17137 #=GS B4R4E0/126-265 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS B3NWL2/104-243 AC B3NWL2 #=GS B3NWL2/104-243 OS Drosophila erecta #=GS B3NWL2/104-243 DE Uncharacterized protein #=GS B3NWL2/104-243 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4Q2E3/104-243 AC B4Q2E3 #=GS B4Q2E3/104-243 OS Drosophila yakuba #=GS B4Q2E3/104-243 DE Uncharacterized protein #=GS B4Q2E3/104-243 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS A0A2R8QEF7/91-229 AC A0A2R8QEF7 #=GS A0A2R8QEF7/91-229 OS Danio rerio #=GS A0A2R8QEF7/91-229 DE Ribonuclease H2, subunit B #=GS A0A2R8QEF7/91-229 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A2R8QE52/91-229 AC A0A2R8QE52 #=GS A0A2R8QE52/91-229 OS Danio rerio #=GS A0A2R8QE52/91-229 DE Ribonuclease H2, subunit B #=GS A0A2R8QE52/91-229 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A3P9KRN6/90-226 AC A0A3P9KRN6 #=GS A0A3P9KRN6/90-226 OS Oryzias latipes #=GS A0A3P9KRN6/90-226 DE Ribonuclease H2, subunit B #=GS A0A3P9KRN6/90-226 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS A0A3P9I3B6/90-226 AC A0A3P9I3B6 #=GS A0A3P9I3B6/90-226 OS Oryzias latipes #=GS A0A3P9I3B6/90-226 DE Ribonuclease H2, subunit B #=GS A0A3P9I3B6/90-226 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GF SQ 26 Q19684/106-227 -NLVFICLPYLQKT--A--GKFVEIGEILVDDQVDGI-KELAENER-ILKALEAVSDVKDVLDVKLYRLNDQKMLDWMRRKFDSLKKLLESDA---------------HKSLLSC----PEAFDRYVFTFLSEYLSSDLALIVKDHLN----- Q9VYA4/104-243 VDPTFLALHHLRKHCAQ---RAISLDNIAVEE--AST-SRLLNEIL-DPGNLKCVADVKSSGEQKFYKYNQERTLAWLALKTRQVAKILKEKQVHCGHSAQSQNFVRSEKLVAEN-VSNEMDYTRMACDYVGRYLDADLHGLLTSYLH----- B3S7Q1/87-223 VDPIFMILPYLAKV--K--DKFIPMDQILMDDKFPSC-SRLYDCVS--ANDLAKVCECKGSEDLFAYRLSTDKLIGWIQRKIERVADDLRHLGVYAGTGSQSETFTRSSKDSSTS----KDDYIKYTFGLISDYLSKDICALVEKKMN----- Q55D33/137-267 IDPLFLLIPFLEKYKSLHKNEYLEISSIINDSYYCNL-SKIPF----KHSQLSLICDSKEIAGSKLYRLEDEKLLIWLRCKVKNISNYLKETNTDIF---KTSNYVKK----DLS----WETLYTMSIGFVSEYLSESNCKMLNQSF------ A0NF47/79-214 IDPLFLVLPYLVEHCSE---RAVPLDQILIDDKFPCT-SQLVEVLP--ADRLSLIADEKRAGSILALKYNETKALEWLVSKCHRLSKVIGTEE---GPTARSLNYIKEEKENEKD--EDEKSTLHTALGIVSDYLSLEFGRKLSVAL------ A0A1S4GY55/81-216 IDPLFLVLPYLVEHCSE---RAVPLDQILIDDKFPCT-SQLVEVLP--ADRLSLIADEKRAGSILALKYNETKALEWLVSKCHRLSKVIGTEE---GPTARSLNYIKEEKENEKD--EDEKSTLHTALGIVSDYLSLEFGRKLSVAL------ E9GI46/71-205 IDPLFVIIPYLQKA-----KHTSPIDQLLVDEEYTDT-GKLSLCSK--KDDLEKIADCKQSGTFQAWKYNEGKTFDWLGKKVSRLTQHLKDKNFNVTQSAVSSNYVKTDSA-TVP----ESSFTRYAFGLISEYLSDELSAALEKHLD----- D6WMH9/100-237 IDPIFLVLPYLRKYCSS---QAIPLDQLLRDEEFPET-ERLLKSSG--LKYLNMIADRKGDEELNAFKYNEEKTLSWLKKKTERVAEILKQKNIHVGSGAVSATFVKSSKSESSD----SDSHLRYAHGIVSEYLMDDLSQKLLKYLN----- W4X9G7/96-233 VDPVFLALPYLIKSSKER-NKFMTLDQIILDDDYPQC-IRLLHCSG--MSGIERVAEVKGSGDVRAYRYDESKTLDWLKDKVEQTAARLGQTDVHVASGAQSTTFVRSSKEQGAT----E------GRALIKE-VSEKVSKALENGAEPPLKK A7RQZ3/97-233 IDSVFLCLPYLEKC--S--SQFRTLDQILIDSKFPSV-GKLTNCIT--HESLTSVCDCKGDDDLHVYRINEDKTMAWLKTKVECVADYLATSDINVSKGSQSATFVRSRKHSDVT----REDHLRYSSGMICDYLSLSWEEKLKKALN----- F6WCS0/86-211 MDPLFMCLPSLCANARE---KFVPLDQIFSTENGEEVLGKVFEHSALNVKQLDNVCDSKSCVDLLAYRYNETKTLEWLKVKVERTVDALKSADLFIG---------------DTE----GDAYTRYAYGLICENIHADLAKKLATHLK----- F1QN47/91-229 MDPLFLLLPYISSVGKE--GKFQSVKQMVMDEDYPGC-SRLLQCKQ-GLDSLHHVADEKEVNDQKYHKYNLEKTLEWLKKKVQRTVNALKKGNISVGGGVKSSTFVRVKHE-DAS----EEDYLRYAHGLISEYISEDLSKDLLKHLE----- C3ZE65/42-181 VDPLFLILPYLVKAYES--GMYMPIDQLVSDDQYPEC-TRLLSCID--PSDLEHICDVKGSGDVRACRYSEERTLEWLKQK---ATDKLTDSSVKVAGGAQLLTFTHSLKTEQASRGKKRNDYLRYACGLVSDYISTDLSKQLTQHMG----- F0ZTU6/137-267 IDPLFLLIPFLEKNKTQNKNEYFEVSSVVNDPIYSNL-SKITF----KDEQLKLICDFKDFAGSSLYKLDDEKLLLWLRCKVKNIANHLKDNDIDIF---KTSNHVKN----VLS----WETLYTMSIGFISEYLSDAHIKLLNESF------ A0A369SLI6/87-223 VDPIFMILPYLAKV--K--DKFIPMDQILMDDKFPSC-SRLYDCVS--ANDLAKVCECKGSEDLFAYRLSTDKLIGWIQRKIERVADDLRHLGVYAGTGSQSETFTRSSKDSSTS----KDDYIKYTFGLISDYLSKDICALVEKKMN----- H3F585/628-752 FNPIFLVLPYLEKK--K--ARYEQLEEILVDEELPAI-ERLRENEQ-MMKELEKVADKTDVCDEILYKLKEKKALEWISGRFEVLKTALVAHA-------------KLHDSITRD----DEVVSRYTFGVLSDHLSPSMAAVVKEHLQ----- H2M8M5/90-226 MDPLFLILPYLMKSGRE--GKFQPVDQVVKDEDFPAC-SRLLSCSC----SFLHIAEEKEVGGLKFHRYSQERTMNWLKKKVERTAAALKTKNVSVGEGVKSTTYIRIKSESEGR----EEDYLRYAHGLISEYISEALSKALLKHLG----- A8XP28/109-230 -NPIFICLPYLEKI--E--SKFVEIDEILKDEQYEDI-KELAGNQR-VLRTLEVICDVKDVLNVKLFRLNRQKMLEWISGKFESLKKQMESDA---------------HKSLLDC----AEAYDRHVFTFLADFLSPEFSQIVKNHLK----- A0A3B3DI26/90-226 MDPLFLILPYLMKSGRE--GKFQPVDQVVKDEEFPTC-SRLLSCTC----SLLHIAEEKEVGGQKFHRYSQEKTMNWLKRKVERTAAALKKKNISVGEGVKSTTYIRVKSESEER----EEDYLRYAHGLISEYISEELSKALLNHLG----- B4R4E0/126-265 VDPTFLALHHLRKHCAQ---RAMSLDNIAVEE--AST-SRLLNEIL-DPGNLKCVTDVKSSGEQKFYKYNQERTLAWLALKTRQVAKILKEKQVHCGHSAQSQNFVRSEKLVAEN-VSNEMDYTRMACDFVGRYLDADLHGLLTSYLH----- B3NWL2/104-243 VDPTLLALYHLRKHCAQ---KAMSLDNIAVEE--AST-SRLLNEIL-DPENLKCVADVKSSGEQKFYRYNQERTLAWLALKTRQVVRILKEKQVHCGHSAQSQNFVRSEKLAAEN-VSNEMDYTRMACDIVGRYLDADLHGLLINYLH----- B4Q2E3/104-243 VDSTLLALHHLRKHCAQ---RAMSLDNIAVEE--AST-SRLLNEIL-DPENLKCVVDVKSSGEQKFYKYNQERTLAWLALKTRQVAKILKEKQVHCGHSAQSQNFVRSEKLAAEN-VSNEMDYTRMACDIVGRYLDADLHDLLTSYLH----- A0A2R8QEF7/91-229 MDPLFLLLPYISSVGKE--GKFQSVKQMVMDEDYPGC-SRLLQCKQ-GLDSLHHVADEKEVNDQKYHKYNLEKTLEWLKKKVQRTVNALKKGNISVGGGVKSSTFVRVKHE-DAS----EEDYLRYAHGLISEYISEDLSKDLLKHLE----- A0A2R8QE52/91-229 MDPLFLLLPYISSVGKE--GKFQSVKQMVMDEDYPGC-SRLLQCKQ-GLDSLHHVADEKEVNDQKYHKYNLEKTLEWLKKKVQRTVNALKKGNISVGGGVKSSTFVRVKHE-DAS----EEDYLRYAHGLISEYISEDLSKDLLKHLE----- A0A3P9KRN6/90-226 MDPLFLILPYLMKSGRE--GKFQPVDQVVKDEDFPAC-SRLLSCSC----SFLHIAEEKEVGGLKFHRYSQEKTMNWLKKKVERTAAALKTKNVSVGEGVKSTTYIRIKSESEGR----EEDYLRYAHGLISEYISEELSKALLKHLG----- A0A3P9I3B6/90-226 MDPLFLILPYLMKSGRE--GKFQPVDQVVKDEDFPGC-SRLLSCSC----SFLHIAEEKEVGGLKFHRYSQEKTMNWLKKKVERTAAALKTKNVSVGEGVKSTTYIRIKSESEGR----EEDYLRYAHGLISEYISEELSKALLKHLG----- #=GC scorecons 477587477783631140025434565653762453405674332200233733757384445344575545756497438444444375334323413234244452242133300004444364536566676635544373446200000 #=GC scorecons_70 _**_**_****_*____________*_*__*________**__________*__*_*_*________*____*_*_**__*_______*_______________________________________*_*__***______*___*______ #=GC scorecons_80 _**_*__**_*___________________*_________*__________*____*_*_____________*___**__*_______*_____________________________________________________*__________ #=GC scorecons_90 ____*_____*_______________________________________________*_________________*___*________________________________________________________________________ //