# STOCKHOLM 1.0
#=GF ID 1.10.20.10/FF/000099
#=GF DE nuclear transcription factor Y subunit beta
#=GF AC 1.10.20.10/FF/000099
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 80.161
#=GS Q8ST61/33-156      AC Q8ST61
#=GS Q8ST61/33-156      OS Drosophila melanogaster
#=GS Q8ST61/33-156      DE Nuclear factor Y-box B, isoform A
#=GS Q8ST61/33-156      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8ST61/33-156      DR GO; GO:0000976; GO:0016602; GO:0043066; GO:0043410; GO:0045678; GO:0045893; GO:0048749; 
#=GS O17286/58-156      AC O17286
#=GS O17286/58-156      OS Caenorhabditis elegans
#=GS O17286/58-156      DE Nuclear transcription Factor Y, B (Beta) subunit
#=GS O17286/58-156      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A0M7RFF4/1-82    AC A0A0M7RFF4
#=GS A0A0M7RFF4/1-82    OS Caenorhabditis elegans
#=GS A0A0M7RFF4/1-82    DE Nuclear transcription Factor Y, B (Beta) subunit
#=GS A0A0M7RFF4/1-82    DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS I1GZ06/19-128      AC I1GZ06
#=GS I1GZ06/19-128      OS Brachypodium distachyon
#=GS I1GZ06/19-128      DE Uncharacterized protein
#=GS I1GZ06/19-128      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS A0A2G5VDQ9/66-165  AC A0A2G5VDQ9
#=GS A0A2G5VDQ9/66-165  OS Caenorhabditis nigoni
#=GS A0A2G5VDQ9/66-165  DE Uncharacterized protein
#=GS A0A2G5VDQ9/66-165  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8X3S4/70-169      AC A8X3S4
#=GS A8X3S4/70-169      OS Caenorhabditis briggsae
#=GS A8X3S4/70-169      DE Protein CBR-NFYB-1
#=GS A8X3S4/70-169      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS B4LVH4/33-153      AC B4LVH4
#=GS B4LVH4/33-153      OS Drosophila virilis
#=GS B4LVH4/33-153      DE Uncharacterized protein
#=GS B4LVH4/33-153      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JR67/33-153      AC B4JR67
#=GS B4JR67/33-153      OS Drosophila grimshawi
#=GS B4JR67/33-153      DE GH13827
#=GS B4JR67/33-153      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4I5Z3/33-156      AC B4I5Z3
#=GS B4I5Z3/33-156      OS Drosophila sechellia
#=GS B4I5Z3/33-156      DE GM17376
#=GS B4I5Z3/33-156      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3ML66/25-150      AC B3ML66
#=GS B3ML66/25-150      OS Drosophila ananassae
#=GS B3ML66/25-150      DE Uncharacterized protein
#=GS B3ML66/25-150      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4KIB0/33-154      AC B4KIB0
#=GS B4KIB0/33-154      OS Drosophila mojavensis
#=GS B4KIB0/33-154      DE Uncharacterized protein
#=GS B4KIB0/33-154      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A484B9L7/33-154  AC A0A484B9L7
#=GS A0A484B9L7/33-154  OS Drosophila navojoa
#=GS A0A484B9L7/33-154  DE Uncharacterized protein
#=GS A0A484B9L7/33-154  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila navojoa; 
#=GS A0A1W4V794/30-156  AC A0A1W4V794
#=GS A0A1W4V794/30-156  OS Drosophila ficusphila
#=GS A0A1W4V794/30-156  DE nuclear transcription factor Y subunit beta
#=GS A0A1W4V794/30-156  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0J9R473/33-156  AC A0A0J9R473
#=GS A0A0J9R473/33-156  OS Drosophila simulans
#=GS A0A0J9R473/33-156  DE Uncharacterized protein
#=GS A0A0J9R473/33-156  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NL38/33-156      AC B3NL38
#=GS B3NL38/33-156      OS Drosophila erecta
#=GS B3NL38/33-156      DE Uncharacterized protein
#=GS B3NL38/33-156      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PB24/33-156      AC B4PB24
#=GS B4PB24/33-156      OS Drosophila yakuba
#=GS B4PB24/33-156      DE Uncharacterized protein
#=GS B4PB24/33-156      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 16
Q8ST61/33-156              ---GIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPHNEDGSSANDAGKQ
O17286/58-156              -----VLLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTITADDLLTAMEATGFDNYAEPMRIFLQKYRQAHKITG-----------------------
A0A0M7RFF4/1-82            ----------------------MKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRKTITADDLLTAMEATGFDNYAEPMRIFLQKYRQAHKITG-----------------------
I1GZ06/19-128              ---VVEVREQDRLMPIANVTRIMRRMLPPHAKISDNAKELIQESTSEFISFLTGEANERCLKSRRKILTAEDILWAMDNLGFDDYVQPFTAYLQRMRDIENNNGVGVVNNRLA--------------
A0A2G5VDQ9/66-165          ---DKPVLDQERYLPIANVTRLMKGQMDPQAKLAKDAKECVQECVSEFITFVASEAAEICNQQKRKTIMADDLLTAMESLGFDNFAEPMRIFLQKYRQVHRIT------------------------
A8X3S4/70-169              ---DKPVLDQERYLPIANVTRLMKGQMDPQAKLAKDAKECVQECVSEFITFVASEAAEICNQQKRKTIMADDLLTAMESLGFDNFAEPMRIFLQKYRQVHRIT------------------------
B4LVH4/33-153              --HGSMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLEGSYMQTDDA---NESGK-
B4JR67/33-153              --HGSMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFNNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDSSYMQTDEG----EAGKQ
B4I5Z3/33-156              ---GIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYSHNEDGTSANDAGKQ
B3ML66/25-150              QDSGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDSSYAQNEDAGSTHD-GKQ
B4KIB0/33-154              --HGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDSSYMQSEDA---SESGKQ
A0A484B9L7/33-154          --HGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDSSYMQSEDA---SESGKQ
A0A1W4V794/30-156          QDGGIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLEASYSHNEDAGSASETGKQ
A0A0J9R473/33-156          ---GIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPHNEDGTSANDAGKQ
B3NL38/33-156              ---GIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDASYPQNEDGSSANEAGKQ
B4PB24/33-156              ---GIMLREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRKTVNGDDLLVAFSNLGFDNYVEPLSIYLQKYRESNKSDRNLFLDANYPHNEDGSSANEAGKQ
#=GC scorecons             0003235457575677475455984465556967789797699779999797579959564445997646898949545699988689647799879645645322222122111121000111221
#=GC scorecons_70          _________*_*__**_*____**_______*********_***********_***_*______****__****_*___******_**__*******___*__________________________
#=GC scorecons_80          ______________________**_______*_****_**_**********__***_*______***___****_*____*****_**__*******______________________________
#=GC scorecons_90          ______________________**_______*____*_*__**__****_*___**_*______**____**_*_*____***____*____***_*______________________________
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