# STOCKHOLM 1.0
#=GF ID 1.10.1520.10/FF/000023
#=GF DE Endoribonuclease dcr-1
#=GF AC 1.10.1520.10/FF/000023
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.055
#=GS P34529/1375-1523_1565-1608            AC P34529
#=GS P34529/1375-1523_1565-1608            OS Caenorhabditis elegans
#=GS P34529/1375-1523_1565-1608            DE Endoribonuclease dcr-1
#=GS P34529/1375-1523_1565-1608            DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P34529/1375-1523_1565-1608            DR GO; GO:0000003; GO:0000737; GO:0002119; GO:0004525; GO:0004530; GO:0005515; GO:0005634; GO:0005737; GO:0005829; GO:0006309; GO:0006401; GO:0008355; GO:0030422; GO:0031050; GO:0031054; GO:0035262; GO:0040034; GO:2000636; 
#=GS E9HFG3/1150-1303                      AC E9HFG3
#=GS E9HFG3/1150-1303                      OS Daphnia pulex
#=GS E9HFG3/1150-1303                      DE Uncharacterized protein
#=GS E9HFG3/1150-1303                      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS W4ZJ51/1272-1351_1410-1448_1484-1518  AC W4ZJ51
#=GS W4ZJ51/1272-1351_1410-1448_1484-1518  OS Strongylocentrotus purpuratus
#=GS W4ZJ51/1272-1351_1410-1448_1484-1518  DE Uncharacterized protein
#=GS W4ZJ51/1272-1351_1410-1448_1484-1518  DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS F6XSF3/1277-1351_1510-1543            AC F6XSF3
#=GS F6XSF3/1277-1351_1510-1543            OS Ciona intestinalis
#=GS F6XSF3/1277-1351_1510-1543            DE Uncharacterized protein
#=GS F6XSF3/1277-1351_1510-1543            DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS D2KU68/1254-1333_1392-1430_1466-1500  AC D2KU68
#=GS D2KU68/1254-1333_1392-1430_1466-1500  OS Hemicentrotus pulcherrimus
#=GS D2KU68/1254-1333_1392-1430_1466-1500  DE Dicer
#=GS D2KU68/1254-1333_1392-1430_1466-1500  DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Hemicentrotus; Hemicentrotus pulcherrimus; 
#=GS A0A1I7U3K6/1410-1552_1594-1637        AC A0A1I7U3K6
#=GS A0A1I7U3K6/1410-1552_1594-1637        OS Caenorhabditis tropicalis
#=GS A0A1I7U3K6/1410-1552_1594-1637        DE Uncharacterized protein
#=GS A0A1I7U3K6/1410-1552_1594-1637        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0N0F3/1393-1538_1581-1624            AC G0N0F3
#=GS G0N0F3/1393-1538_1581-1624            OS Caenorhabditis brenneri
#=GS G0N0F3/1393-1538_1581-1624            DE CBN-DCR-1 protein
#=GS G0N0F3/1393-1538_1581-1624            DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3MG01/1405-1554_1596-1639            AC E3MG01
#=GS E3MG01/1405-1554_1596-1639            OS Caenorhabditis remanei
#=GS E3MG01/1405-1554_1596-1639            DE CRE-DCR-1 protein
#=GS E3MG01/1405-1554_1596-1639            DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A2G5ULH1/1405-1538_1580-1623        AC A0A2G5ULH1
#=GS A0A2G5ULH1/1405-1538_1580-1623        OS Caenorhabditis nigoni
#=GS A0A2G5ULH1/1405-1538_1580-1623        DE Uncharacterized protein
#=GS A0A2G5ULH1/1405-1538_1580-1623        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8Y3J1/1509-1642_1684-1727            AC A8Y3J1
#=GS A8Y3J1/1509-1642_1684-1727            OS Caenorhabditis briggsae
#=GS A8Y3J1/1509-1642_1684-1727            DE Protein CBR-DCR-1
#=GS A8Y3J1/1509-1642_1684-1727            DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A1I7U3K5/1410-1552_1594-1637        AC A0A1I7U3K5
#=GS A0A1I7U3K5/1410-1552_1594-1637        OS Caenorhabditis tropicalis
#=GS A0A1I7U3K5/1410-1552_1594-1637        DE Uncharacterized protein
#=GS A0A1I7U3K5/1410-1552_1594-1637        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A2G5UM69/1414-1547_1589-1632        AC A0A2G5UM69
#=GS A0A2G5UM69/1414-1547_1589-1632        OS Caenorhabditis nigoni
#=GS A0A2G5UM69/1414-1547_1589-1632        DE Uncharacterized protein
#=GS A0A2G5UM69/1414-1547_1589-1632        DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 12
P34529/1375-1523_1565-1608                    -QRSEEYVSHIDSDIGLGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLL-DQHEGKLSFARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYIPTCDFKAPNTDDAEEKDNEIERILDGQVIEEKPENKTQQHISDKSIADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKD
E9HFG3/1150-1303                              ------------------PSPGEVLRALTTSVANAGYDLERLEVIGDSFLKLAASIRVYCDSPSHFHEGKMTHLRMLQVCNRNLFKLGKIKSIPRFVVATKFVAKENWLPPCYFPN------NTDD---DCMELE-------TDEKPNAKLWQRISKKSVADSVEALFGLYLTLHGIKGALKVMRWMG-------
W4ZJ51/1272-1351_1410-1448_1484-1518          ------------------PSPTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYP-HLDEGKLSFLRSKQVSNFNLYCLGDKKALA-----HKMQVSDQ----CWEENSD----DFSDEEIDETKAECPDDFFAREEKDKEQWQHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAW---------
F6XSF3/1277-1351_1510-1543                    ------------------PGPGLILQALTLSNASDGFNLERLEMLGDSFLKHAVTVYLYCTYP-ESHEGKLSYMRSKKVSNYNLYRIGKQFGLA---------------------------------------------------------QHSLADKSIADCVEALLGAYLTTCGHRSAQLLLC----------
D2KU68/1254-1333_1392-1430_1466-1500          ------------------PSPTIILQSLTMSNSSDGFNLERLEMLGDSFLKQAVTAYLYCTYP-HLDEGKLSFLRSKQVSNFNLYCLGEKKALA-----HKMQVSDQ----CWEENSD----DFSDEEIDETKAECPDDFFAREEKDKEQWQHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAW---------
A0A1I7U3K6/1410-1552_1594-1637                -------VSHVDSEVAYGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQ-DQHEGKLSFARSKEVSNCNLYRLGRKLGIPQLIFANKFDAHDSWLPPCYVPTYNFKAPNTEDAEEKDKEIERILNGQAIEEKPENKTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKD
G0N0F3/1393-1538_1581-1624                    ----QEAISHVDSDVGMGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQ-DQHEGKLSFARSKEVSNCNLYRLGKKLGIPQLIIANKFDAHDSWLPPCYIPTCNFKAPNTDDAEEKDIEMERLLNGETIEEKPQNKTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKD
E3MG01/1405-1554_1596-1639                    KERENETVSHIDEDVGMGVSPCLLLTALTTSNAADGMSLERFETIGDSFLKFATTDYLYHTLQ-DQHEGKLSFARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNNSDAEEKDKEIERILNGQTIEEKPEDKTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKD
A0A2G5ULH1/1405-1538_1580-1623                ----------------MGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQ-EQHEGKLSWARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMERILSGQTIEEKPENKTQQNISDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKD
A8Y3J1/1509-1642_1684-1727                    ----------------MGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQ-EQHEGKLSWARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMERILSGQTIEEKPENKTQQNISDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKD
A0A1I7U3K5/1410-1552_1594-1637                -------VSHVDSEVAYGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQ-DQHEGKLSFARSKEVSNCNLYRLGRKLGIPQLIFANKFDAHDSWLPPCYVPTYNFKAPNTEDAEEKDKEIERILNGQAIEEKPENKTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKD
A0A2G5UM69/1414-1547_1589-1632                ----------------MGVSPCLLLTALTTSNASDGMSLERFETIGDSFLKFATTDYLYHTLQ-EQHEGKLSWARSKEVSNCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDFKAPNTSDAEEKDKEMERILSGQTIEEKPENKTQQNISDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKD
#=GC scorecons                                000000000000000012579455946995976679559996956999999495747795745053699977549775979499857955456622223364343533333642442322224336342432436322222235664334376467797899469996947945494556646736332222222
#=GC scorecons_70                             ___________________**___*_***_***_**__*****_*******_*_*_***_*_____******__***_***_***_**____*_______*__________*_____________*________*_________**_____**_********_******_**___*___**_**_*_________
#=GC scorecons_80                             ___________________**___*__**_**__**__***_*__******_*_*_***_*______*****__**__***_***_**___________________________________________________________________*******__***_*__*___*_______*___________
#=GC scorecons_90                             ____________________*___*__**_*____*__***_*__******_*_____*________***____*___*_*_***__*_____________________________________________________________________*_***__***_*__*___*___________________
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