# STOCKHOLM 1.0
#=GF ID 1.10.150.670/FF/000007
#=GF DE Crossover junction endonuclease EME1B
#=GF AC 1.10.150.670/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 91.874
#=GS Q84M98/437-531      AC Q84M98
#=GS Q84M98/437-531      OS Arabidopsis thaliana
#=GS Q84M98/437-531      DE Crossover junction endonuclease EME1A
#=GS Q84M98/437-531      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q84M98/437-531      DR GO; GO:0004519; GO:0006281; GO:0006310; 
#=GS Q0J9J6/551-646      AC Q0J9J6
#=GS Q0J9J6/551-646      OS Oryza sativa Japonica Group
#=GS Q0J9J6/551-646      DE Crossover junction endonuclease EME1
#=GS Q0J9J6/551-646      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q0J9J6/551-646      DR GO; GO:0009411; GO:0009644; GO:0010332; 
#=GS C5H8J1/443-537      AC C5H8J1
#=GS C5H8J1/443-537      OS Arabidopsis thaliana
#=GS C5H8J1/443-537      DE Crossover junction endonuclease EME1B
#=GS C5H8J1/443-537      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS C5H8J1/443-537      DR GO; GO:0004519; GO:0006281; GO:0006310; 
#=GS A0A1P8B1X7/296-390  AC A0A1P8B1X7
#=GS A0A1P8B1X7/296-390  OS Arabidopsis thaliana
#=GS A0A1P8B1X7/296-390  DE Essential meiotic endonuclease 1B
#=GS A0A1P8B1X7/296-390  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A0D1E1Y0/745-843  AC A0A0D1E1Y0
#=GS A0A0D1E1Y0/745-843  OS Ustilago maydis 521
#=GS A0A0D1E1Y0/745-843  DE Uncharacterized protein
#=GS A0A0D1E1Y0/745-843  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS H3H1S0/447-540      AC H3H1S0
#=GS H3H1S0/447-540      OS Phytophthora ramorum
#=GS H3H1S0/447-540      DE Uncharacterized protein
#=GS H3H1S0/447-540      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS F4NYV9/599-690      AC F4NYV9
#=GS F4NYV9/599-690      OS Batrachochytrium dendrobatidis JAM81
#=GS F4NYV9/599-690      DE Uncharacterized protein
#=GS F4NYV9/599-690      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS V4M1N8/464-557      AC V4M1N8
#=GS V4M1N8/464-557      OS Eutrema salsugineum
#=GS V4M1N8/464-557      DE Uncharacterized protein
#=GS V4M1N8/464-557      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A0D3DW29/439-532  AC A0A0D3DW29
#=GS A0A0D3DW29/439-532  OS Brassica oleracea var. oleracea
#=GS A0A0D3DW29/439-532  DE Uncharacterized protein
#=GS A0A0D3DW29/439-532  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A087GSI7/498-590  AC A0A087GSI7
#=GS A0A087GSI7/498-590  OS Arabis alpina
#=GS A0A087GSI7/498-590  DE Uncharacterized protein
#=GS A0A087GSI7/498-590  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS R0G0X5/442-535      AC R0G0X5
#=GS R0G0X5/442-535      OS Capsella rubella
#=GS R0G0X5/442-535      DE Uncharacterized protein
#=GS R0G0X5/442-535      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7LBY8/356-451      AC D7LBY8
#=GS D7LBY8/356-451      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LBY8/356-451      DE Uncharacterized protein
#=GS D7LBY8/356-451      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS I1PQA5/547-642      AC I1PQA5
#=GS I1PQA5/547-642      OS Oryza glaberrima
#=GS I1PQA5/547-642      DE Uncharacterized protein
#=GS I1PQA5/547-642      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS B8AVJ8/210-306      AC B8AVJ8
#=GS B8AVJ8/210-306      OS Oryza sativa Indica Group
#=GS B8AVJ8/210-306      DE Uncharacterized protein
#=GS B8AVJ8/210-306      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GF SQ 14
Q84M98/437-531              -DKHLIRE---------SIWLKVLVAIPKVQPRYAIAVSKKYPSLKSLLKVYMDPNISVHEKEFLLKDLKVENLVGR-DTS-----VGEACSKRIYRVLMSLDGTIKTDDV
Q0J9J6/551-646              -DKDRIKK---------SAWLKSLVAIPGVSPGQAIAIEKKYPSMRSLLNVYMDDSKSVHEKEHLLEDLRLEGPLGDFKRR-----LGPACSKKVYTILMAQNGAAEVEVD
C5H8J1/443-537              -DKHLIKK---------SPWLKALVAIPKVQPRYALAVWKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKVEGLVGG-DIR-----LGEICSKRIYRVLMSHDGAIKTDDV
A0A1P8B1X7/296-390          -DKHLIKK---------SPWLKALVAIPKVQPRYALAVWKKYPSMKSLLKVYMDRNKSVHEKEFLLKDLKVEGLVGG-DIR-----LGEICSKRIYRVLMSHDGAIKTDDV
A0A0D1E1Y0/745-843          -----------TSCCSAAIYALMLEQIPRVTPAISQSITTIYPSLHALLRAYQSCN-DESEQRAMLSSIQVVSNRDGTERRANRTNLGLQLSKRIHAVIRGTNADLLINKP
H3H1S0/447-540              --SFRVTRTGATASACANAWLRMLQVIPGVSEDKAQCLLDHFPTFDSLMRAYRDPTLSRAQKEDLVSD-KLH------DVR-----VQRALSKRIYVVFCEENPDAMI---
F4NYV9/599-690              -DKVKTGK------SASDSWQKALEQIPQVTSAKAAAICEKYPTFSKLMQAYAACD-SKQKAESLLVGIKASGTGHA---------IGLSLSKQVSAVFCCTDGSELMK--
V4M1N8/464-557              --KHLIKK---------SPWLKALVAIPKVQPRYAIAVWKKYPSMKSLLSVYMDPNKSIHDKEFLLKDLKVEGLVGG-DIR-----LGEVCSKRIYRVLMSHNGAIKTDDV
A0A0D3DW29/439-532          -DKHLIKK---------SPWLKALVAIPKVQPRYAVAVWKKYPSMKSLLKVYMDPNISIHEKEFLLKDLKVEGLVGG-DIR-----LGEVCSKRIYRVLMSPSGTIKTDD-
A0A087GSI7/498-590          --KHLIKK---------SPWLKALVAIPKVQPRYAVAVWKKYPSMKSLLKVYMDPNISVHEKEFLLKDLKVEGLVGA-EIR-----LGEVCSKRIYRVLMSPSGAIKTDD-
R0G0X5/442-535              --KHLIKK---------SPWLKALVAIPKVQPRYAVAVWKKYPSMKSLLKAYMDPNKSVHEKEFLLQDLKVEGLVGG-DRR-----LGEICSKRIYRVLMSHNGAIKTDDV
D7LBY8/356-451              ADKHLVRE---------SLWLKVLVAIPKVQPRYAVAVSKKYPSLKSLLKVYMDPNISVHEKEFLLKDLRVENLVGE-DKM-----VGDACSKRIYRVLMSLDGTIKTDDV
I1PQA5/547-642              -DKDRIKK---------SAWLKSLVAIPGVSPGQAIAIEKKYPSMRSLLNVYMDDSKSVHEKEHLLEDLRLEGPLGDFKRR-----LGPACSKKVYTILMAQNGAAEVEVD
B8AVJ8/210-306              VDKDRIKK---------SAWLKSLVAIPGVSPGQAIAIEKKYPSMRSLLNVYMDDSKSVHEKEHLLEDLRLEGPLGDFKRR-----LGPACSKKVYTILMAQNGAAEVEVD
#=GC scorecons              035334350000000005475649459949464373662558965469746946352745667377365654433430435000006734599676476443564435421
#=GC scorecons_70           ___________________*_*_*__**_*____*_**___***__***__*_____*__***_**_*_*________________**___*****_*_____*_______
#=GC scorecons_80           ___________________*___*__**_*____*______**____**__*_____*____*_**_____________________*___**_*__*_____________
#=GC scorecons_90           _______________________*__**_*___________**____*___*_______________________________________**__________________
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