# STOCKHOLM 1.0
#=GF ID 1.10.150.20/FF/000063
#=GF DE DNA repair protein RAD1
#=GF AC 1.10.150.20/FF/000063
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.565
#=GS Q7RW07/886-959      AC Q7RW07
#=GS Q7RW07/886-959      OS Neurospora crassa OR74A
#=GS Q7RW07/886-959      DE MUS38
#=GS Q7RW07/886-959      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS C8VA33/914-983      AC C8VA33
#=GS C8VA33/914-983      OS Aspergillus nidulans FGSC A4
#=GS C8VA33/914-983      DE Single-stranded DNA endonuclease (Eurofung)
#=GS C8VA33/914-983      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS Q5ASL7/871-940      AC Q5ASL7
#=GS Q5ASL7/871-940      OS Aspergillus nidulans FGSC A4
#=GS Q5ASL7/871-940      DE Uncharacterized protein
#=GS Q5ASL7/871-940      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1D9QB81/858-929  AC A0A1D9QB81
#=GS A0A1D9QB81/858-929  OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A0A1D9QB81/858-929  DE Uncharacterized protein
#=GS A0A1D9QB81/858-929  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS G2Y5H4/321-392      AC G2Y5H4
#=GS G2Y5H4/321-392      OS Botrytis cinerea T4
#=GS G2Y5H4/321-392      DE Uncharacterized protein
#=GS G2Y5H4/321-392      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS W9C6J0/857-927      AC W9C6J0
#=GS W9C6J0/857-927      OS Sclerotinia borealis F-4128
#=GS W9C6J0/857-927      DE MUS38-like protein
#=GS W9C6J0/857-927      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia borealis; 
#=GS G4U953/880-953      AC G4U953
#=GS G4U953/880-953      OS Neurospora tetrasperma FGSC 2509
#=GS G4U953/880-953      DE DNA repair protein
#=GS G4U953/880-953      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A2I1CEM8/904-974  AC A0A2I1CEM8
#=GS A0A2I1CEM8/904-974  OS Aspergillus novofumigatus IBT 16806
#=GS A0A2I1CEM8/904-974  DE Putative DNA repair protein RAD1
#=GS A0A2I1CEM8/904-974  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus novofumigatus; 
#=GS A1DL73/904-974      AC A1DL73
#=GS A1DL73/904-974      OS Aspergillus fischeri NRRL 181
#=GS A1DL73/904-974      DE DNA repair protein RAD1, putative
#=GS A1DL73/904-974      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fischeri; 
#=GS A0A0K8L9B2/907-977  AC A0A0K8L9B2
#=GS A0A0K8L9B2/907-977  OS Aspergillus udagawae
#=GS A0A0K8L9B2/907-977  DE DNA repair protein rad16
#=GS A0A0K8L9B2/907-977  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus udagawae; 
#=GS A0A3R7IZG9/912-982  AC A0A3R7IZG9
#=GS A0A3R7IZG9/912-982  OS Aspergillus turcosus
#=GS A0A3R7IZG9/912-982  DE Uncharacterized protein
#=GS A0A3R7IZG9/912-982  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus turcosus; 
#=GS A0A0S7DMY5/904-974  AC A0A0S7DMY5
#=GS A0A0S7DMY5/904-974  OS Aspergillus lentulus
#=GS A0A0S7DMY5/904-974  DE DNA repair protein rad16
#=GS A0A0S7DMY5/904-974  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus lentulus; 
#=GS B0YDJ5/904-974      AC B0YDJ5
#=GS B0YDJ5/904-974      OS Aspergillus fumigatus A1163
#=GS B0YDJ5/904-974      DE DNA repair protein RAD1, putative
#=GS B0YDJ5/904-974      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A1CMR5/906-976      AC A1CMR5
#=GS A1CMR5/906-976      OS Aspergillus clavatus NRRL 1
#=GS A1CMR5/906-976      DE DNA repair protein RAD1, putative
#=GS A1CMR5/906-976      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus clavatus; 
#=GS A0A3D8REY0/910-979  AC A0A3D8REY0
#=GS A0A3D8REY0/910-979  OS Aspergillus mulundensis
#=GS A0A3D8REY0/910-979  DE Single-stranded DNA endonuclease
#=GS A0A3D8REY0/910-979  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus mulundensis; 
#=GS A0A0B0DMU0/886-959  AC A0A0B0DMU0
#=GS A0A0B0DMU0/886-959  OS Neurospora crassa
#=GS A0A0B0DMU0/886-959  DE DNA repair protein
#=GS A0A0B0DMU0/886-959  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS F8MY10/886-959      AC F8MY10
#=GS F8MY10/886-959      OS Neurospora tetrasperma FGSC 2508
#=GS F8MY10/886-959      DE Uncharacterized protein
#=GS F8MY10/886-959      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS O74126/818-891      AC O74126
#=GS O74126/818-891      OS Neurospora crassa
#=GS O74126/818-891      DE MUS38
#=GS O74126/818-891      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS A7EJV3/858-929      AC A7EJV3
#=GS A7EJV3/858-929      OS Sclerotinia sclerotiorum 1980 UF-70
#=GS A7EJV3/858-929      DE Uncharacterized protein
#=GS A7EJV3/858-929      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia; Sclerotinia sclerotiorum; 
#=GS M7U4N6/858-929      AC M7U4N6
#=GS M7U4N6/858-929      OS Botrytis cinerea BcDW1
#=GS M7U4N6/858-929      DE Putative mus38-like protein
#=GS M7U4N6/858-929      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS A0A384JU05/858-929  AC A0A384JU05
#=GS A0A384JU05/858-929  OS Botrytis cinerea B05.10
#=GS A0A384JU05/858-929  DE Bcrad1
#=GS A0A384JU05/858-929  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis; Botrytis cinerea; 
#=GS Q4WCV1/904-974      AC Q4WCV1
#=GS Q4WCV1/904-974      OS Aspergillus fumigatus Af293
#=GS Q4WCV1/904-974      DE DNA repair protein RAD1, putative
#=GS Q4WCV1/904-974      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A0J5PJB3/904-974  AC A0A0J5PJB3
#=GS A0A0J5PJB3/904-974  OS Aspergillus fumigatus Z5
#=GS A0A0J5PJB3/904-974  DE DNA repair protein RAD1
#=GS A0A0J5PJB3/904-974  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A229WAB7/904-974  AC A0A229WAB7
#=GS A0A229WAB7/904-974  OS Aspergillus fumigatus
#=GS A0A229WAB7/904-974  DE Uncharacterized protein
#=GS A0A229WAB7/904-974  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus fumigatus; 
#=GS A0A397GTZ5/912-982  AC A0A397GTZ5
#=GS A0A397GTZ5/912-982  OS Aspergillus turcosus
#=GS A0A397GTZ5/912-982  DE Uncharacterized protein
#=GS A0A397GTZ5/912-982  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus turcosus; 
#=GF SQ 25
Q7RW07/886-959              -GAVNGGSTFNMEAQEMLGKVPGVTPKNIRNITAEAENVREVANMEVEELGRLVGREAAGKIVEFFKKDVLEDYS
C8VA33/914-983              --SGIEHRTFNLLPQEMLRAVPGVSPQVLERLILETGNISEIANMSVEELDPFMGREAARQVVGFFRKSVFD---
Q5ASL7/871-940              --SGIEHRTFNLLPQEMLRAVPGVSPQVLERLILETGNISEIANMSVEELDPFMGREAARQVVGFFRKSVFD---
A0A1D9QB81/858-929          GGASAEDQAFNREPQDMLRVVPGVTGKNLGNLVVELGNIKEVANASLEELEPAVGKEAGRQIHRFFNKSVLE---
G2Y5H4/321-392              GGASAEDQVFNREPQDMLRVVPGVTGKNLGNLIMELGSIKEVANADLEELEPVVGKEAGRQIHRFFNKSVLE---
W9C6J0/857-927              GGASAEDQAFNREPQDMLRVVAGVTGKNLGNLVSDLGSIKEVANASLEELEPMVGKEAGRQIYQFFNKSVL----
G4U953/880-953              -GAVNGGSTFNMEAQEMLGKVPGVTPKNIRSITAEAENVREVANMEVEELGRLVGREAAGKIVEFFKKDVLEDYS
A0A2I1CEM8/904-974          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGREAARKIVGFFRKDLFDN--
A1DL73/904-974              --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILEMGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A0A0K8L9B2/907-977          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLVLETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A0A3R7IZG9/912-982          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGKEAARKIVGFFRKNVFDT--
A0A0S7DMY5/904-974          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLVLETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
B0YDJ5/904-974              --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A1CMR5/906-976              --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNINEIANMDVEQLDPLVGREAARKIVGFFRKSVFET--
A0A3D8REY0/910-979          --SGIEHRTFNLLPQEMLRAVPGVSPQVLERLILETGNIAEIANMSVEELDPFMGKEAARQVMGFFRKSVFD---
A0A0B0DMU0/886-959          -GAVNGGSTFNMEAQEMLGKVPGVTPKNIRNITAEAENVREVANMEVEELGRLVGREAAGKIVEFFKKDVLEDYS
F8MY10/886-959              -GAVNGGSTFNMEAQEMLGKVPGVTPKNIRSITAEAENVREVANMEVEELGRLVGREAAGKIVEFFKKDVLEDYS
O74126/818-891              -GAVNGGSTFNMEAQEMLGKVPGVTPKNIRNITAEAENVREVANMEVEELGRLVGREAAGKIVEFFKKDVLEDYS
A7EJV3/858-929              GGASAEDQAFNREPQDMLRVVPGVTGKNLGNLVVELGNIKEVANASLEELEPAVGKEAGRQIHRFFNKSVLE---
M7U4N6/858-929              GGASAEDQVFNREPQDMLRVVPGVTGKNLGNLIMELGSIKEVANADLEELEPVVGKEAGRQIHRFFNKSVLE---
A0A384JU05/858-929          GGASAEDQVFNREPQDMLRVVPGVTGKNLGNLIMELGSIKEVANADLEELEPVVGKEAGRQIHRFFNKSVLE---
Q4WCV1/904-974              --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A0A0J5PJB3/904-974          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A0A229WAB7/904-974          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGREAARKIVGFFRKNLFDN--
A0A397GTZ5/912-982          --AGIEHRTFNALPQDMLRAVPGVTPKVLERLILETGNISEIANMDVEQLDPLIGKEAARKIVGFFRKNVFDT--
#=GC scorecons              027446456993469799649899767575575484677497996569695656979966685499595766100
#=GC scorecons_70           __*__*__***__******_*****_*_*__*__*_***_****__****_*_*********__**_*_***___
#=GC scorecons_80           __*______**___****__*****_*_______*__**_*_**___*_*____****___*__**_*_______
#=GC scorecons_90           _________**___*_**__****__________*_____*_**___*_*____*_**___*__**_*_______
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