# STOCKHOLM 1.0
#=GF ID 1.10.150.20/FF/000058
#=GF DE Helicase, POLQ like
#=GF AC 1.10.150.20/FF/000058
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 81.587
#=GS Q2VPA6/985-1027       AC Q2VPA6
#=GS Q2VPA6/985-1027       OS Mus musculus
#=GS Q2VPA6/985-1027       DE Helicase POLQ-like
#=GS Q2VPA6/985-1027       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q2VPA6/985-1027       DR GO; GO:0000724; GO:0006259; GO:0017116; GO:0017117; 
#=GS Q2VPA6/985-1027       DR EC; 3.6.4.12; 
#=GS Q8TDG4/1027-1079      AC Q8TDG4
#=GS Q8TDG4/1027-1079      OS Homo sapiens
#=GS Q8TDG4/1027-1079      DE Helicase POLQ-like
#=GS Q8TDG4/1027-1079      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q8TDG4/1027-1079      DR GO; GO:0000724; GO:0005515; 
#=GS Q8TDG4/1027-1079      DR EC; 3.6.4.12; 
#=GS T1G1Y2/734-777        AC T1G1Y2
#=GS T1G1Y2/734-777        OS Helobdella robusta
#=GS T1G1Y2/734-777        DE Uncharacterized protein
#=GS T1G1Y2/734-777        DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS A0A139WMF9/1047-1090  AC A0A139WMF9
#=GS A0A139WMF9/1047-1090  OS Tribolium castaneum
#=GS A0A139WMF9/1047-1090  DE Helicase POLQ-like
#=GS A0A139WMF9/1047-1090  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS D6WC99/1050-1093      AC D6WC99
#=GS D6WC99/1050-1093      OS Tribolium castaneum
#=GS D6WC99/1050-1093      DE Helicase POLQ-like
#=GS D6WC99/1050-1093      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS C3YIV8/1114-1156      AC C3YIV8
#=GS C3YIV8/1114-1156      OS Branchiostoma floridae
#=GS C3YIV8/1114-1156      DE Uncharacterized protein
#=GS C3YIV8/1114-1156      DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS W5N2N2/998-1042       AC W5N2N2
#=GS W5N2N2/998-1042       OS Lepisosteus oculatus
#=GS W5N2N2/998-1042       DE Uncharacterized protein
#=GS W5N2N2/998-1042       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS W5NXA3/989-1042       AC W5NXA3
#=GS W5NXA3/989-1042       OS Ovis aries
#=GS W5NXA3/989-1042       DE Uncharacterized protein
#=GS W5NXA3/989-1042       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS A0A1S3FIF2/990-1043   AC A0A1S3FIF2
#=GS A0A1S3FIF2/990-1043   OS Dipodomys ordii
#=GS A0A1S3FIF2/990-1043   DE helicase POLQ-like isoform X1
#=GS A0A1S3FIF2/990-1043   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys; Dipodomys ordii; 
#=GS A0A3Q0CVX2/985-1037   AC A0A3Q0CVX2
#=GS A0A3Q0CVX2/985-1037   OS Mesocricetus auratus
#=GS A0A3Q0CVX2/985-1037   DE helicase POLQ-like
#=GS A0A3Q0CVX2/985-1037   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Mesocricetus; Mesocricetus auratus; 
#=GS A0A2K5EED3/1027-1079  AC A0A2K5EED3
#=GS A0A2K5EED3/1027-1079  OS Aotus nancymaae
#=GS A0A2K5EED3/1027-1079  DE Uncharacterized protein
#=GS A0A2K5EED3/1027-1079  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A1A6HLA8/821-875    AC A0A1A6HLA8
#=GS A0A1A6HLA8/821-875    OS Neotoma lepida
#=GS A0A1A6HLA8/821-875    DE Uncharacterized protein
#=GS A0A1A6HLA8/821-875    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Neotominae; Neotoma; Neotoma lepida; 
#=GS E9PT19/981-1034       AC E9PT19
#=GS E9PT19/981-1034       OS Rattus norvegicus
#=GS E9PT19/981-1034       DE Helicase, POLQ-like
#=GS E9PT19/981-1034       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A2K5SBV9/1026-1078  AC A0A2K5SBV9
#=GS A0A2K5SBV9/1026-1078  OS Cebus capucinus imitator
#=GS A0A2K5SBV9/1026-1078  DE Uncharacterized protein
#=GS A0A2K5SBV9/1026-1078  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A061IKS3/1015-1067  AC A0A061IKS3
#=GS A0A061IKS3/1015-1067  OS Cricetulus griseus
#=GS A0A061IKS3/1015-1067  DE Helicase POLQ
#=GS A0A061IKS3/1015-1067  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS A0A2I3HFK5/1027-1079  AC A0A2I3HFK5
#=GS A0A2I3HFK5/1027-1079  OS Nomascus leucogenys
#=GS A0A2I3HFK5/1027-1079  DE Uncharacterized protein
#=GS A0A2I3HFK5/1027-1079  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2K6UWP3/988-1040   AC A0A2K6UWP3
#=GS A0A2K6UWP3/988-1040   OS Saimiri boliviensis boliviensis
#=GS A0A2K6UWP3/988-1040   DE Helicase, POLQ like
#=GS A0A2K6UWP3/988-1040   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS F7FKP0/1027-1079      AC F7FKP0
#=GS F7FKP0/1027-1079      OS Callithrix jacchus
#=GS F7FKP0/1027-1079      DE Helicase POLQ-like
#=GS F7FKP0/1027-1079      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS H2QZF4/1027-1079      AC H2QZF4
#=GS H2QZF4/1027-1079      OS Pan troglodytes
#=GS H2QZF4/1027-1079      DE Uncharacterized protein
#=GS H2QZF4/1027-1079      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2I2ZEV3/1027-1079  AC A0A2I2ZEV3
#=GS A0A2I2ZEV3/1027-1079  OS Gorilla gorilla gorilla
#=GS A0A2I2ZEV3/1027-1079  DE Helicase, POLQ like
#=GS A0A2I2ZEV3/1027-1079  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2R8Z8J2/1027-1079  AC A0A2R8Z8J2
#=GS A0A2R8Z8J2/1027-1079  OS Pan paniscus
#=GS A0A2R8Z8J2/1027-1079  DE Uncharacterized protein
#=GS A0A2R8Z8J2/1027-1079  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS W5N2N8/934-978        AC W5N2N8
#=GS W5N2N8/934-978        OS Lepisosteus oculatus
#=GS W5N2N8/934-978        DE Uncharacterized protein
#=GS W5N2N8/934-978        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS G3QZT9/1027-1079      AC G3QZT9
#=GS G3QZT9/1027-1079      OS Gorilla gorilla gorilla
#=GS G3QZT9/1027-1079      DE Helicase, POLQ like
#=GS G3QZT9/1027-1079      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS G1RCZ9/1027-1079      AC G1RCZ9
#=GS G1RCZ9/1027-1079      OS Nomascus leucogenys
#=GS G1RCZ9/1027-1079      DE Uncharacterized protein
#=GS G1RCZ9/1027-1079      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2R8PBW7/960-1012   AC A0A2R8PBW7
#=GS A0A2R8PBW7/960-1012   OS Callithrix jacchus
#=GS A0A2R8PBW7/960-1012   DE Uncharacterized protein
#=GS A0A2R8PBW7/960-1012   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2K5EEM4/960-1012   AC A0A2K5EEM4
#=GS A0A2K5EEM4/960-1012   OS Aotus nancymaae
#=GS A0A2K5EEM4/960-1012   DE Uncharacterized protein
#=GS A0A2K5EEM4/960-1012   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2I3GPL6/960-1012   AC A0A2I3GPL6
#=GS A0A2I3GPL6/960-1012   OS Nomascus leucogenys
#=GS A0A2I3GPL6/960-1012   DE Uncharacterized protein
#=GS A0A2I3GPL6/960-1012   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A2K5SBW0/959-1011   AC A0A2K5SBW0
#=GS A0A2K5SBW0/959-1011   OS Cebus capucinus imitator
#=GS A0A2K5SBW0/959-1011   DE Uncharacterized protein
#=GS A0A2K5SBW0/959-1011   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2K6UWQ9/958-1010   AC A0A2K6UWQ9
#=GS A0A2K6UWQ9/958-1010   OS Saimiri boliviensis boliviensis
#=GS A0A2K6UWQ9/958-1010   DE Helicase, POLQ like
#=GS A0A2K6UWQ9/958-1010   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS A0A2K6UWR4/481-534    AC A0A2K6UWR4
#=GS A0A2K6UWR4/481-534    OS Saimiri boliviensis boliviensis
#=GS A0A2K6UWR4/481-534    DE Helicase, POLQ like
#=GS A0A2K6UWR4/481-534    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS A0A2R8N9M9/481-534    AC A0A2R8N9M9
#=GS A0A2R8N9M9/481-534    OS Callithrix jacchus
#=GS A0A2R8N9M9/481-534    DE Uncharacterized protein
#=GS A0A2R8N9M9/481-534    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2K5SBW2/481-534    AC A0A2K5SBW2
#=GS A0A2K5SBW2/481-534    OS Cebus capucinus imitator
#=GS A0A2K5SBW2/481-534    DE Uncharacterized protein
#=GS A0A2K5SBW2/481-534    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS G2HJD4/482-535        AC G2HJD4
#=GS G2HJD4/482-535        OS Pan troglodytes
#=GS G2HJD4/482-535        DE DNA helicase HEL308
#=GS G2HJD4/482-535        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 33
Q2VPA6/985-1027               --LYNAGYRSIMHLAN-ANPEVLVKTIDHLSRRQARQIVSSAKMLL-----------
Q8TDG4/1027-1079              --LYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
T1G1Y2/734-777                --LYEAGYSNVQQIASITDHKQLVRNVKMIPTKTAKQLISSARMLV-----------
A0A139WMF9/1047-1090          -QLYNAGYKSIRSIAA-ANADSLVESIEYLPRRVAKQLIAAAKMLM-----------
D6WC99/1050-1093              -QLYNAGYKSIRSIAA-ANADSLVESIEYLPRRVAKQLIAAAKMLM-----------
C3YIV8/1114-1156              -QLYKAGYKTLQDLAH-AETESLVQNIQHMPRKVAYQIIAAAKVL------------
W5N2N2/998-1042               KQLYGAGYKTLAHLAN-ADPNLLIKAIENLSKRQANQIVASAKMLL-----------
W5NXA3/989-1042               -QLYSAGYKSLTHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A1S3FIF2/990-1043           -QLYNAGYKTLMHLAN-ANPEVLIKTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A3Q0CVX2/985-1037           --LYSAGYKSVTHLAN-ASPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K5EED3/1027-1079          --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLNEKAEALQEE-
A0A1A6HLA8/821-875            -QLYNAGYKSVMHLAN-ANPEVLVRTIDHLSRRQANQIVSSAKMLLHEKAEALQEEA
E9PT19/981-1034               --LYSAGYRSVVHLAN-ANPEVLVKTIDHLSRRQAKQIVSSAKMLLHEKAEALQEEA
A0A2K5SBV9/1026-1078          --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A061IKS3/1015-1067          --LYSAGYKSVMHLAN-ANPEVLVRTIGHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2I3HFK5/1027-1079          --LHSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K6UWP3/988-1040           --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
F7FKP0/1027-1079              --LYSAGYKSLTHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
H2QZF4/1027-1079              --LYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2I2ZEV3/1027-1079          --LYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2R8Z8J2/1027-1079          --LYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
W5N2N8/934-978                KQLYGAGYKTLAHLAN-ADPNLLIKAIENLSKRQANQIVASAKMLL-----------
G3QZT9/1027-1079              --LYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
G1RCZ9/1027-1079              --LHSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2R8PBW7/960-1012           --LYSAGYKSLTHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K5EEM4/960-1012           --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLNEKAEALQEE-
A0A2I3GPL6/960-1012           --LHSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K5SBW0/959-1011           --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K6UWQ9/958-1010           --LYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K6UWR4/481-534            -QLYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2R8N9M9/481-534            -QLYSAGYKSLTHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
A0A2K5SBW2/481-534            -QLYSAGYKSLMHLAN-ANPEVLIRTIDHLSRRQAKQIVSSAKMLLHEKAEALQEE-
G2HJD4/482-535                -QLYSAGYKSLMHLAN-ANPEVLVRTIDHLSRRQAKQIVSSAKMLLHERAEALQEE-
#=GC scorecons                029849997664679608666497658557677596977679889622222222220
#=GC scorecons_70             __**_******__**__**_*_**__*__****_***********____________
#=GC scorecons_80             __**_****____**__*____**__*__*__*_*_***__****____________
#=GC scorecons_90             __**_***______*__*____*___*_______*_*____****____________
//