# STOCKHOLM 1.0
#=GF ID 1.10.150.20/FF/000057
#=GF DE RAD2p Single-stranded DNA endonuclease
#=GF AC 1.10.150.20/FF/000057
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 83.321
#=GS P07276/849-912        AC P07276
#=GS P07276/849-912        OS Saccharomyces cerevisiae S288C
#=GS P07276/849-912        DE DNA repair protein RAD2
#=GS P07276/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P07276/849-912        DR GO; GO:0000014; GO:0000112; GO:0005515; GO:0006295; GO:0006366; 
#=GS A0A1D8PLU8/807-868    AC A0A1D8PLU8
#=GS A0A1D8PLU8/807-868    OS Candida albicans SC5314
#=GS A0A1D8PLU8/807-868    DE SsDNA endodeoxyribonuclease
#=GS A0A1D8PLU8/807-868    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A1D8PLU8/807-868    DR GO; GO:0000014; GO:0000112; GO:0006295; GO:0034644; 
#=GS Q5B2L4/886-961        AC Q5B2L4
#=GS Q5B2L4/886-961        OS Aspergillus nidulans FGSC A4
#=GS Q5B2L4/886-961        DE Single-stranded DNA endonuclease (Eurofung)
#=GS Q5B2L4/886-961        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A1U8QS55/886-961    AC A0A1U8QS55
#=GS A0A1U8QS55/886-961    OS Aspergillus nidulans FGSC A4
#=GS A0A1U8QS55/886-961    DE Uncharacterized protein
#=GS A0A1U8QS55/886-961    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS A0A0D1DU59/1112-1181  AC A0A0D1DU59
#=GS A0A0D1DU59/1112-1181  OS Ustilago maydis 521
#=GS A0A0D1DU59/1112-1181  DE Uncharacterized protein
#=GS A0A0D1DU59/1112-1181  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS Q5KPE3/961-1030       AC Q5KPE3
#=GS Q5KPE3/961-1030       OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KPE3/961-1030       DE Single-stranded DNA specific endodeoxyribonuclease, putative
#=GS Q5KPE3/961-1030       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A178B7F9/1032-1095  AC A0A178B7F9
#=GS A0A178B7F9/1032-1095  OS Stagonospora sp. SRC1lsM3a
#=GS A0A178B7F9/1032-1095  DE PIN domain-like protein
#=GS A0A178B7F9/1032-1095  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Massarineae; Massarinaceae; Stagonospora; Stagonospora sp. SRC1lsM3a; 
#=GS A0A371C798/900-959    AC A0A371C798
#=GS A0A371C798/900-959    OS Yarrowia lipolytica
#=GS A0A371C798/900-959    DE Uncharacterized protein
#=GS A0A371C798/900-959    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS Q754D7/787-848        AC Q754D7
#=GS Q754D7/787-848        OS Eremothecium gossypii ATCC 10895
#=GS Q754D7/787-848        DE AFR133Cp
#=GS Q754D7/787-848        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS R9XL00/794-855        AC R9XL00
#=GS R9XL00/794-855        OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XL00/794-855        DE AaceriAFR133Cp
#=GS R9XL00/794-855        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q0V4Z7/1003-1069      AC Q0V4Z7
#=GS Q0V4Z7/1003-1069      OS Parastagonospora nodorum SN15
#=GS Q0V4Z7/1003-1069      DE Uncharacterized protein
#=GS Q0V4Z7/1003-1069      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS A0A0F7S792/1053-1123  AC A0A0F7S792
#=GS A0A0F7S792/1053-1123  OS Sporisorium scitamineum
#=GS A0A0F7S792/1053-1123  DE Uncharacterized protein
#=GS A0A0F7S792/1053-1123  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS M9LQJ0/1134-1203      AC M9LQJ0
#=GS M9LQJ0/1134-1203      OS Moesziomyces antarcticus T-34
#=GS M9LQJ0/1134-1203      DE 5'-3' exonuclease
#=GS M9LQJ0/1134-1203      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS V5EIJ9/1022-1093      AC V5EIJ9
#=GS V5EIJ9/1022-1093      OS Kalmanozyma brasiliensis GHG001
#=GS V5EIJ9/1022-1093      DE Uncharacterized protein
#=GS V5EIJ9/1022-1093      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Kalmanozyma; Kalmanozyma brasiliensis; 
#=GS A0A077R681/1106-1176  AC A0A077R681
#=GS A0A077R681/1106-1176  OS Melanopsichium pennsylvanicum 4
#=GS A0A077R681/1106-1176  DE Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome
#=GS A0A077R681/1106-1176  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; 
#=GS B9WG42/809-871        AC B9WG42
#=GS B9WG42/809-871        OS Candida dubliniensis CD36
#=GS B9WG42/809-871        DE DNA-repair protein RAD2 orthologue, putative
#=GS B9WG42/809-871        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS J8PNE1/852-918        AC J8PNE1
#=GS J8PNE1/852-918        OS Saccharomyces arboricola H-6
#=GS J8PNE1/852-918        DE Rad2p
#=GS J8PNE1/852-918        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS A0A0L8VPR2/849-912    AC A0A0L8VPR2
#=GS A0A0L8VPR2/849-912    OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VPR2/849-912    DE RAD2p Single-stranded DNA endonuclease
#=GS A0A0L8VPR2/849-912    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS H0GGY8/849-912        AC H0GGY8
#=GS H0GGY8/849-912        OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GGY8/849-912        DE Rad2p
#=GS H0GGY8/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RJY1/849-912    AC A0A0L8RJY1
#=GS A0A0L8RJY1/849-912    OS Saccharomyces eubayanus
#=GS A0A0L8RJY1/849-912    DE RAD2-like protein
#=GS A0A0L8RJY1/849-912    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS E6ZMQ0/1085-1155      AC E6ZMQ0
#=GS E6ZMQ0/1085-1155      OS Sporisorium reilianum SRZ2
#=GS E6ZMQ0/1085-1155      DE Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome
#=GS E6ZMQ0/1085-1155      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS W3VTR4/1134-1203      AC W3VTR4
#=GS W3VTR4/1134-1203      OS Moesziomyces aphidis DSM 70725
#=GS W3VTR4/1134-1203      DE Uncharacterized protein
#=GS W3VTR4/1134-1203      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces aphidis; 
#=GS A0A3D8R4Q3/916-991    AC A0A3D8R4Q3
#=GS A0A3D8R4Q3/916-991    OS Aspergillus mulundensis
#=GS A0A3D8R4Q3/916-991    DE Single-stranded DNA endonuclease
#=GS A0A3D8R4Q3/916-991    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus mulundensis; 
#=GS Q6C8E7/900-959        AC Q6C8E7
#=GS Q6C8E7/900-959        OS Yarrowia lipolytica CLIB122
#=GS Q6C8E7/900-959        DE YALI0D20240p
#=GS Q6C8E7/900-959        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS A0A1D8NFF1/900-959    AC A0A1D8NFF1
#=GS A0A1D8NFF1/900-959    OS Yarrowia lipolytica
#=GS A0A1D8NFF1/900-959    DE Uncharacterized protein
#=GS A0A1D8NFF1/900-959    DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; 
#=GS C4YHA8/807-868        AC C4YHA8
#=GS C4YHA8/807-868        OS Candida albicans WO-1
#=GS C4YHA8/807-868        DE Uncharacterized protein
#=GS C4YHA8/807-868        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS N1P444/849-912        AC N1P444
#=GS N1P444/849-912        OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P444/849-912        DE Rad2p
#=GS N1P444/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WEY4/849-912        AC G2WEY4
#=GS G2WEY4/849-912        OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WEY4/849-912        DE K7_Rad2p
#=GS G2WEY4/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZUR7/849-912        AC A6ZUR7
#=GS A6ZUR7/849-912        OS Saccharomyces cerevisiae YJM789
#=GS A6ZUR7/849-912        DE Radiation sensitive protein
#=GS A6ZUR7/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GNH3/849-912        AC C7GNH3
#=GS C7GNH3/849-912        OS Saccharomyces cerevisiae JAY291
#=GS C7GNH3/849-912        DE Rad2p
#=GS C7GNH3/849-912        DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A081CNT1/1125-1195  AC A0A081CNT1
#=GS A0A081CNT1/1125-1195  OS Moesziomyces antarcticus
#=GS A0A081CNT1/1125-1195  DE Flap structure-specific endonuclease
#=GS A0A081CNT1/1125-1195  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS A0A127Z4B6/1094-1164  AC A0A127Z4B6
#=GS A0A127Z4B6/1094-1164  OS Sporisorium scitamineum
#=GS A0A127Z4B6/1094-1164  DE Related to RAD2-structure-specific nuclease of the nucleotide excision repairosome
#=GS A0A127Z4B6/1094-1164  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS Q560E0/1025-1094      AC Q560E0
#=GS Q560E0/1025-1094      OS Cryptococcus neoformans var. neoformans B-3501A
#=GS Q560E0/1025-1094      DE Uncharacterized protein
#=GS Q560E0/1025-1094      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GF SQ 33
P07276/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
A0A1D8PLU8/807-868            LTQHKLIELALLLGSDYTEGIKGIGPVQAMEILAEF-----GNLEKFKEWFDKHTKSVADKTELTKL--------------
Q5B2L4/886-961                LHRRKLISFAHLLGSDYTEGIPGIGPVTALEILTEF-----SSLEEFRDWWTQVQTGADMSNSSHAAFYKKFRKQATKIFL
A0A1U8QS55/886-961            LHRRKLISFAHLLGSDYTEGIPGIGPVTALEILTEF-----SSLEEFRDWWTQVQTGADMSNSSHAAFYKKFRKQATKIFL
A0A0D1DU59/1112-1181          LDREKLVQLAYYLGSDYTEGLVGVGPVVAMELLALF--PGQDGLLKFRDWWMRVQMGQDTEEHTRGKTMRRI---------
Q5KPE3/961-1030               LTRERLISLAYFLGSDYTLGLPGIGPVMGLEILANF--PGERGLYDFKEWWGRVQKGNDTEEESGTKWRKSF---------
A0A178B7F9/1032-1095          LTREKMIAIAQLLGSDYTTGIPGIGPVTALELLAEF-----PDLQDFKDWWSGVQNNTIPKDADKGSAF------------
A0A371C798/900-959            LERKDLVDLALLLGSDYTDGLPGIGPVSAMEILAEFKAPGKDTLREFKDWWESQLVERAN---------------------
Q754D7/787-848                LDRLKFIALAQLMGSDYTNGIKGIGPVSGIEILANY-----NTLEEFRTWYNEGQFRKSLLDKESLF--------------
R9XL00/794-855                LDRAKFIALAQLMGSDYTNGIKGIGPVSGVEILANY-----NTLEEFRTWYNEGQFRKSVLEKESPF--------------
Q0V4Z7/1003-1069              LTRDKMIAIAQLLGSDYTTGIPGIGPVTALELLAEF-----PDLQDFKDWWTGVQNNTIPKDADKNSAFRRR---------
A0A0F7S792/1053-1123          LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFRDWWMRVQMGQDTEEHTRGKTMRRIK--------
M9LQJ0/1134-1203              LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFREWWMRVQTGADTHEHTRGKTMRRI---------
V5EIJ9/1022-1093              LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--SGEDGLLKFRDWWMRVQTGKDTEEHTRGKTMRRIKK-------
A0A077R681/1106-1176          LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFRDWWQIVQMGKDTEEHTRGKTMRRIK--------
B9WG42/809-871                LTQHKLIELALLLGSDYTEGIKGIGPVQAMEILAEF-----GNLEKFKEWFDKHAKTVADKTELTKLQ-------------
J8PNE1/852-918                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GSLKNFKDWYNNGQFDKLKQETENKFEK-ELR--------
A0A0L8VPR2/849-912            LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
H0GGY8/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
A0A0L8RJY1/849-912            LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLENFKDWYNNGQFDKHKQETENKFEK------------
E6ZMQ0/1085-1155              LDREKLVRLAYYLGSDYTDGLAGVGPVVAMELLALF--PGEDGLLKFREWWLRVQMGQDTEEHTRGKTMRRIK--------
W3VTR4/1134-1203              LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFREWWMRVQTGADTHEHTRGKTMRRI---------
A0A3D8R4Q3/916-991            LHRRKLISFAHLLGSDYTEGIPGIGPVTALEILTEF-----GALEEFRDWWTQVQTGADMSNSSHAAFYKKFRKQATKIFL
Q6C8E7/900-959                LERKDLVDLALLLGSDYTDGLPGIGPVSAMEILAEFKAPGKDTLREFKDWWESQLVERAN---------------------
A0A1D8NFF1/900-959            LERKDLVDLALLLGSDYTDGLPGIGPVSAMEILAEFKAPGKDTLREFKDWWESQLVERAN---------------------
C4YHA8/807-868                LTQHKLIELALLLGSDYTEGIKGIGPVQAMEILAEF-----GNLEKFKEWFDKHTKSVADKTELTKL--------------
N1P444/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
G2WEY4/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
A6ZUR7/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
C7GNH3/849-912                LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF-----GNLKNFKDWYNNGQFDKRKQETENKFEK------------
A0A081CNT1/1125-1195          LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFREWWMRVQTGQDTHEHTRGKTMRRIK--------
A0A127Z4B6/1094-1164          LDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALF--PGEDGLLKFRDWWMRVQMGQDTEEHTRGKTMRRIK--------
Q560E0/1025-1094              LTRERLISLAYFLGSDYTLGLPGIGPVMGLEILANF--PGERGLYDFKEWWGRVQKGNDTEEESGTKWRKSF---------
#=GC scorecons                958456747946899999496496999466967848001114493597695344634433343333211111000000000
#=GC scorecons_70             *_*__**_**__******_**_*****___*_**_*_______*__****____*__________________________
#=GC scorecons_80             *_*___*_**__******_*__*_***___*__*_*_______*__*__*_______________________________
#=GC scorecons_90             *_*______*__******_*__*_***___*____*_______*__*__*_______________________________
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