# STOCKHOLM 1.0
#=GF ID 1.10.150.20/FF/000166
#=GF DE DNA-directed RNA polymerase subunit alpha
#=GF AC 1.10.150.20/FF/000166
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 46.065
#=GS Q3Z953/242-318      AC Q3Z953
#=GS Q3Z953/242-318      OS Dehalococcoides mccartyi 195
#=GS Q3Z953/242-318      DE DNA-directed RNA polymerase subunit alpha
#=GS Q3Z953/242-318      DR ORG; Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; Dehalococcoides mccartyi; 
#=GS Q3Z953/242-318      DR GO; GO:0003899; GO:0006351; 
#=GS Q3Z953/242-318      DR EC; 2.7.7.6; 
#=GS B8E1G0/241-308      AC B8E1G0
#=GS B8E1G0/241-308      OS Dictyoglomus turgidum DSM 6724
#=GS B8E1G0/241-308      DE DNA-directed RNA polymerase subunit alpha
#=GS B8E1G0/241-308      DR ORG; Bacteria; Dictyoglomi; Dictyoglomia; Dictyoglomales; Dictyoglomaceae; Dictyoglomus; Dictyoglomus turgidum; 
#=GS Q3ZZP6/242-319      AC Q3ZZP6
#=GS Q3ZZP6/242-319      OS Dehalococcoides mccartyi CBDB1
#=GS Q3ZZP6/242-319      DE DNA-directed RNA polymerase subunit alpha
#=GS Q3ZZP6/242-319      DR ORG; Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; Dehalococcoides mccartyi; 
#=GS Q3ZZP6/242-319      DR EC; 2.7.7.6; 
#=GS A0A142V9F0/242-319  AC A0A142V9F0
#=GS A0A142V9F0/242-319  OS Dehalococcoides mccartyi
#=GS A0A142V9F0/242-319  DE DNA-directed RNA polymerase subunit alpha
#=GS A0A142V9F0/242-319  DR ORG; Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; Dehalococcoides mccartyi; 
#=GS A0A142V9F0/242-319  DR EC; 2.7.7.6; 
#=GS A0A0V8M4N1/242-318  AC A0A0V8M4N1
#=GS A0A0V8M4N1/242-318  OS Dehalococcoides mccartyi
#=GS A0A0V8M4N1/242-318  DE DNA-directed RNA polymerase subunit alpha
#=GS A0A0V8M4N1/242-318  DR ORG; Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides; Dehalococcoides mccartyi; 
#=GS A0A0V8M4N1/242-318  DR EC; 2.7.7.6; 
#=GF SQ 5
Q3Z953/242-318              PEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRLKTIGLSLNPEEELFEDAE-
B8E1G0/241-308              EEEKKGLTLEDLGLSTRAYNSLRHAGIHTIEDLLSKSREDLMKIKNFGQKSLQELEEKLREKGLSLRD----------
Q3ZZP6/242-319              PEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRLKTIGLSLNPEDELFEEAEN
A0A142V9F0/242-319          PEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRLKTIGLSLNPEDELFEEAEN
A0A0V8M4N1/242-318          PEEKYNMPIEQLDLSVRAVNCLRHAGITTVGEVINRGTKELLTLRNFGLKSLTELEDRLKTIGLSLNPEEELFEDAE-
#=GC scorecons              399934655949599499395999999496565556545696456999399949996696439999432122221220
#=GC scorecons_70           _***_____*_*_**_**_*_******_**_*___*___**___****_***_*******__****____________
#=GC scorecons_80           _***_____*_*_**_**_*_******_*___________*____***_***_***__*___****____________
#=GC scorecons_90           _***_____*_*_**_**_*_******_*___________*____***_***_***__*___****____________
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