# STOCKHOLM 1.0
#=GF ID 1.10.1410.10/FF/000039
#=GF DE RNA polymerase II, putative
#=GF AC 1.10.1410.10/FF/000039
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 42.586
#=GS Q4QC09/187-370      AC Q4QC09
#=GS Q4QC09/187-370      OS Leishmania major
#=GS Q4QC09/187-370      DE Putative RNA polymerase II
#=GS Q4QC09/187-370      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4QC09/187-370      DR GO; GO:0004652; GO:0005739; GO:0006378; 
#=GS Q38CM2/157-364      AC Q38CM2
#=GS Q38CM2/157-364      OS Trypanosoma brucei brucei TREU927
#=GS Q38CM2/157-364      DE Uncharacterized protein
#=GS Q38CM2/157-364      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38CM2/157-364      DR GO; GO:0004652; GO:0005739; GO:0006378; 
#=GS A4HZI0/187-370      AC A4HZI0
#=GS A4HZI0/187-370      OS Leishmania infantum
#=GS A4HZI0/187-370      DE RNA polymerase II
#=GS A4HZI0/187-370      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9AVH0/187-370      AC E9AVH0
#=GS E9AVH0/187-370      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AVH0/187-370      DE Uncharacterized protein
#=GS E9AVH0/187-370      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS B3FB39/228-433      AC B3FB39
#=GS B3FB39/228-433      OS Trypanosoma brucei
#=GS B3FB39/228-433      DE Putative mitochondrial poly(A) polymerase 2
#=GS B3FB39/228-433      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS A0A3S7WWT5/187-370  AC A0A3S7WWT5
#=GS A0A3S7WWT5/187-370  OS Leishmania donovani
#=GS A0A3S7WWT5/187-370  DE RNA polymerase II, putative
#=GS A0A3S7WWT5/187-370  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9BFJ7/187-370      AC E9BFJ7
#=GS E9BFJ7/187-370      OS Leishmania donovani BPK282A1
#=GS E9BFJ7/187-370      DE Uncharacterized protein
#=GS E9BFJ7/187-370      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 7
Q4QC09/187-370              -----------------DPRLRLGVLGAKQWGREQQILNARRGWISPYALSIMYIHYMKETGRTALSFDEEAVSQRVNAIVSTAAESEGDISHVDE----LASILPLQEADMLLVEKDVFDFFAFYGTPGGFDFDASVVDIRSRERFSSKDQWCQLLDQLDERERWNLLGHEVILLRDPFEPHSLGRSVDFFRGEEIRERFRSAA---------
Q38CM2/157-364              SFDGPRNSLLLRLYMEGDPRLRCGVLCAKKWCRSQGILDARRGWISAYALTVMYIFYMQVTKRAVRIIDESEVNNILYCMSKQMLEG------VNECFPFVGDVCSCSDVDIQNVLSDLHGFFHFFGGSMCFDFDTDVVDIRKNDKLVSKESWLEGINHFDEKTRWNLLGYETIMIRDPYEDHNLGRSVDFFRGERIREVFRLASETKIEDVLN
A4HZI0/187-370              -----------------DPRLRLGVLGAKQWGREQQILNARRGWISPYALSIMYIHFMKDTGRTALSFDEEAVSQRVNAIVSTAAESEGDISHVDE----LASILPLQEADISLVEKDVLDFFAFYGTPGGFDFDASVVDIRSRERFSTKDQWCQFLDQLDEKERWHLLGHEVILLRDPFEPHSLGRSVDFFRGEEIREKFRSAA---------
E9AVH0/187-370              -----------------DPRLRLGVLGAKQWGREQQILNARRGWISPYALSIMYIHFMKDTGRTGLSFDEEAVSQRVNAIVSTAAESEGDISHVDE----LASILPLQEADISLVEKDVFDFFAFYGTPGGFDFDAFVVDIRSRERFSSKDQWCQFLGQLDEKERWHLLGHEVILLRDPFEPHSLGRSVDFFRGEELREKFRSAA---------
B3FB39/228-433              --DGPRNSLLLRLYMEGDPRLRCGVLCAKKWCRSQGILDARRGWISAYALTVMYIFYMQVTKRTARIIDESEVNNILYCMSKQMLEG------VNECFPFVGDVCSGSDVDIQNVLSDLHGFFHFFGGSMCFDFDTDVVDIRKNDKLVSKESWLEGINHFDEKTRWNLLGYETIMIRDPYEDHNLGRSVDFFRGERIREVFRLASETKIEDVLN
A0A3S7WWT5/187-370          -----------------DPRLRLGVLGAKQWGREQQILNARRGWISPYALSIMYIHFMKDTGRTALSFDEEAVSQRVNAIVSTAAEAEGDISHVDE----LASILPLQEADISLVEKDVLDFFAFYGTPGGFDFDASVVDIRSRERFSTKDQWCQFLDQLDEKERWHLLGHEVILLRDPFEPHSLGRSVDFFRGEEIREKFRSAA---------
E9BFJ7/187-370              -----------------DPRLRLGVLGAKQWGREQQILNARRGWISPYALSIMYIHFMKDTGRTALSFDEEAVSQRVNAIVSTAAEAEGDISHVDE----LASILPLQEADISLVEKDVLDFFAFYGTPGGFDFDASVVDIRSRERFSTKDQWCQFLDQLDEKERWHLLGHEVILLRDPFEPHSLGRSVDFFRGEEIREKFRSAA---------
#=GC scorecons              0011111111111111199999499959969595959969999999599956999579649596545599559554655655555942222229691111655645356598449359645994979554599996499999556665696594636566998599599969596699979495999999999995799399495111111111
#=GC scorecons_70           _________________*****_***_**_*_*_*_**_*******_***_****_**__*_**____**__*______*_____*_______*_*_______*____*_**__*__*___**_***____****__*****__**___**_*_____*_***_**_*****_**_*****_*_***********_***_**_*__________
#=GC scorecons_80           _________________*****_***_**_*_*_*_**_*******_***__***_**__*_*_____**__*____________*_______*_*______________**__*__*___**_***____****__*****_______*__*_______***_**_***_*_*__*****_*_***********_***_**_*__________
#=GC scorecons_90           _________________*****_***_**_*_*_*_**_*******_***__***__*__*_*_____**__*____________*_______*_*______________*___*__*___**_*_*____****__*****_______*__*_______***_**_***_*_*__***_*_*_***********__**_**_*__________
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