# STOCKHOLM 1.0
#=GF ID 1.10.132.30/FF/000007
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 1.10.132.30/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 18.049
#=GS P17545/675-789      AC P17545
#=GS P17545/675-789      OS Trypanosoma brucei brucei
#=GS P17545/675-789      DE DNA-directed RNA polymerase II subunit RPB1-B
#=GS P17545/675-789      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS P17545/675-789      DR EC; 2.7.7.6; 
#=GS Q584K3/674-788      AC Q584K3
#=GS Q584K3/674-788      OS Trypanosoma brucei brucei TREU927
#=GS Q584K3/674-788      DE DNA-directed RNA polymerase subunit
#=GS Q584K3/674-788      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q584K3/674-788      DR GO; GO:0005654; GO:0045291; 
#=GS Q4Q600/649-765      AC Q4Q600
#=GS Q4Q600/649-765      OS Leishmania major
#=GS Q4Q600/649-765      DE DNA-directed RNA polymerase subunit
#=GS Q4Q600/649-765      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q600/649-765      DR GO; GO:0005654; 
#=GS Q57YU2/674-788      AC Q57YU2
#=GS Q57YU2/674-788      OS Trypanosoma brucei brucei TREU927
#=GS Q57YU2/674-788      DE DNA-directed RNA polymerase subunit
#=GS Q57YU2/674-788      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q57YU2/674-788      DR GO; GO:0005634; 
#=GS A0A0A9YGP2/82-196   AC A0A0A9YGP2
#=GS A0A0A9YGP2/82-196   OS Lygus hesperus
#=GS A0A0A9YGP2/82-196   DE DNA-directed RNA polymerase II subunit RPB1-B
#=GS A0A0A9YGP2/82-196   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Cimicomorpha; Cimicoidea; Miridae; Mirinae; Mirini; Lygus; Lygus hesperus; 
#=GS A0A0N1J4B0/649-765  AC A0A0N1J4B0
#=GS A0A0N1J4B0/649-765  OS Leptomonas pyrrhocoris
#=GS A0A0N1J4B0/649-765  DE DNA-directed RNA polymerase subunit
#=GS A0A0N1J4B0/649-765  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS A0A1X0NJ78/665-779  AC A0A1X0NJ78
#=GS A0A1X0NJ78/665-779  OS Trypanosoma theileri
#=GS A0A1X0NJ78/665-779  DE DNA-directed RNA polymerase subunit
#=GS A0A1X0NJ78/665-779  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanosoma theileri; 
#=GS Q4DDX5/658-772      AC Q4DDX5
#=GS Q4DDX5/658-772      OS Trypanosoma cruzi strain CL Brener
#=GS Q4DDX5/658-772      DE DNA-directed RNA polymerase subunit
#=GS Q4DDX5/658-772      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS G0ULQ7/675-789      AC G0ULQ7
#=GS G0ULQ7/675-789      OS Trypanosoma congolense IL3000
#=GS G0ULQ7/675-789      DE DNA-directed RNA polymerase subunit
#=GS G0ULQ7/675-789      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Nannomonas; Trypanosoma congolense; 
#=GS G0TZQ4/670-785      AC G0TZQ4
#=GS G0TZQ4/670-785      OS Trypanosoma vivax Y486
#=GS G0TZQ4/670-785      DE DNA-directed RNA polymerase subunit
#=GS G0TZQ4/670-785      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella; Trypanosoma vivax; 
#=GS A0A061J0Q4/658-772  AC A0A061J0Q4
#=GS A0A061J0Q4/658-772  OS Trypanosoma rangeli SC58
#=GS A0A061J0Q4/658-772  DE DNA-directed RNA polymerase subunit
#=GS A0A061J0Q4/658-772  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Herpetosoma; Trypanosoma rangeli; 
#=GS A4HJP9/649-765      AC A4HJP9
#=GS A4HJP9/649-765      OS Leishmania braziliensis
#=GS A4HJP9/649-765      DE DNA-directed RNA polymerase subunit
#=GS A4HJP9/649-765      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A0N0P4K4/649-765  AC A0A0N0P4K4
#=GS A0A0N0P4K4/649-765  OS Leptomonas seymouri
#=GS A0A0N0P4K4/649-765  DE DNA-directed RNA polymerase subunit
#=GS A0A0N0P4K4/649-765  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas seymouri; 
#=GS A0A1G4I4P8/674-788  AC A0A1G4I4P8
#=GS A0A1G4I4P8/674-788  OS Trypanosoma equiperdum
#=GS A0A1G4I4P8/674-788  DE DNA-directed RNA polymerase subunit
#=GS A0A1G4I4P8/674-788  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS Q26791/674-788      AC Q26791
#=GS Q26791/674-788      OS Trypanosoma brucei
#=GS Q26791/674-788      DE DNA-directed RNA polymerase subunit
#=GS Q26791/674-788      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS Q26791/674-788      DR GO; GO:0005654; GO:0045291; 
#=GS A4I766/649-765      AC A4I766
#=GS A4I766/649-765      OS Leishmania infantum
#=GS A4I766/649-765      DE DNA-directed RNA polymerase subunit
#=GS A4I766/649-765      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A0A088SG91/649-765  AC A0A088SG91
#=GS A0A088SG91/649-765  OS Leishmania panamensis
#=GS A0A088SG91/649-765  DE DNA-directed RNA polymerase subunit
#=GS A0A088SG91/649-765  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS E9B260/649-765      AC E9B260
#=GS E9B260/649-765      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9B260/649-765      DE DNA-directed RNA polymerase subunit
#=GS E9B260/649-765      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS C9ZMF2/674-788      AC C9ZMF2
#=GS C9ZMF2/674-788      OS Trypanosoma brucei gambiense DAL972
#=GS C9ZMF2/674-788      DE DNA-directed RNA polymerase subunit
#=GS C9ZMF2/674-788      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A0A3L6L8J1/674-788  AC A0A3L6L8J1
#=GS A0A3L6L8J1/674-788  OS Trypanosoma brucei equiperdum
#=GS A0A3L6L8J1/674-788  DE DNA-directed RNA polymerase subunit
#=GS A0A3L6L8J1/674-788  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei equiperdum; 
#=GS K2NKG9/658-772      AC K2NKG9
#=GS K2NKG9/658-772      OS Trypanosoma cruzi marinkellei
#=GS K2NKG9/658-772      DE DNA-directed RNA polymerase subunit
#=GS K2NKG9/658-772      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; Trypanosoma cruzi marinkellei; 
#=GS E9BN38/649-765      AC E9BN38
#=GS E9BN38/649-765      OS Leishmania donovani BPK282A1
#=GS E9BN38/649-765      DE DNA-directed RNA polymerase subunit
#=GS E9BN38/649-765      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS P17546/675-789      AC P17546
#=GS P17546/675-789      OS Trypanosoma brucei brucei
#=GS P17546/675-789      DE DNA-directed RNA polymerase II subunit RPB1-A
#=GS P17546/675-789      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS P17546/675-789      DR EC; 2.7.7.6; 
#=GS Q25312/647-766      AC Q25312
#=GS Q25312/647-766      OS Leishmania major
#=GS Q25312/647-766      DE DNA-directed RNA polymerase subunit
#=GS Q25312/647-766      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS V5B7G2/628-742      AC V5B7G2
#=GS V5B7G2/628-742      OS Trypanosoma cruzi Dm28c
#=GS V5B7G2/628-742      DE DNA-directed RNA polymerase subunit
#=GS V5B7G2/628-742      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS Q8ISB0/658-772      AC Q8ISB0
#=GS Q8ISB0/658-772      OS Trypanosoma cruzi
#=GS Q8ISB0/658-772      DE DNA-directed RNA polymerase subunit
#=GS Q8ISB0/658-772      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS G0UT20/149-263      AC G0UT20
#=GS G0UT20/149-263      OS Trypanosoma congolense IL3000
#=GS G0UT20/149-263      DE Uncharacterized protein TCIL3000_8_7630
#=GS G0UT20/149-263      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Nannomonas; Trypanosoma congolense; 
#=GF SQ 27
P17545/675-789              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q584K3/674-788              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q4Q600/649-765              ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q57YU2/674-788              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A0A9YGP2/82-196           -----DADTLRQMNDVLIKTRDTVEKIGAAANNRTLSRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A0N1J4B0/649-765          ---VADASTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A1X0NJ78/665-779          -----DADTLRQMNEVLVKTRESVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q4DDX5/658-772              -----DADTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
G0ULQ7/675-789              -----DTDTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
G0TZQ4/670-785              ----ADAGTLRQMNEVLVRTRESVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A061J0Q4/658-772          -----DSDTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A4HJP9/649-765              ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A0N0P4K4/649-765          ---VADASTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A1G4I4P8/674-788          -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q26791/674-788              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A4I766/649-765              ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A088SG91/649-765          ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
E9B260/649-765              ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
C9ZMF2/674-788              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
A0A3L6L8J1/674-788          -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
K2NKG9/658-772              -----DADTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
E9BN38/649-765              ---VADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
P17546/675-789              -----DSDTLRQMNDVLVKTRRNVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q25312/647-766              QDTVADATTLKEMNNVLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
V5B7G2/628-742              -----DADTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
Q8ISB0/658-772              -----DADTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
G0UT20/149-263              -----DTDTLRQMNEVLVKTRENVEKIGAAANNRTLNRKAGMTLLQSFEADVNSALNKCREEAAKKALSNVRRTNSFKVMIEAGSKGTDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPH
#=GC scorecons              000119659976995994899569999999999559699999699999999999999999999999999999999999999999999699999999999999999999999999999999
#=GC scorecons_70           _____**_******_**_***__**********__*_*****_********************************************_********************************
#=GC scorecons_80           _____*__**__**_**_***__**********__*_*****_********************************************_********************************
#=GC scorecons_90           _____*__**__**_**_***__**********__*_*****_********************************************_********************************
//