# STOCKHOLM 1.0 #=GF ID 1.10.132.30/FF/000006 #=GF DE DNA-directed RNA polymerase subunit #=GF AC 1.10.132.30/FF/000006 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 75.977 #=GS Q9SVY0/846-981 AC Q9SVY0 #=GS Q9SVY0/846-981 OS Arabidopsis thaliana #=GS Q9SVY0/846-981 DE DNA-directed RNA polymerase I subunit 1 #=GS Q9SVY0/846-981 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9SVY0/846-981 DR GO; GO:0005634; GO:0009506; #=GS Q9SVY0/846-981 DR EC; 2.7.7.6; #=GS Q86H36/802-930 AC Q86H36 #=GS Q86H36/802-930 OS Dictyostelium discoideum #=GS Q86H36/802-930 DE DNA-directed RNA polymerase I subunit rpa1 #=GS Q86H36/802-930 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q86H36/802-930 DR GO; GO:0003899; GO:0005736; GO:0006360; #=GS Q86H36/802-930 DR EC; 2.7.7.6; #=GS A0A1I9LME9/833-968 AC A0A1I9LME9 #=GS A0A1I9LME9/833-968 OS Arabidopsis thaliana #=GS A0A1I9LME9/833-968 DE DNA-directed RNA polymerase subunit #=GS A0A1I9LME9/833-968 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A5BD07/1003-1111 AC A5BD07 #=GS A5BD07/1003-1111 OS Vitis vinifera #=GS A5BD07/1003-1111 DE Uncharacterized protein #=GS A5BD07/1003-1111 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS F6HL45/888-996 AC F6HL45 #=GS F6HL45/888-996 OS Vitis vinifera #=GS F6HL45/888-996 DE DNA-directed RNA polymerase subunit #=GS F6HL45/888-996 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS F1A380/807-919 AC F1A380 #=GS F1A380/807-919 OS Dictyostelium purpureum #=GS F1A380/807-919 DE DNA-directed RNA polymerase subunit #=GS F1A380/807-919 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS A0A1D6K250/886-994 AC A0A1D6K250 #=GS A0A1D6K250/886-994 OS Zea mays #=GS A0A1D6K250/886-994 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K250/886-994 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS I1L9X1/853-957 AC I1L9X1 #=GS I1L9X1/853-957 OS Glycine max #=GS I1L9X1/853-957 DE DNA-directed RNA polymerase subunit #=GS I1L9X1/853-957 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS M4CGG1/786-920 AC M4CGG1 #=GS M4CGG1/786-920 OS Brassica rapa subsp. pekinensis #=GS M4CGG1/786-920 DE DNA-directed RNA polymerase subunit #=GS M4CGG1/786-920 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A087GYQ9/822-958 AC A0A087GYQ9 #=GS A0A087GYQ9/822-958 OS Arabis alpina #=GS A0A087GYQ9/822-958 DE DNA-directed RNA polymerase subunit #=GS A0A087GYQ9/822-958 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS A0A1J3K952/813-949 AC A0A1J3K952 #=GS A0A1J3K952/813-949 OS Noccaea caerulescens #=GS A0A1J3K952/813-949 DE DNA-directed RNA polymerase subunit #=GS A0A1J3K952/813-949 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS R0FMZ6/834-969 AC R0FMZ6 #=GS R0FMZ6/834-969 OS Capsella rubella #=GS R0FMZ6/834-969 DE DNA-directed RNA polymerase subunit #=GS R0FMZ6/834-969 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS D7LVV3/848-983 AC D7LVV3 #=GS D7LVV3/848-983 OS Arabidopsis lyrata subsp. lyrata #=GS D7LVV3/848-983 DE DNA-directed RNA polymerase subunit #=GS D7LVV3/848-983 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A0D3CUE1/15-149 AC A0A0D3CUE1 #=GS A0A0D3CUE1/15-149 OS Brassica oleracea var. oleracea #=GS A0A0D3CUE1/15-149 DE Uncharacterized protein #=GS A0A0D3CUE1/15-149 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A078JFI7/265-399 AC A0A078JFI7 #=GS A0A078JFI7/265-399 OS Brassica napus #=GS A0A078JFI7/265-399 DE BnaAnng20540D protein #=GS A0A078JFI7/265-399 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0B2QR88/495-599 AC A0A0B2QR88 #=GS A0A0B2QR88/495-599 OS Glycine soja #=GS A0A0B2QR88/495-599 DE DNA-directed RNA polymerase I subunit rpa1 #=GS A0A0B2QR88/495-599 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A1D6K244/886-994 AC A0A1D6K244 #=GS A0A1D6K244/886-994 OS Zea mays #=GS A0A1D6K244/886-994 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K244/886-994 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K251/886-994 AC A0A1D6K251 #=GS A0A1D6K251/886-994 OS Zea mays #=GS A0A1D6K251/886-994 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K251/886-994 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K243/886-994 AC A0A1D6K243 #=GS A0A1D6K243/886-994 OS Zea mays #=GS A0A1D6K243/886-994 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K243/886-994 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K232/886-994 AC A0A1D6K232 #=GS A0A1D6K232/886-994 OS Zea mays #=GS A0A1D6K232/886-994 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K232/886-994 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K240/791-899 AC A0A1D6K240 #=GS A0A1D6K240/791-899 OS Zea mays #=GS A0A1D6K240/791-899 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K240/791-899 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K228/697-805 AC A0A1D6K228 #=GS A0A1D6K228/697-805 OS Zea mays #=GS A0A1D6K228/697-805 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K228/697-805 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K225/843-951 AC A0A1D6K225 #=GS A0A1D6K225/843-951 OS Zea mays #=GS A0A1D6K225/843-951 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K225/843-951 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K226/838-946 AC A0A1D6K226 #=GS A0A1D6K226/838-946 OS Zea mays #=GS A0A1D6K226/838-946 DE DNA-directed RNA polymerase subunit #=GS A0A1D6K226/838-946 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K238/46-155 AC A0A1D6K238 #=GS A0A1D6K238/46-155 OS Zea mays #=GS A0A1D6K238/46-155 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K238/46-155 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K227/321-430 AC A0A1D6K227 #=GS A0A1D6K227/321-430 OS Zea mays #=GS A0A1D6K227/321-430 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K227/321-430 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K233/288-397 AC A0A1D6K233 #=GS A0A1D6K233/288-397 OS Zea mays #=GS A0A1D6K233/288-397 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K233/288-397 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K231/321-430 AC A0A1D6K231 #=GS A0A1D6K231/321-430 OS Zea mays #=GS A0A1D6K231/321-430 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K231/321-430 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K245/321-430 AC A0A1D6K245 #=GS A0A1D6K245/321-430 OS Zea mays #=GS A0A1D6K245/321-430 DE DNA-directed RNA polymerase I subunit 1 #=GS A0A1D6K245/321-430 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS M4CT03/816-950 AC M4CT03 #=GS M4CT03/816-950 OS Brassica rapa subsp. pekinensis #=GS M4CT03/816-950 DE DNA-directed RNA polymerase subunit #=GS M4CT03/816-950 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GF SQ 30 Q9SVY0/846-981 -LKDMDEE-RTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC Q86H36/802-930 --KNKEEKFRVETLKKANEEGYTVAAKF---ADLSKYDEQKARDFFSKALQS--EREVARLDGLLKKGLNQYTSK-VIDTLIPGGQQKPFPKNNFSLMTVSGAKGSVVNFSQVSCLLGQQELEGKRVPRMVSGKTLP- A0A1I9LME9/833-968 -LKDMDEE-RTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNYLNQCSSKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A5BD07/1003-1111 --------------------------KFIG-SNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSK-VNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLP- F6HL45/888-996 --------------------------KFIG-SNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSK-VNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLP- F1A380/807-919 ------------------DEGYNVAAKF---GNASEYNAKESREFFGKALQS--EREVARLDGMLKKALNTYTSK-IIDTLIPGGQQKPFPKNNFSLMTVSGAKGSVVNFSQVSCLLGQQELEGKRVPRMVSGKTLP- A0A1D6K250/886-994 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- I1L9X1/853-957 -------------------------------KNSDNIDPVTLQLNIEKKIRSNGEAAL-TLDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLP- M4CGG1/786-920 --KDVDEE-RTKQLQECEGVGEKVLRKTFGIDVNAQIDPQDMKSSIERILYEDGEPALASLDRRIVSELNKCSGKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A0A087GYQ9/822-958 ILKDMDEE-RAKQLQECEQAGEKVMRKTFGIDVDAQIDPQDMKSRIERILYEDGEAALASLDRSVVNELNQCSGKGVMNDLLSDGLLKTPGTNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A0A1J3K952/813-949 ILKDMDEK-RTNQLQECEKVGEKVLRKTFGIDVDGQIDPQDMKSRIERILYEDGEPALLSLDRSIVSELNQCSGKGVMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC R0FMZ6/834-969 -LKDMDEE-RTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRSRIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC D7LVV3/848-983 -LKDMDEE-RTKQLQECENVGERVLRKTFGIDVDVQIDPQDMRSRIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGMNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A0A0D3CUE1/15-149 --KDVDEE-RTKQLQECEGVGEKVLRKTFGIDVNAQIDPQDMKSSIERILYEDGEPALASLDRRIVSELNQCSGKGVMNDLLSDGLLKTPGRNCISLMTISGAKGIKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A0A078JFI7/265-399 --KDVDEE-RTKQLQECEGVGEKVLRKTFGIDVNAQIDPQDMKSSIERLLYEDGEPALASLDRRIVSELNQCSGKGVMNDLLSDGLLKTPGRNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC A0A0B2QR88/495-599 -------------------------------KNSDNIDPVTLQLNIEKKIRSNGEAAL-TLDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLP- A0A1D6K244/886-994 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K251/886-994 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K243/886-994 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K232/886-994 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K240/791-899 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K228/697-805 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K225/843-951 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K226/838-946 ---------------------------FTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K238/46-155 --------------------------KFTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K227/321-430 --------------------------KFTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K233/288-397 --------------------------KFTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K231/321-430 --------------------------KFTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- A0A1D6K245/321-430 --------------------------KFTGADEDHKGDLVKLHMEVEKAVRSNGESDTATLDNDMKNALNGITTD-VNKILFPDGLQKPFPGNCLSLMTTTGAKGGPVNMNQISSLLGQQELEGKRVPRMVSGKTLP- M4CT03/816-950 --KDVDEK-RTEQLRECEGVGEKVLRKTFGVDVNAQIDPQDMKSRIERVLYEDGELALASLDRSVVSELNQCSGKGVMNDLLSDGLLKTPGTNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPC #=GC scorecons 001101110111111111011111114436364535485456544677564557945565995364649944655184549656974964549759999569999649965989859999799999999999999991 #=GC scorecons_70 _______________________________*_____*_______***_____**___*_**______**__*___*___*__***_**___**_****__****__**__****_*********************_ #=GC scorecons_80 _____________________________________*________**_____**_____**______**______*___*___*__*____**_****__****__**__****_****_****************_ #=GC scorecons_90 _____________________________________*________________*_____**______**______*___*___*__*____*__****__****__**__***__****_****************_ //