# STOCKHOLM 1.0
#=GF ID 1.10.1240.30/FF/000003
#=GF DE Circadian clock protein KaiA
#=GF AC 1.10.1240.30/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 49.684
#=GS 4g86B02/168-284 AC Q79PF6
#=GS 4g86B02/168-284 OS Synechococcus elongatus PCC 7942
#=GS 4g86B02/168-284 DE Circadian clock protein KaiA
#=GS 4g86B02/168-284 DR CATH; 4g86; B:168-282; 
#=GS 4g86B02/168-284 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus elongatus; 
#=GS 4g86B02/168-284 DR GO; GO:0005515; GO:0009649; GO:0035308; GO:0042753; GO:0042802; 
#=GS Q79V62/167-283  AC Q79V62
#=GS Q79V62/167-283  OS Thermosynechococcus elongatus BP-1
#=GS Q79V62/167-283  DE Circadian clock protein KaiA
#=GS Q79V62/167-283  DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Thermosynechococcus; Thermosynechococcus elongatus; 
#=GS Q79V62/167-283  DR GO; GO:0005515; GO:0007623; GO:0042802; 
#=GS P74644/173-289  AC P74644
#=GS P74644/173-289  OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS P74644/173-289  DE Circadian clock protein KaiA
#=GS P74644/173-289  DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS P74644/173-289  DR GO; GO:0007623; 
#=GS Q6L8K1/167-283  AC Q6L8K1
#=GS Q6L8K1/167-283  OS Thermosynechococcus vulcanus
#=GS Q6L8K1/167-283  DE Circadian clock protein KaiA
#=GS Q6L8K1/167-283  DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Thermosynechococcus; Thermosynechococcus vulcanus; 
#=GS Q6L8K1/167-283  DR GO; GO:0005515; 
#=GS 4g86A02/168-284 AC Q79PF6
#=GS 4g86A02/168-284 OS Synechococcus elongatus PCC 7942
#=GS 4g86A02/168-284 DE Circadian clock protein KaiA
#=GS 4g86A02/168-284 DR CATH; 4g86; A:168-282; 
#=GS 4g86A02/168-284 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus elongatus; 
#=GS 4g86A02/168-284 DR GO; GO:0005515; GO:0009649; GO:0035308; GO:0042753; GO:0042802; 
#=GS 1r8jB02/173-289 AC Q79PF6
#=GS 1r8jB02/173-289 OS Synechococcus elongatus PCC 7942
#=GS 1r8jB02/173-289 DE Circadian clock protein KaiA
#=GS 1r8jB02/173-289 DR CATH; 1r8j; B:168-282; 
#=GS 1r8jB02/173-289 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus elongatus; 
#=GS 1r8jB02/173-289 DR GO; GO:0005515; GO:0009649; GO:0035308; GO:0042753; GO:0042802; 
#=GS 1r8jA02/173-289 AC Q79PF6
#=GS 1r8jA02/173-289 OS Synechococcus elongatus PCC 7942
#=GS 1r8jA02/173-289 DE Circadian clock protein KaiA
#=GS 1r8jA02/173-289 DR CATH; 1r8j; A:168-282; 
#=GS 1r8jA02/173-289 DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus elongatus; 
#=GS 1r8jA02/173-289 DR GO; GO:0005515; GO:0009649; GO:0035308; GO:0042753; GO:0042802; 
#=GS L8APA7/173-289  AC L8APA7
#=GS L8APA7/173-289  OS Bacillus subtilis BEST7613
#=GS L8APA7/173-289  DE Circadian rhythm protein
#=GS L8APA7/173-289  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS Q79PF6/168-284  AC Q79PF6
#=GS Q79PF6/168-284  OS Synechococcus elongatus PCC 7942
#=GS Q79PF6/168-284  DE Circadian clock protein KaiA
#=GS Q79PF6/168-284  DR ORG; Bacteria; Cyanobacteria; Synechococcales; Synechococcaceae; Synechococcus; Synechococcus elongatus; 
#=GS Q79PF6/168-284  DR GO; GO:0005515; GO:0009649; GO:0035308; GO:0042753; GO:0042802; 
#=GF SQ 9
4g86B02/168-284         GVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET
Q79V62/167-283          GVYYKRDTAFFFRRMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELMDTFSKQLKLEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPREV
P74644/173-289          GVYYKRKPSHFYRNFSPQEKQEYLEDLSSQYREIILSYFSDEGTVNDLLDQFVNQAFFADLAISQILEIHMELMDEFSQHLKLEGRSEEVLLDYRLVLIDILAHLGEMYRRSIPRED
Q6L8K1/167-283          GVYYKRDTAFFFRRMSPADKRKLLDELRSIYRTIVLEYFNTDAKVNERIDEFVSKAFFADISVSQVLEIHVELMDTFSKQLKLEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPREV
4g86A02/168-284         GVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET
1r8jB02/173-289         GVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET
1r8jA02/173-289         GVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET
L8APA7/173-289          GVYYKRKPSHFYRNFSPQEKQEYLEDLSSQYREIILSYFSDEGTVNDLLDQFVNQAFFADLAISQILEIHMELMDEFSQHLKLEGRSEEVLLDYRLVLIDILAHLGEMYRRSIPRED
Q79PF6/168-284          GVYYKRDPDRFLRNLPAYESQKLHQAMQTSYREIVLSYFSPNSNLNQSIDNFVNMAFFADVPVTKVVEIHMELMDEFAKKLRVEGRSEDILLDYRLTLIDVIAHLCEMYRRSIPRET
#=GC scorecons          999999664495965663756655546463995979599645446953694996499999547667699969999596659769999977999999699976999599999999994
#=GC scorecons_70       ******_*__*_*_____*_**____*___**_***_***____**__**_***_*****__*_***********_*_*_****************_********_**********_
#=GC scorecons_80       ******____*_*_____*___________**_***_**______*___*_**__*****__*__*_***_****_*___*__*************_****_***_**********_
#=GC scorecons_90       ******____*_*_________________**_*_*_**______*___*_**__*****_______***_****_*___*__*****__******_***__***_**********_
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