# STOCKHOLM 1.0
#=GF ID 1.10.1070.11/FF/000041
#=GF DE DNA-dependent protein kinase catalytic subunit
#=GF AC 1.10.1070.11/FF/000041
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.418
#=GS Q54UC0/4036-4220      AC Q54UC0
#=GS Q54UC0/4036-4220      OS Dictyostelium discoideum
#=GS Q54UC0/4036-4220      DE DNA-dependent protein kinase catalytic subunit
#=GS Q54UC0/4036-4220      DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54UC0/4036-4220      DR GO; GO:0004672; GO:0005958; GO:0006303; GO:0006468; GO:0006974; GO:0006975; GO:0072718; 
#=GS Q54UC0/4036-4220      DR EC; 2.7.11.1; 
#=GS A0A2K1K3A5/3836-4011  AC A0A2K1K3A5
#=GS A0A2K1K3A5/3836-4011  OS Physcomitrella patens
#=GS A0A2K1K3A5/3836-4011  DE Uncharacterized protein
#=GS A0A2K1K3A5/3836-4011  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9SH90/3903-4078      AC A9SH90
#=GS A9SH90/3903-4078      OS Physcomitrella patens
#=GS A9SH90/3903-4078      DE Predicted protein
#=GS A9SH90/3903-4078      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS D6WBH3/3558-3738      AC D6WBH3
#=GS D6WBH3/3558-3738      OS Tribolium castaneum
#=GS D6WBH3/3558-3738      DE DNA-dependent protein kinase catalytic subunit-like Protein
#=GS D6WBH3/3558-3738      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS A7SPT8/1598-1782      AC A7SPT8
#=GS A7SPT8/1598-1782      OS Nematostella vectensis
#=GS A7SPT8/1598-1782      DE Predicted protein
#=GS A7SPT8/1598-1782      DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS B3RQ94/3786-3966      AC B3RQ94
#=GS B3RQ94/3786-3966      OS Trichoplax adhaerens
#=GS B3RQ94/3786-3966      DE Uncharacterized protein
#=GS B3RQ94/3786-3966      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS H3HAZ4/211-398        AC H3HAZ4
#=GS H3HAZ4/211-398        OS Phytophthora ramorum
#=GS H3HAZ4/211-398        DE Uncharacterized protein
#=GS H3HAZ4/211-398        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A9VDE0/3469-3654      AC A9VDE0
#=GS A9VDE0/3469-3654      OS Monosiga brevicollis
#=GS A9VDE0/3469-3654      DE Predicted protein
#=GS A9VDE0/3469-3654      DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS A0A177WTX6/3373-3542  AC A0A177WTX6
#=GS A0A177WTX6/3373-3542  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177WTX6/3373-3542  DE Uncharacterized protein
#=GS A0A177WTX6/3373-3542  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS H2Y3C6/280-462        AC H2Y3C6
#=GS H2Y3C6/280-462        OS Ciona intestinalis
#=GS H2Y3C6/280-462        DE Uncharacterized protein
#=GS H2Y3C6/280-462        DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A369SFT7/3871-4051  AC A0A369SFT7
#=GS A0A369SFT7/3871-4051  OS Trichoplax sp. H2
#=GS A0A369SFT7/3871-4051  DE DNA-dependent protein kinase catalytic subunit
#=GS A0A369SFT7/3871-4051  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS F4PB28/3612-3781      AC F4PB28
#=GS F4PB28/3612-3781      OS Batrachochytrium dendrobatidis JAM81
#=GS F4PB28/3612-3781      DE Uncharacterized protein
#=GS F4PB28/3612-3781      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A1W5B7T9/2023-2203  AC A0A1W5B7T9
#=GS A0A1W5B7T9/2023-2203  OS Ciona intestinalis
#=GS A0A1W5B7T9/2023-2203  DE DNA-dependent protein kinase catalytic subunit isoform X1
#=GS A0A1W5B7T9/2023-2203  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 13
Q54UC0/4036-4220              TRDDCAKKLEKQHSKVPENLLQNGIWSLSSSPESYL--FIRNSFARSLASFSVCSYVIGIGDRHLENFLISQRDGRLIGIDFGHAFGTATQFLPIPELMPFRLTRQFTSFLRPLDS-VGLLNHNMTYTLTALQNQKEILLTTMDVFVKEPLLDWSKLATRLVKEQGKHPKD---------TKNVWFPKQKIQIAKKK-------------
A0A2K1K3A5/3836-4011          ------------------DTLRMGFSRLVTSAESYL--ALRSQFARSLSVTSICGYVAGVGDRHLGNTLVDMRTGALVPIDFGYSFGTNVLLLPVPELVPFRLTAQLKNFLLPLTA-VGLLRSDMVRIMTALRGSRGLISAVMEVFVKEPLVDWRQEAVKLQRARARDVSKSTALEADAGANHHMAAFSEEEHVQLK-------------
A9SH90/3903-4078              ------------------DTLRMGFSRLVTSAESYL--ALRSQFARSLSVTSICGYVAGVGDRHLGNTLVDMRTGALVPIDFGYSFGTNVLLLPVPELVPFRLTAQLKNFLLPLTA-VGLLRSDMVRIMTALRGSRGLISAVMEVFVKEPLVDWRQEAVKLQRARARDVSKSTALEADAGANHHMAAFSEEEHVQLK-------------
D6WBH3/3558-3738              ---KTIVKFKTLVSKISWDVFRSTFLKLSSNTEGFF--ALRNNFIKSYAIMCASHWIVGVGDRHLSNSLVCLNSGKVLGIDFGHAFGTATQILPVPELVPFRLTPHIVNLMEPLGA-TGLFREIMVHCLRSLRSNSASLLSTMNVFIEEPSLDWLEHASRF--------STGV----DT-SNCDWYPAQKIEQARKKLAG----------
A7SPT8/1598-1782              --TDTESEFKKKQAQVPWDLLRRAFQQLAASPEAYL--TLRTHFARTHACICICQYVLGIGDRHLSNFLVDMRTGGLIGIDFGHSFGSATQFLPVPELVPFRLTRQFTNLLLPLKE-SGLVRNTMIHVMRALRGNHELLLNTMDVFVKEPSLDWQMFARKQAEDQHMEIGMYY-------EDLTWYPREKVLTAQRK-------------
B3RQ94/3786-3966              --SEVENHFKFRENSVPWDLLRRGFVALSASSEAYL--MLRSHFARTHATVSICHYLLGIGDRHLSNFMIDRLTGGMIGIDFGHAFGSATQFLPLPELMPFRLTRQMLNLMLPLRE-NGQLKCSMVHTLRALRNKPDLLVNTMDVFIKEPSLDWQNFANRQNAKQGLKTES---------DDFSWYPREKVTFAK---------------
H3HAZ4/211-398                --ASFSAKFSKVQAMIPADLLRRQLLGLGSNFEAFL--LVRDHFLKSLAVFSACSYVLGIGDRHLDNFLFELSSGRVIGIDFGVSFGAGASVLPVPELIPFRYTRQMDFVFQPYDG-ANLLAQEMQAVFEALRSKRQVVESVMNVFLHEPLLDWQQSTTTHQKALFKGAEG---------DDRSTLQDSDVEMEEVEEPARA--------
A9VDE0/3469-3654              ------------HSSVADNITRVLVKGTRSDVKLAFEKAQSMHYGRTLSTINICQYILGIGDRHLSNVMVDLRTGGLIGIDFGHHFGSATYLLPIPELMPFRLTRIMEQALQPHTR-NGLIKHVMCHVLTALKARRSDLLAVIQIFATEPTLDWQQNAKKVIKQEEGE-----------ELQVENYATRNLERLRLKLSGCHPAAIMAEE
A0A177WTX6/3373-3542          -------------MIMEKPFLKLFIQNLAASAEAYI--LIRSGFAKSWASLSIASYIMGIGDRHTENFLVDLKSGHVIGIDFGYAFGSATEVLPVPELVPFRLTRQIKEFMGPLGI-HVLLEPPMVDVMTVLQEKKDMIMTSLDIFVKEPLMEWRKFAISQYKRNINRFGALT----ES-SDIDTNSLNTP-------------------
H2Y3C6/280-462                ------EKFKRAENMLPWDLFRQAYIRLCANPESFV--ALRKRFTSSYAVMCVTHWLLGIGDRHTSNFMLSLTTGEVVGIDFGHAFGSATEVLPVPELVPFRLTNQIINLLSPHSAIHGELRHVMVRCLSALRSRTDTILPLLDVFVKDPSVDWAKFGKRSRDQDQRYSDSDV----ES-SDRVWYARRKMALTKK--------------
A0A369SFT7/3871-4051          --SEVENHFKFRENSVPWDLLRRGFVALSASSEAYL--MLRSHFARTHATVSICHYLLGIGDRHLSNFMIDRLTGGMIGIDFGHAFGSATQFLPLPELMPFRLTRQMLNLMLPLRE-NGQLKCSMVHTLRALRNKPDLLVNTMDVFIKEPSLDWQNFANRQNAKQGLKTES---------DDFSWYPREKVTFAK---------------
F4PB28/3612-3781              -------------MIMEKPFLKLFIQNLAASAEAYI--LIRSGFAKSWASLSIASYIMGIGDRHTENFLVDLKSGHVIGIDFGYAFGSATEVLPVPELVPFRLTRQIKEFMGPLGI-HVLLEPPMVDVMTVLQEKKDMIMTSLDIFVKEPLMEWRKFAISQYKRNINRFGALT----ES-SDIDTNSLNTP-------------------
A0A1W5B7T9/2023-2203          -------KFKRAENMLPWDLFRQAYIRLCANPESFV--ALRKRFTSSYAVMCVTHWLLGIGDRHTSNFMLSLTTGEVVGIDFGHAFGSATEVLPVPELVPFRLTNQIINLLSPHSAIHGELRHVMVRCLSALRSRTDTILPLLDVFVKDPSVDWAKFGKRSRDQDQRYSDSDV----ES-SDRVWYARRKMALTK---------------
#=GC scorecons                000000012211122332546733423735548465004574485563644565465597999964956555359356799996599566359969996999795653456395330365643395446469644443644465796689467944363532333222232010000110352334423432233120000000000000
#=GC scorecons_70             _____________________*_____*____*_*_____*__*__*_*______*__******__*_*_____*__******__**_**__************_*______*_______*___*_____***_________*_**__**__**___*____________________________________________________
#=GC scorecons_80             _____________________*_____*____*_______*__*______________******__*_______*____****__**_____**_***_*****________*___________*______*____________**__**__**________________________________________________________
#=GC scorecons_90             ___________________________________________*______________*_****__*_______*____****__**_____**_***_***_*________*___________*______*_____________*___*___*________________________________________________________
//