# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000831
#=GF DE Homeobox protein NANOG
#=GF AC 1.10.10.60/FF/000831
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 52.135
#=GS A5JNG8/191-259  AC A5JNG8
#=GS A5JNG8/191-259  OS Danio rerio
#=GS A5JNG8/191-259  DE Nanog
#=GS A5JNG8/191-259  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A5JNG8/191-259  DR GO; GO:0001706; GO:0006355; GO:0007369; GO:0010468; GO:0030036; GO:0042803; GO:0043565; GO:0043622; GO:0060968; GO:0090504; GO:1905936; 
#=GS A7Y7W3/92-164   AC A7Y7W3
#=GS A7Y7W3/92-164   OS Gallus gallus
#=GS A7Y7W3/92-164   DE Homeobox protein NANOG
#=GS A7Y7W3/92-164   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS A7Y7W3/92-164   DR GO; GO:0005634; GO:0019827; GO:0044212; GO:1902459; 
#=GS G1KQY2/88-154   AC G1KQY2
#=GS G1KQY2/88-154   OS Anolis carolinensis
#=GS G1KQY2/88-154   DE Uncharacterized protein
#=GS G1KQY2/88-154   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GF SQ 3
A5JNG8/191-259          PP--TLPRKTRAAFSEEQMNALVNRFNVQRYLTPAEMKTLAGATGLTYKQVKTWFQNRRMKLKRHQRDSSW--
A7Y7W3/92-164           GESGTRKAKSRTAFSQEQLQTLHQRFQSQKYLSPHQIRELAAALGLTYKQVKTWFQNQRMKFKRCQKESQWVD
G1KQY2/88-154           G----KKVKTRAAFSQKQLQILHHRFQNQKYLSPQQIRELAAALDLTYKQIKTWFQNQRMKFKRTQKESLW--
#=GC scorecons          4000323295959995596439339942969959256649959459999969999995999599296692900
#=GC scorecons_70       ________*_*_***__*___*__**__****_*___*_**_*__************_***_**_****_*__
#=GC scorecons_80       ________*_*_***__*___*__**__*_**_*_____**_*__*****_******_***_**_*__*_*__
#=GC scorecons_90       ________*_*_***__*___*__**__*_**_*_____**_*__*****_******_***_**_*__*_*__
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