# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000720
#=GF DE NK1 homeobox 2
#=GF AC 1.10.10.60/FF/000720
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 35.388
#=GS P42580/100-216  AC P42580
#=GS P42580/100-216  OS Mus musculus
#=GS P42580/100-216  DE NK1 transcription factor-related protein 2
#=GS P42580/100-216  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P42580/100-216  DR GO; GO:0005515; 
#=GS E9PAI8/94-179   AC E9PAI8
#=GS E9PAI8/94-179   OS Mus musculus
#=GS E9PAI8/94-179   DE Homeodomain protein Nkx-1.2T5.1
#=GS E9PAI8/94-179   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS F1SDP4/89-207   AC F1SDP4
#=GS F1SDP4/89-207   OS Sus scrofa
#=GS F1SDP4/89-207   DE Uncharacterized protein
#=GS F1SDP4/89-207   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS I3NFH0/121-210  AC I3NFH0
#=GS I3NFH0/121-210  OS Ictidomys tridecemlineatus
#=GS I3NFH0/121-210  DE Uncharacterized protein
#=GS I3NFH0/121-210  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys; Ictidomys tridecemlineatus; 
#=GS D3Z9E2/129-216  AC D3Z9E2
#=GS D3Z9E2/129-216  OS Rattus norvegicus
#=GS D3Z9E2/129-216  DE NK1 homeobox 2
#=GS D3Z9E2/129-216  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GF SQ 5
P42580/100-216          --RAHQPERWQGVHEGSPEARAVAVGTEESGAEGLPASPGSPGSPRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP
E9PAI8/94-179           -------------------------------AEGLPASPGSPGSPRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ--
F1SDP4/89-207           AEEAEEEEEEEDGPTRFPEARAGALAAAERSSGGLAGSPGSPGSPRPRRRRSEPSCSKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP
I3NFH0/121-210          --------------------------GGESKAE---GCPSSPGSPRPRRRRAEPSCAKPRRARTAFTYEQLVALENKFRSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP
D3Z9E2/129-216          -------------------------------ADGLPASPGSPGSPRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNP
#=GC scorecons          00010001000000000111110100113116555356969999999999969599699999999999999999999996999999999999999999999999999999999999955
#=GC scorecons_70       _______________________________*_____****************_***************************************************************__
#=GC scorecons_80       ______________________________________*_***********_*_**_**********************_*************************************__
#=GC scorecons_90       ______________________________________*_***********_*_**_**********************_*************************************__
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