# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000679
#=GF DE Homeobox protein aristaless
#=GF AC 1.10.10.60/FF/000679
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 59.807
#=GS 3lnqA00/1-58     AC Q06453
#=GS 3lnqA00/1-58     OS Drosophila melanogaster
#=GS 3lnqA00/1-58     DE Homeobox protein aristaless
#=GS 3lnqA00/1-58     DR CATH; 3lnq; A:87-144; 
#=GS 3lnqA00/1-58     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS H9G2W7/1-33      AC H9G2W7
#=GS H9G2W7/1-33      OS Caenorhabditis elegans
#=GS H9G2W7/1-33      DE Homeobox protein unc-30
#=GS H9G2W7/1-33      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G2W7/1-33      DR GO; GO:0005634; GO:0033563; GO:0040012; GO:0043565; GO:0045944; GO:0097154; 
#=GS 3a02A00/1-60     AC Q06453
#=GS 3a02A00/1-60     OS Drosophila melanogaster
#=GS 3a02A00/1-60     DE Homeobox protein aristaless
#=GS 3a02A00/1-60     DR CATH; 3a02; A:91-141; 
#=GS 3a02A00/1-60     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 3a01F00/1-67     AC Q06453
#=GS 3a01F00/1-67     OS Drosophila melanogaster
#=GS 3a01F00/1-67     DE Homeobox protein aristaless
#=GS 3a01F00/1-67     DR CATH; 3a01; F:86-146; 
#=GS 3a01F00/1-67     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 3a01B00/1-67     AC Q06453
#=GS 3a01B00/1-67     OS Drosophila melanogaster
#=GS 3a01B00/1-67     DE Homeobox protein aristaless
#=GS 3a01B00/1-67     DR CATH; 3a01; B:86-142; 
#=GS 3a01B00/1-67     DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS H9G2W8/1-33      AC H9G2W8
#=GS H9G2W8/1-33      OS Caenorhabditis elegans
#=GS H9G2W8/1-33      DE Homeobox protein unc-30
#=GS H9G2W8/1-33      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H9G2W8/1-33      DR GO; GO:0005634; GO:0033563; GO:0040012; GO:0043565; GO:0045944; GO:0097154; 
#=GS G1KHJ8/1-32      AC G1KHJ8
#=GS G1KHJ8/1-32      OS Anolis carolinensis
#=GS G1KHJ8/1-32      DE Uncharacterized protein
#=GS G1KHJ8/1-32      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS A0A077YWX0/1-33  AC A0A077YWX0
#=GS A0A077YWX0/1-33  OS Trichuris trichiura
#=GS A0A077YWX0/1-33  DE Paired superclass homeobox transcription factor
#=GS A0A077YWX0/1-33  DR ORG; Eukaryota; Metazoa; Nematoda; Enoplea; Dorylaimia; Trichinellida; Trichuridae; Trichuris; Trichuris trichiura; 
#=GS C3XWM6/163-204   AC C3XWM6
#=GS C3XWM6/163-204   OS Branchiostoma floridae
#=GS C3XWM6/163-204   DE Uncharacterized protein
#=GS C3XWM6/163-204   DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A0D6LXK2/1-33  AC A0A0D6LXK2
#=GS A0A0D6LXK2/1-33  OS Ancylostoma ceylanicum
#=GS A0A0D6LXK2/1-33  DE Homeobox domain protein
#=GS A0A0D6LXK2/1-33  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; 
#=GS A0A2G9TP62/1-33  AC A0A2G9TP62
#=GS A0A2G9TP62/1-33  OS Teladorsagia circumcincta
#=GS A0A2G9TP62/1-33  DE Homeobox domain protein
#=GS A0A2G9TP62/1-33  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Strongylida; Trichostrongyloidea; Haemonchidae; Teladorsagia; Teladorsagia circumcincta; 
#=GF SQ 11
3lnqA00/1-58             -------RYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQE---
H9G2W7/1-33              --------------------------------MACREEIAVWISLTEPRVRVWFKNRRAKWRKRE---
3a02A00/1-60             -------GSHMTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV-
3a01F00/1-67             APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV-
3a01B00/1-67             APKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV-
H9G2W8/1-33              --------------------------------MACREEIAVWISLTEPRVRVWFKNRRAKWRKRE---
G1KHJ8/1-32              ------------------------------------EELAMRLDLTEARVQVWFQNRRAKWRKREKAG
A0A077YWX0/1-33          --------------------------------MAAREEIALWTSLTEPRVRVWFKNRRAKWRKRE---
C3XWM6/163-204           -------------------------VQTHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERL-
A0A0D6LXK2/1-33          --------------------------------MATREEIAIWISLTEPRVRVWFKNRRAKWRKRE---
A0A2G9TP62/1-33          --------------------------------MATREEIAIWISLTEPRVRVWFKNRRAKWRKRE---
#=GC scorecons           00000000000111111111111111122222434799695475999697699969999979969110
#=GC scorecons_70        ___________________________________*****__*_***_*****************___
#=GC scorecons_80        ____________________________________**_*__*_***_*__***_********_*___
#=GC scorecons_90        ____________________________________**_*____***_*__***_*****_**_*___
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