# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000650
#=GF DE Ventral homeobox
#=GF AC 1.10.10.60/FF/000650
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.777
#=GS Q9DGM8/102-177     AC Q9DGM8
#=GS Q9DGM8/102-177     OS Danio rerio
#=GS Q9DGM8/102-177     DE Ventral homeobox
#=GS Q9DGM8/102-177     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9DGM8/102-177     DR GO; GO:0009953; GO:0042661; GO:0042663; GO:0042803; GO:0046982; 
#=GS H2L4T1/94-182      AC H2L4T1
#=GS H2L4T1/94-182      OS Oryzias latipes
#=GS H2L4T1/94-182      DE Uncharacterized protein
#=GS H2L4T1/94-182      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A4VAJ9/56-132      AC A4VAJ9
#=GS A4VAJ9/56-132      OS Danio rerio
#=GS A4VAJ9/56-132      DE Vox protein
#=GS A4VAJ9/56-132      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A4VAJ9/56-132      DR GO; GO:0009953; GO:0042661; GO:0042663; GO:0042803; GO:0046982; 
#=GS Q9DG33/102-177     AC Q9DG33
#=GS Q9DG33/102-177     OS Danio rerio
#=GS Q9DG33/102-177     DE Homeobox protein VEGA
#=GS Q9DG33/102-177     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q9DG33/102-177     DR GO; GO:0009953; GO:0042661; GO:0042663; GO:0042803; GO:0046982; 
#=GS Q568V6/125-200     AC Q568V6
#=GS Q568V6/125-200     OS Danio rerio
#=GS Q568V6/125-200     DE Vox protein
#=GS Q568V6/125-200     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q568V6/125-200     DR GO; GO:0009953; GO:0042661; GO:0042663; GO:0042803; GO:0046982; 
#=GS A0A3P9K6S2/94-183  AC A0A3P9K6S2
#=GS A0A3P9K6S2/94-183  OS Oryzias latipes
#=GS A0A3P9K6S2/94-183  DE Ventral homeobox
#=GS A0A3P9K6S2/94-183  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A3P9J9R6/94-182  AC A0A3P9J9R6
#=GS A0A3P9J9R6/94-182  OS Oryzias latipes
#=GS A0A3P9J9R6/94-182  DE Ventral homeobox
#=GS A0A3P9J9R6/94-182  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 7
Q9DGM8/102-177             --------------CASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ
H2L4T1/94-182              -YSSGYESEAASSECHSVEDRSGVDKDAPPRRVRTKFTPKQILKLEKVFSKHKYLDAGERVKTAQKLNLSETQVRTWFQNRRMKLKREVQ
A4VAJ9/56-132              -------------ECASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ
Q9DG33/102-177             --------------CASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ
Q568V6/125-200             --------------CASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ
A0A3P9K6S2/94-183          GYSSGYESEAASSECHSVEDRSGVDKDAPQRRVRTKFTPKQILKLEKVFSKHKYLDAGERVKTAQKLNLTETQVRTWFQNRRMKLKREVQ
A0A3P9J9R6/94-182          -YSSGYESEAASSECHSVEDRSGVDKDAPQRRVRTKFTPKQIFKLEKVFSKHKYLDAGERVKTAQKLNLSETQVRTWFQNRRMKLKREVQ
#=GC scorecons             011111111111139499995555699554996999999599399996959999999999999949959799969999999999999999
#=GC scorecons_70          ______________*_****____***___*********_**_******_**************_**_**********************
#=GC scorecons_80          ______________*_****_____**___**_******_**_****_*_**************_**_*_***_****************
#=GC scorecons_90          ______________*_****_____**___**_******_**_****_*_**************_**_*_***_****************
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