# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000581
#=GF DE Homeobox protein six1a
#=GF AC 1.10.10.60/FF/000581
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.136
#=GS O17894/222-287      AC O17894
#=GS O17894/222-287      OS Caenorhabditis elegans
#=GS O17894/222-287      DE Homeobox protein unc-39
#=GS O17894/222-287      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS O17894/222-287      DR GO; GO:0001764; GO:0005515; GO:0005634; GO:0008078; GO:0018991; GO:0030334; GO:0040011; 
#=GS T1G8C7/124-187      AC T1G8C7
#=GS T1G8C7/124-187      OS Helobdella robusta
#=GS T1G8C7/124-187      DE Uncharacterized protein
#=GS T1G8C7/124-187      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS T1FKB2/119-177      AC T1FKB2
#=GS T1FKB2/119-177      OS Helobdella robusta
#=GS T1FKB2/119-177      DE Uncharacterized protein
#=GS T1FKB2/119-177      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS B3SAU8/128-180      AC B3SAU8
#=GS B3SAU8/128-180      OS Trichoplax adhaerens
#=GS B3SAU8/128-180      DE Uncharacterized protein
#=GS B3SAU8/128-180      DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS B5LDU4/6-58         AC B5LDU4
#=GS B5LDU4/6-58         OS Trichoplax adhaerens
#=GS B5LDU4/6-58         DE Six1/2
#=GS B5LDU4/6-58         DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; 
#=GS A0A369SAT1/188-240  AC A0A369SAT1
#=GS A0A369SAT1/188-240  OS Trichoplax sp. H2
#=GS A0A369SAT1/188-240  DE Homeobox protein six1a
#=GS A0A369SAT1/188-240  DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax sp. H2; 
#=GS A8WY36/217-284      AC A8WY36
#=GS A8WY36/217-284      OS Caenorhabditis briggsae
#=GS A8WY36/217-284      DE Protein CBR-UNC-39
#=GS A8WY36/217-284      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5TN77/233-300  AC A0A2G5TN77
#=GS A0A2G5TN77/233-300  OS Caenorhabditis nigoni
#=GS A0A2G5TN77/233-300  DE Uncharacterized protein
#=GS A0A2G5TN77/233-300  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A2G5TNU2/228-295  AC A0A2G5TNU2
#=GS A0A2G5TNU2/228-295  OS Caenorhabditis nigoni
#=GS A0A2G5TNU2/228-295  DE Uncharacterized protein
#=GS A0A2G5TNU2/228-295  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 9
O17894/222-287              -YSFKDSSRKFLKQFFRNVSEYPTQEQKREISRATGLKIVQISNWFKNRRQRDKSNNSAKCSPPSSS-----
T1G8C7/124-187              ----KVRVRMQLNKSFQM-NHYPTESEKVRLCKETSLTRVQINNWFKNKRQRFKTKNFGK---NDSDEDDDL
T1FKB2/119-177              ---VKVRVRMQLNKSFQM-NHYPKESEKVRLCRETSLTRVQVNTWFKNKRHRFNAKNFGK---NDS------
B3SAU8/128-180              -YSFKESSRKMLVEYYQR-NPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA-----------------
B5LDU4/6-58                 -YSFKESSRKMLVEYYQR-NPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA-----------------
A0A369SAT1/188-240          -YSFKESSRKMLVEYYQR-NPYPTSEEKAIIAEAASLTKVQVSNWFKNKRQRDRA-----------------
A8WY36/217-284              VYSFKDSSRKYLKKFFNDVNQYPNQEQKREISRATGLKVVQISNWFKNRRQRDKTDNG---SPPSSSASSN-
A0A2G5TN77/233-300          VYSFKDSSRKYLKKFFNDVNQYPNQEQKREISRATGLKVVQISNWFKNRRQRDKTDNG---SPPSSSASSN-
A0A2G5TNU2/228-295          VYSFKDSSRKYLKKFFNDVNQYPNQEQKREISRATGLKVVQISNWFKNRRQRDKTDNG---SPPSSSASSN-
#=GC scorecons              044594559539354753174995456943645566953996679999797946523101011223100000
#=GC scorecons_70           ____*___*__*___*___*_**___**__*___*_*__*************____________________
#=GC scorecons_80           ____*___*__*___*___*_**____*________*__**__*****_***____________________
#=GC scorecons_90           ____*___*__*_________**____*________*__**___****_*_*____________________
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