# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000556
#=GF DE SIX homeobox 9
#=GF AC 1.10.10.60/FF/000556
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 62.937
#=GS Q94166/139-190      AC Q94166
#=GS Q94166/139-190      OS Caenorhabditis elegans
#=GS Q94166/139-190      DE Homeobox protein ceh-33
#=GS Q94166/139-190      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q94166/139-190      DR GO; GO:0003700; GO:0006355; 
#=GS T1G0W2/125-184      AC T1G0W2
#=GS T1G0W2/125-184      OS Helobdella robusta
#=GS T1G0W2/125-184      DE Six-type transcription factor 1/2f
#=GS T1G0W2/125-184      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS T1EJ85/123-182      AC T1EJ85
#=GS T1EJ85/123-182      OS Helobdella robusta
#=GS T1EJ85/123-182      DE Six-type transcription factor 1/2d
#=GS T1EJ85/123-182      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS A0A3P9H9J0/128-194  AC A0A3P9H9J0
#=GS A0A3P9H9J0/128-194  OS Oryzias latipes
#=GS A0A3P9H9J0/128-194  DE SIX homeobox 9
#=GS A0A3P9H9J0/128-194  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS A0A2G5TF51/139-190  AC A0A2G5TF51
#=GS A0A2G5TF51/139-190  OS Caenorhabditis nigoni
#=GS A0A2G5TF51/139-190  DE Uncharacterized protein
#=GS A0A2G5TF51/139-190  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261CII1/177-228  AC A0A261CII1
#=GS A0A261CII1/177-228  OS Caenorhabditis latens
#=GS A0A261CII1/177-228  DE Uncharacterized protein
#=GS A0A261CII1/177-228  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A8X311/139-190      AC A8X311
#=GS A8X311/139-190      OS Caenorhabditis briggsae
#=GS A8X311/139-190      DE Protein CBR-CEH-33
#=GS A8X311/139-190      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A1I7UVR4/138-189  AC A0A1I7UVR4
#=GS A0A1I7UVR4/138-189  OS Caenorhabditis tropicalis
#=GS A0A1I7UVR4/138-189  DE Uncharacterized protein
#=GS A0A1I7UVR4/138-189  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A3P9K163/126-190  AC A0A3P9K163
#=GS A0A3P9K163/126-190  OS Oryzias latipes
#=GS A0A3P9K163/126-190  DE SIX homeobox 9
#=GS A0A3P9K163/126-190  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GS H2LQY8/128-194      AC H2LQY8
#=GS H2LQY8/128-194      OS Oryzias latipes
#=GS H2LQY8/128-194      DE Uncharacterized protein
#=GS H2LQY8/128-194      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; 
#=GF SQ 10
Q94166/139-190              ---CFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA--------------
T1G0W2/125-184              TSYCFKDRSRILLRDWYAKNQYPNPKEKRDLAKQTGLSSTQVSNWFKNRRQRDRTAADLG---------
T1EJ85/123-182              -SYCFKEKSRSILKDCYKKNPYPSPREKKNLAENTGLTTTQVSNWFKNRRQRDRANEAKEK--------
A0A3P9H9J0/128-194          --YCFKEKSRRILKEWYRRGPYPSTREKRELAAATGLTATQVSNWFKNRRQRERATRVGSSAQDNSRPQ
A0A2G5TF51/139-190          ---CFRDKSRVLLRDWYVRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA--------------
A0A261CII1/177-228          ---CFRDKSRVLLRDWYCRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA--------------
A8X311/139-190              ---CFRDKSRVLLRDWYVRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA--------------
A0A1I7UVR4/138-189          ---CFRDKSRVLLRDWYLRNSYPSPREKRELAEKTHLTVTQVSNWFKNRRQRDRA--------------
A0A3P9K163/126-190          --YCFKEKSRGILKEWYRRGPYPSTREKRELAAATGLTATQVSNWFKNRRQRERATRVGSSAQGNSR--
H2LQY8/128-194              --YCFKEKSRRILKEWYRRGPYPSTREKRELAAATGLTATQVSNWFKNRRQRERATRVGSSAQDNSRPQ
#=GC scorecons              002997689936967793755997689986994495974999999999999979711111100000000
#=GC scorecons_70           ___*******_******_*__***_*******__*_**_****************______________
#=GC scorecons_80           ___**__***__*__**_*__***_****_**__*_**_*************_**______________
#=GC scorecons_90           ___**___**__*___*____**___***_**__*_*__*************_*_______________
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