# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000552
#=GF DE LIM homeobox transcription factor 1 beta
#=GF AC 1.10.10.60/FF/000552
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.198
#=GS Q8UVR3/213-278      AC Q8UVR3
#=GS Q8UVR3/213-278      OS Xenopus laevis
#=GS Q8UVR3/213-278      DE LIM homeobox transcription factor 1-beta.1
#=GS Q8UVR3/213-278      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q8UVR3/213-278      DR GO; GO:0003700; GO:0005634; GO:0030182; GO:0039020; GO:0072013; 
#=GS W4YEH6/168-232      AC W4YEH6
#=GS W4YEH6/168-232      OS Strongylocentrotus purpuratus
#=GS W4YEH6/168-232      DE Uncharacterized protein
#=GS W4YEH6/168-232      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS A0A3B4V6W9/179-244  AC A0A3B4V6W9
#=GS A0A3B4V6W9/179-244  OS Seriola dumerili
#=GS A0A3B4V6W9/179-244  DE Uncharacterized protein
#=GS A0A3B4V6W9/179-244  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Carangiformes; Carangidae; Seriola; Seriola dumerili; 
#=GS G1N909/121-189      AC G1N909
#=GS G1N909/121-189      OS Meleagris gallopavo
#=GS G1N909/121-189      DE LIM homeobox transcription factor 1 beta
#=GS G1N909/121-189      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris; Meleagris gallopavo; 
#=GS A0A3Q1GUJ6/212-277  AC A0A3Q1GUJ6
#=GS A0A3Q1GUJ6/212-277  OS Acanthochromis polyacanthus
#=GS A0A3Q1GUJ6/212-277  DE Uncharacterized protein
#=GS A0A3Q1GUJ6/212-277  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Pomacentridae; Acanthochromis; Acanthochromis polyacanthus; 
#=GS A0A3Q3AKK7/182-247  AC A0A3Q3AKK7
#=GS A0A3Q3AKK7/182-247  OS Kryptolebias marmoratus
#=GS A0A3Q3AKK7/182-247  DE Uncharacterized protein
#=GS A0A3Q3AKK7/182-247  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Rivulidae; Kryptolebias; Kryptolebias marmoratus; 
#=GS G3PE70/191-256      AC G3PE70
#=GS G3PE70/191-256      OS Gasterosteus aculeatus
#=GS G3PE70/191-256      DE LIM homeobox transcription factor 1, beta b
#=GS G3PE70/191-256      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus; Gasterosteus aculeatus; 
#=GS A0A3P8Y3K5/168-234  AC A0A3P8Y3K5
#=GS A0A3P8Y3K5/168-234  OS Esox lucius
#=GS A0A3P8Y3K5/168-234  DE Uncharacterized protein
#=GS A0A3P8Y3K5/168-234  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Esociformes; Esocidae; Esox; Esox lucius; 
#=GS A0A096LW35/189-254  AC A0A096LW35
#=GS A0A096LW35/189-254  OS Poecilia formosa
#=GS A0A096LW35/189-254  DE Uncharacterized protein
#=GS A0A096LW35/189-254  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poecilia; Poecilia formosa; 
#=GS A0A3B4YID8/179-244  AC A0A3B4YID8
#=GS A0A3B4YID8/179-244  OS Seriola lalandi dorsalis
#=GS A0A3B4YID8/179-244  DE Uncharacterized protein
#=GS A0A3B4YID8/179-244  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Carangiformes; Carangidae; Seriola; Seriola lalandi; Seriola lalandi dorsalis; 
#=GS A0A1L8F1U0/213-278  AC A0A1L8F1U0
#=GS A0A1L8F1U0/213-278  OS Xenopus laevis
#=GS A0A1L8F1U0/213-278  DE Uncharacterized protein
#=GS A0A1L8F1U0/213-278  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GF SQ 11
Q8UVR3/213-278              KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLAR---
W4YEH6/168-232              ---KGPKRPRTILTTSQRRAFKASFEVSSKPCRKVRETLAKETGLSVRVVQVWFQNQRAKMKKLARKS-
A0A3B4V6W9/179-244          KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLAR---
G1N909/121-189              KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKXXXXXRRHQ
A0A3Q1GUJ6/212-277          KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKVRSVMS---
A0A3Q3AKK7/182-247          -DPRRPKRPRTILSTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR--
G3PE70/191-256              -DPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR--
A0A3P8Y3K5/168-234          AEHKQPKRPRTILSTQQRRAFKASFEVSSKPCRKVRETLATETGLSVRVVQVWFQNQRAKMKKLARR--
A0A096LW35/189-254          -DPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARR--
A0A3B4YID8/179-244          KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLAR---
A0A1L8F1U0/213-278          KDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKIKKLAR---
#=GC scorecons              255769999999979799999999999999999999999969999999999999999999454547200
#=GC scorecons_70           ___*************************************_*******************_____*___
#=GC scorecons_80           ___*_********_*_************************_*******************_____*___
#=GC scorecons_90           _____********_*_************************_*******************_________
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