# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000550
#=GF DE Homeobox domaincontaining protein
#=GF AC 1.10.10.60/FF/000550
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 93.899
#=GS Q9TYT0/213-308      AC Q9TYT0
#=GS Q9TYT0/213-308      OS Caenorhabditis elegans
#=GS Q9TYT0/213-308      DE HMBOX (Mammalian HoMeoBOX gene) homolog
#=GS Q9TYT0/213-308      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q9TYT0/213-308      DR GO; GO:0005515; GO:0005634; 
#=GS W4Z3N8/257-352      AC W4Z3N8
#=GS W4Z3N8/257-352      OS Strongylocentrotus purpuratus
#=GS W4Z3N8/257-352      DE Uncharacterized protein
#=GS W4Z3N8/257-352      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4XHC3/129-224      AC W4XHC3
#=GS W4XHC3/129-224      OS Strongylocentrotus purpuratus
#=GS W4XHC3/129-224      DE Uncharacterized protein
#=GS W4XHC3/129-224      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS B7PRM6/308-398      AC B7PRM6
#=GS B7PRM6/308-398      OS Ixodes scapularis
#=GS B7PRM6/308-398      DE Homeobox domaincontaining protein
#=GS B7PRM6/308-398      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS H3FM06/331-402      AC H3FM06
#=GS H3FM06/331-402      OS Pristionchus pacificus
#=GS H3FM06/331-402      DE Uncharacterized protein
#=GS H3FM06/331-402      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A0A260ZX37/258-353  AC A0A260ZX37
#=GS A0A260ZX37/258-353  OS Caenorhabditis latens
#=GS A0A260ZX37/258-353  DE Uncharacterized protein
#=GS A0A260ZX37/258-353  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A8Y1J4/211-305      AC A8Y1J4
#=GS A8Y1J4/211-305      OS Caenorhabditis briggsae
#=GS A8Y1J4/211-305      DE Protein CBR-HMBX-1
#=GS A8Y1J4/211-305      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS G0NMG5/242-336      AC G0NMG5
#=GS G0NMG5/242-336      OS Caenorhabditis brenneri
#=GS G0NMG5/242-336      DE Uncharacterized protein
#=GS G0NMG5/242-336      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LY08/258-353      AC E3LY08
#=GS E3LY08/258-353      OS Caenorhabditis remanei
#=GS E3LY08/258-353      DE CRE-HMBX-1 protein
#=GS E3LY08/258-353      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS B7PGL8/363-454      AC B7PGL8
#=GS B7PGL8/363-454      OS Ixodes scapularis
#=GS B7PGL8/363-454      DE Homeodomain-containing DNA- binding protein, putative
#=GS B7PGL8/363-454      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A2A6BKH1/300-371  AC A0A2A6BKH1
#=GS A0A2A6BKH1/300-371  OS Pristionchus pacificus
#=GS A0A2A6BKH1/300-371  DE Hmbx-1
#=GS A0A2A6BKH1/300-371  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 11
Q9TYT0/213-308              ---IPQRRERYVFRPILIRMLESFFTQTPFPDLPRRVEIANACNHVLKMDKKGVGLMPKEVVSPQVVSNWFANKRKELRRRSAEASAASTSSASSSASS
W4Z3N8/257-352              AANSGKRRERFVWKDNCLRVLEAYFKKNPYPNDMERIRLSDACDA-LQQSLLGNDIPEHNRVNPSKVYNWFANRRKEANRKKRMAAEPIITRTVSHD--
W4XHC3/129-224              AANSGKRRERFVWKDNCLRVLEAYFKKNPYPNDMERIRLSDACDA-LQQSLLGNDIPEHNRVNPSKVYNWFANRRKEANRKKRMAAEPIITRTVSHD--
B7PRM6/308-398              --RLTRQRERFSFDRGHLGILEGHYQRNSYPNQVEKEAIAEECNAYTGAH----GLDRCGPMTATNVNYWFANRRKRDFHRVDMSSPSVVGNNNGNN--
H3FM06/331-402              ------------FRPVLLRLLDQFFTETPFPDTQRRQEIANACNAALQQDKKGVQLMPKEVVSPQVVSNWFANKRKELRRKTDP---------------
A0A260ZX37/258-353          ---IPQRRERYVFRPILIRMLESFFTQTPFPDLPRRIEIATACNHVLQLDKKGVGLMPKEIVSPQVVSNWFANKRKELRRRSAEATAASTSSASSTSSS
A8Y1J4/211-305              ---IPQRRERYVFRPILIKMLENFFNQTPFPDLPRRVEIATACNHVLQLDKKGVGLMPKEVVSPQVVSNWFANKRKELRRRSAEASAASTSSASSTVS-
G0NMG5/242-336              ---IPQRRERYVFRPILIRMLESFFHQTPFPDLPRRVEIATACNHLLQLDKKGVSLMPKEVVSPQVVSNWFANKRKELRRRSAEATTSSASSTSSASV-
E3LY08/258-353              ---IPQRRERYVFRPILIRMLESFFTQTPFPDLPRRIEIATACNHVLQLDKKGVGLMPKEIVSPQVVSNWFANKRKELRRRSAEATAASTSSASSTSSS
B7PGL8/363-454              ----PLKRERFTFKSAHLAVLERYYERDPYPDAQTREQIVEECNEAVERPER--PLTEREKVSLPVVNNWFNNRRKEAKKQLRQQHAAAMAAAASASG-
A0A2A6BKH1/300-371          ------------FRPVLLRLLDQFFTETPFPDTQRRQEIANACNAALQQDKKGVQLMPKEVVSPQVVSNWFANKRKELRRKTDP---------------
#=GC scorecons              000232455543654346559736745577963358347646974265343353474455375644947997979974476343322322223242200
#=GC scorecons_70           ____________*____*__**_**___****___*__*__***__*________*_____*_*__*_*********__**__________________
#=GC scorecons_80           ____________________**__*___***____*__*___**___________*_____*____*_*****_***______________________
#=GC scorecons_90           ____________________*_________*____*______*_______________________*__**_*_**_______________________
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