# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000532
#=GF DE C. Elegans Homeobox
#=GF AC 1.10.10.60/FF/000532
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 59.250
#=GS P22711/286-360      AC P22711
#=GS P22711/286-360      OS Drosophila melanogaster
#=GS P22711/286-360      DE Muscle-specific homeobox protein tinman
#=GS P22711/286-360      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS P22711/286-360      DR GO; GO:0000980; GO:0000981; GO:0001708; GO:0003677; GO:0005634; GO:0007280; GO:0007419; GO:0007435; GO:0007498; GO:0007501; GO:0007506; GO:0007507; GO:0007510; GO:0007552; GO:0008354; GO:0008406; GO:0010002; GO:0035050; GO:0035051; GO:0045892; GO:0045893; GO:0045944; GO:0048542; GO:0048615; GO:0055007; GO:0061101; GO:0061320; GO:0071907; 
#=GS P43688/98-185       AC P43688
#=GS P43688/98-185       OS Mus musculus
#=GS P43688/98-185       DE Homeobox protein Nkx-2.6
#=GS P43688/98-185       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS P43688/98-185       DR GO; GO:0000977; GO:0001228; GO:0003700; GO:0007507; GO:0008284; GO:0021854; GO:0030154; GO:0035050; GO:0043066; GO:0043586; GO:0045944; GO:0048565; GO:0055014; GO:0055015; GO:0060037; GO:0060039; 
#=GS G5EE18/94-172       AC G5EE18
#=GS G5EE18/94-172       OS Caenorhabditis elegans
#=GS G5EE18/94-172       DE C. Elegans Homeobox
#=GS G5EE18/94-172       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EE18/94-172       DR GO; GO:0000981; GO:0003700; GO:0005634; GO:0006357; GO:0034243; GO:0045944; GO:0050807; 
#=GS B6IDS0/286-360      AC B6IDS0
#=GS B6IDS0/286-360      OS Drosophila melanogaster
#=GS B6IDS0/286-360      DE FI07263p
#=GS B6IDS0/286-360      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS B3P006/286-360      AC B3P006
#=GS B3P006/286-360      OS Drosophila erecta
#=GS B3P006/286-360      DE GG24587
#=GS B3P006/286-360      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4I3G2/286-360      AC B4I3G2
#=GS B4I3G2/286-360      OS Drosophila sechellia
#=GS B4I3G2/286-360      DE Tin
#=GS B4I3G2/286-360      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B3LVC4/274-349      AC B3LVC4
#=GS B3LVC4/274-349      OS Drosophila ananassae
#=GS B3LVC4/274-349      DE Uncharacterized protein
#=GS B3LVC4/274-349      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4GZB3/294-369      AC B4GZB3
#=GS B4GZB3/294-369      OS Drosophila persimilis
#=GS B4GZB3/294-369      DE GL27335
#=GS B4GZB3/294-369      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A1W4VXG8/312-386  AC A0A1W4VXG8
#=GS A0A1W4VXG8/312-386  OS Drosophila ficusphila
#=GS A0A1W4VXG8/312-386  DE muscle-specific homeobox protein tinman
#=GS A0A1W4VXG8/312-386  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PQU7/290-364      AC B4PQU7
#=GS B4PQU7/290-364      OS Drosophila yakuba
#=GS B4PQU7/290-364      DE Uncharacterized protein
#=GS B4PQU7/290-364      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS Q29AZ8/294-369      AC Q29AZ8
#=GS Q29AZ8/294-369      OS Drosophila pseudoobscura pseudoobscura
#=GS Q29AZ8/294-369      DE Uncharacterized protein
#=GS Q29AZ8/294-369      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0K697/303-378  AC A0A3B0K697
#=GS A0A3B0K697/303-378  OS Drosophila guanche
#=GS A0A3B0K697/303-378  DE Blast:Muscle-specific homeobox protein tinman
#=GS A0A3B0K697/303-378  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GF SQ 12
P22711/286-360              ----------NSNPGSNSGSTKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
P43688/98-185               MTDRGVGNLSGDMRRGGPVSTRT-RPQRKSRVLFSQAQVLALERRFKQQRYLTAPEREHLASALQLTSTQVKIWFQNRRYKSKSQRQDQ------
G5EE18/94-172               ----------------DTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKRLAQDRTLQLSQ
B6IDS0/286-360              ----------NSNPGSNSGSTKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
B3P006/286-360              ----------NSNPGSNSGSSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
B4I3G2/286-360              ----------NSNPGSNSSSTKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
B3LVC4/274-349              ---------SGSSSHGSNGSSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
B4GZB3/294-369              ---------NHSSSINSNGSSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGSEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
A0A1W4VXG8/312-386          ----------VSNHGSSNGSSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
B4PQU7/290-364              ----------NSNPGSNSGSSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
Q29AZ8/294-369              ---------NHSSSINSNGPSKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGSEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
A0A3B0K697/303-378          ---------SNHSSINSNGSTKP-RMKRKPRVLFSQAQVLELECRFRLKKYLTGSEREIIAQKLNLSATQVKIWFQNRRYKSKR---------GD
#=GC scorecons              00000000012322234446475074799799997969966994997467979649994696495967999999999999979600000000044
#=GC scorecons_70           ___________________*_*__*_*************_***_***_*****__***_***_*_*_*****************___________
#=GC scorecons_80           ________________________*_***_****_*_**__**_**____***__***__*__*_*__*************_*____________
#=GC scorecons_90           ___________________________**_****_*_**__**_**____*_*__***__*__*_*__*************_*____________
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