# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000516
#=GF DE Transcription factor Toy
#=GF AC 1.10.10.60/FF/000516
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 34.666
#=GS G5EE71/52-134       AC G5EE71
#=GS G5EE71/52-134       OS Caenorhabditis elegans
#=GS G5EE71/52-134       DE MAB-18
#=GS G5EE71/52-134       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EE71/52-134       DR GO; GO:0003700; GO:0005515; GO:0005634; GO:0005737; GO:0006355; GO:0009952; GO:0030155; GO:0045138; GO:0045165; GO:0045944; 
#=GS L0MPR7/260-336      AC L0MPR7
#=GS L0MPR7/260-336      OS Drosophila melanogaster
#=GS L0MPR7/260-336      DE Twin of eyeless, isoform C
#=GS L0MPR7/260-336      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS L0MPR7/260-336      DR GO; GO:0000977; GO:0000981; GO:0006357; GO:0008056; GO:0010628; GO:0016319; GO:0035214; GO:0045944; GO:0048749; GO:0048854; 
#=GS Q95ZV2/25-107       AC Q95ZV2
#=GS Q95ZV2/25-107       OS Caenorhabditis elegans
#=GS Q95ZV2/25-107       DE Uncharacterized protein
#=GS Q95ZV2/25-107       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q95ZV2/25-107       DR GO; GO:0003700; GO:0005634; GO:0005737; GO:0006355; GO:0009952; GO:0030155; GO:0045138; GO:0045165; GO:0045944; 
#=GS G5EDS1/211-293      AC G5EDS1
#=GS G5EDS1/211-293      OS Caenorhabditis elegans
#=GS G5EDS1/211-293      DE Variable abnormal-3
#=GS G5EDS1/211-293      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS G5EDS1/211-293      DR GO; GO:0003700; GO:0005515; GO:0005634; GO:0005737; GO:0006355; GO:0009952; GO:0030155; GO:0045138; GO:0045165; GO:0045944; 
#=GS Q9V490/260-340      AC Q9V490
#=GS Q9V490/260-340      OS Drosophila melanogaster
#=GS Q9V490/260-340      DE GH14454p
#=GS Q9V490/260-340      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9V490/260-340      DR GO; GO:0000977; GO:0000981; GO:0006357; GO:0008056; GO:0010628; GO:0016319; GO:0035214; GO:0045944; GO:0048749; GO:0048854; 
#=GS Q9XZC2/260-340      AC Q9XZC2
#=GS Q9XZC2/260-340      OS Drosophila melanogaster
#=GS Q9XZC2/260-340      DE Transcription factor Toy
#=GS Q9XZC2/260-340      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9XZC2/260-340      DR GO; GO:0000977; GO:0000981; GO:0006357; GO:0008056; GO:0010628; GO:0016319; GO:0035214; GO:0045944; GO:0048749; GO:0048854; 
#=GS K7H3W1/44-127       AC K7H3W1
#=GS K7H3W1/44-127       OS Caenorhabditis japonica
#=GS K7H3W1/44-127       DE Uncharacterized protein
#=GS K7H3W1/44-127       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A2G5SPT6/70-151   AC A0A2G5SPT6
#=GS A0A2G5SPT6/70-151   OS Caenorhabditis nigoni
#=GS A0A2G5SPT6/70-151   DE Uncharacterized protein
#=GS A0A2G5SPT6/70-151   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A1I7U0Y6/41-123   AC A0A1I7U0Y6
#=GS A0A1I7U0Y6/41-123   OS Caenorhabditis tropicalis
#=GS A0A1I7U0Y6/41-123   DE Uncharacterized protein
#=GS A0A1I7U0Y6/41-123   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS E3M2Y9/214-296      AC E3M2Y9
#=GS E3M2Y9/214-296      OS Caenorhabditis remanei
#=GS E3M2Y9/214-296      DE CRE-VAB-3 protein
#=GS E3M2Y9/214-296      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A261CQS1/265-347  AC A0A261CQS1
#=GS A0A261CQS1/265-347  OS Caenorhabditis latens
#=GS A0A261CQS1/265-347  DE Uncharacterized protein
#=GS A0A261CQS1/265-347  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A260Z4K8/244-326  AC A0A260Z4K8
#=GS A0A260Z4K8/244-326  OS Caenorhabditis remanei
#=GS A0A260Z4K8/244-326  DE Uncharacterized protein
#=GS A0A260Z4K8/244-326  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A0R3P0G3/258-335  AC A0A0R3P0G3
#=GS A0A0R3P0G3/258-335  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3P0G3/258-335  DE Uncharacterized protein, isoform B
#=GS A0A0R3P0G3/258-335  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GF SQ 13
G5EE71/52-134               --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
L0MPR7/260-336              ---RLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPE----VWFSNRRAKWRREEKMRTQRRSADTVDGSG--
Q95ZV2/25-107               --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
G5EDS1/211-293              --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
Q9V490/260-340              ---RLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSG--
Q9XZC2/260-340              ---RLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAKWRREEKMRTQRRSADTVDGSG--
K7H3W1/44-127               -RMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-NMDSSLSN
A0A2G5SPT6/70-151           ARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRSKRSCG-TMDSN---
A0A1I7U0Y6/41-123           --MRLKRKLQRNRTSFSQVQIESLEKEFERTHYPDVFARERLAQKISLPEARIQVWFSNRRAKWRREEKMRNKRSSG-PMESSLSN
E3M2Y9/214-296              --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
A0A261CQS1/265-347          --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
A0A260Z4K8/244-326          --MRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNRRAKWRREEKMRNKRSSG-TMDSSLSN
A0A0R3P0G3/258-335          ---RLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPE----VWFSNRRAKWRREEKMRTQRRSADNVGGSSG-
#=GC scorecons              00299999999999996559979999999999999999999995995999444499999999999999999569586166768321
#=GC scorecons_70           ___*************___************************_**_***____*****************_**_*__***_*___
#=GC scorecons_80           ___*************___**_*********************_**_***____*****************__*_*____*_*___
#=GC scorecons_90           ___*************___**_*********************_**_***____*****************__*____________
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