# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000469
#=GF DE Homeobox protein ceh-30
#=GF AC 1.10.10.60/FF/000469
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 36.245
#=GS Q22909/84-157      AC Q22909
#=GS Q22909/84-157      OS Caenorhabditis elegans
#=GS Q22909/84-157      DE Homeobox protein ceh-30
#=GS Q22909/84-157      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q22909/84-157      DR GO; GO:0005634; GO:0007399; GO:0007548; GO:0043066; 
#=GS Q22910/87-162      AC Q22910
#=GS Q22910/87-162      OS Caenorhabditis elegans
#=GS Q22910/87-162      DE Homeobox protein ceh-31
#=GS Q22910/87-162      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A2H2IEG0/87-160  AC A0A2H2IEG0
#=GS A0A2H2IEG0/87-160  OS Caenorhabditis japonica
#=GS A0A2H2IEG0/87-160  DE Uncharacterized protein
#=GS A0A2H2IEG0/87-160  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A8XJD1/92-167      AC A8XJD1
#=GS A8XJD1/92-167      OS Caenorhabditis briggsae
#=GS A8XJD1/92-167      DE Protein CBR-CEH-31
#=GS A8XJD1/92-167      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A261CT28/92-167  AC A0A261CT28
#=GS A0A261CT28/92-167  OS Caenorhabditis latens
#=GS A0A261CT28/92-167  DE Uncharacterized protein
#=GS A0A261CT28/92-167  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5SRK0/92-167  AC A0A2G5SRK0
#=GS A0A2G5SRK0/92-167  OS Caenorhabditis nigoni
#=GS A0A2G5SRK0/92-167  DE Uncharacterized protein
#=GS A0A2G5SRK0/92-167  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS G0M7E4/92-167      AC G0M7E4
#=GS G0M7E4/92-167      OS Caenorhabditis brenneri
#=GS G0M7E4/92-167      DE CBN-CEH-31 protein
#=GS G0M7E4/92-167      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LCQ4/92-167      AC E3LCQ4
#=GS E3LCQ4/92-167      OS Caenorhabditis remanei
#=GS E3LCQ4/92-167      DE CRE-CEH-31 protein
#=GS E3LCQ4/92-167      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A1I7UAL0/92-168  AC A0A1I7UAL0
#=GS A0A1I7UAL0/92-168  OS Caenorhabditis tropicalis
#=GS A0A1I7UAL0/92-168  DE Uncharacterized protein
#=GS A0A1I7UAL0/92-168  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS A0A2G5SRF9/73-150  AC A0A2G5SRF9
#=GS A0A2G5SRF9/73-150  OS Caenorhabditis nigoni
#=GS A0A2G5SRF9/73-150  DE Uncharacterized protein
#=GS A0A2G5SRF9/73-150  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XJD0/73-150      AC A8XJD0
#=GS A8XJD0/73-150      OS Caenorhabditis briggsae
#=GS A8XJD0/73-150      DE Homeobox protein ceh-30
#=GS A8XJD0/73-150      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A1I7UAL1/79-155  AC A0A1I7UAL1
#=GS A0A1I7UAL1/79-155  OS Caenorhabditis tropicalis
#=GS A0A1I7UAL1/79-155  DE Uncharacterized protein
#=GS A0A1I7UAL1/79-155  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0M7E3/79-154      AC G0M7E3
#=GS G0M7E3/79-154      OS Caenorhabditis brenneri
#=GS G0M7E3/79-154      DE CBN-CEH-30 protein
#=GS G0M7E3/79-154      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A261CSR2/79-155  AC A0A261CSR2
#=GS A0A261CSR2/79-155  OS Caenorhabditis latens
#=GS A0A261CSR2/79-155  DE Uncharacterized protein
#=GS A0A261CSR2/79-155  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2H2IGP1/83-158  AC A0A2H2IGP1
#=GS A0A2H2IGP1/83-158  OS Caenorhabditis japonica
#=GS A0A2H2IGP1/83-158  DE Uncharacterized protein
#=GS A0A2H2IGP1/83-158  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS E3LCQ5/79-155      AC E3LCQ5
#=GS E3LCQ5/79-155      OS Caenorhabditis remanei
#=GS E3LCQ5/79-155      DE CRE-CEH-30 protein
#=GS E3LCQ5/79-155      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF SQ 16
Q22909/84-157              --DRMGSPGS----CKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSG-------
Q22910/87-162              --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLHD-
A0A2H2IEG0/87-160          ---VNGSPTCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASV--------
A8XJD1/92-167              --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLHD-
A0A261CT28/92-167          --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLHD-
A0A2G5SRK0/92-167          --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLHD-
G0M7E4/92-167              --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLND-
E3LCQ4/92-167              --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLHD-
A0A1I7UAL0/92-168          --------TCVG--SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDLLNDD
A0A2G5SRF9/73-150          --PRASSPDRNSPMSKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQVKTWYQNRRTKWKRQATSG-------
A8XJD0/73-150              --PRASSPDRNSPMSKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQVKTWYQNRRTKWKRQATSG-------
A0A1I7UAL1/79-155          GTDRMGSPMSN---SKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQVKTWYQNRRTKWKRQATSG-------
G0M7E3/79-154              GTDRMGSPMSN---SKKSRKARTIFTDKQLQELETTFEKQKYLSVQDRMDLAHRMGLSDTQVKTWYQNRRTKWKRQATT--------
A0A261CSR2/79-155          GTDRMGSPMSN---SKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSG-------
A0A2H2IGP1/83-158          GTERMGSPTSN---SKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATT--------
E3LCQ5/79-155              GTDRMGSPMSN---SKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSG-------
#=GC scorecons             001212224542008996999999999999999989999999999999979999999699999999999999999996451111010
#=GC scorecons_70          ______________***_***********************************************************__________
#=GC scorecons_80          ______________***_*******************************_*******_*******************__________
#=GC scorecons_90          ______________***_*******************************_*******_*******************__________
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