# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000461
#=GF DE Sigma-54-dependent Fis family transcriptional regulator
#=GF AC 1.10.10.60/FF/000461
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 47.828
#=GS Q9KQ67/415-476      AC Q9KQ67
#=GS Q9KQ67/415-476      OS Vibrio cholerae O1 biovar El Tor str. N16961
#=GS Q9KQ67/415-476      DE Sigma-54 dependent response regulator
#=GS Q9KQ67/415-476      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS Q9KQ67/415-476      DR GO; GO:0000976; GO:0001216; GO:0032993; 
#=GS Q9I4N3/402-462      AC Q9I4N3
#=GS Q9I4N3/402-462      OS Pseudomonas aeruginosa PAO1
#=GS Q9I4N3/402-462      DE Two-component response regulator
#=GS Q9I4N3/402-462      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q9I4N3/402-462      DR GO; GO:0045785; GO:1900191; GO:2000155; 
#=GS A0A157VY95/402-462  AC A0A157VY95
#=GS A0A157VY95/402-462  OS Enterobacter cloacae
#=GS A0A157VY95/402-462  DE Two component Fis family sigma54-specific transcriptional regulator
#=GS A0A157VY95/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; 
#=GS A0A335YDJ3/402-462  AC A0A335YDJ3
#=GS A0A335YDJ3/402-462  OS Acinetobacter baumannii
#=GS A0A335YDJ3/402-462  DE Response regulator
#=GS A0A335YDJ3/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; 
#=GS D2YFM7/413-475      AC D2YFM7
#=GS D2YFM7/413-475      OS Vibrio mimicus VM603
#=GS D2YFM7/413-475      DE Acetoacetate metabolism regulatory protein atoC
#=GS D2YFM7/413-475      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio mimicus; 
#=GS W0H7K0/399-456      AC W0H7K0
#=GS W0H7K0/399-456      OS Pseudomonas cichorii JBC1
#=GS W0H7K0/399-456      DE Sigma-54 dependent DNA-binding response regulator FleR
#=GS W0H7K0/399-456      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas cichorii; 
#=GS A0A2V2TMJ7/402-462  AC A0A2V2TMJ7
#=GS A0A2V2TMJ7/402-462  OS Pseudomonas sp. RW410
#=GS A0A2V2TMJ7/402-462  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A2V2TMJ7/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. RW410; 
#=GS A0A448BPK2/402-462  AC A0A448BPK2
#=GS A0A448BPK2/402-462  OS Pseudomonas fluorescens
#=GS A0A448BPK2/402-462  DE Two-component response regulator
#=GS A0A448BPK2/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A1F0IYX2/402-462  AC A0A1F0IYX2
#=GS A0A1F0IYX2/402-462  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0IYX2/402-462  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A1F0IYX2/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A0X1KYJ0/415-476  AC A0A0X1KYJ0
#=GS A0A0X1KYJ0/415-476  OS Vibrio cholerae MO10
#=GS A0A0X1KYJ0/415-476  DE Flagellar regulatory protein C
#=GS A0A0X1KYJ0/415-476  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3PZU0/415-476  AC A0A0H3PZU0
#=GS A0A0H3PZU0/415-476  OS Vibrio cholerae B33
#=GS A0A0H3PZU0/415-476  DE Sigma-54 dependent response regulator
#=GS A0A0H3PZU0/415-476  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3AHP1/415-476  AC A0A0H3AHP1
#=GS A0A0H3AHP1/415-476  OS Vibrio cholerae O395
#=GS A0A0H3AHP1/415-476  DE Flagellar regulatory protein C
#=GS A0A0H3AHP1/415-476  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS C3LPE0/415-476      AC C3LPE0
#=GS C3LPE0/415-476      OS Vibrio cholerae M66-2
#=GS C3LPE0/415-476      DE Flagellar regulatory protein C
#=GS C3LPE0/415-476      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A246D9X3/415-476  AC A0A246D9X3
#=GS A0A246D9X3/415-476  OS Vibrio cholerae
#=GS A0A246D9X3/415-476  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A246D9X3/415-476  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0C7ADT6/402-462  AC A0A0C7ADT6
#=GS A0A0C7ADT6/402-462  OS Pseudomonas aeruginosa
#=GS A0A0C7ADT6/402-462  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A0C7ADT6/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A022P4P3/402-462  AC A0A022P4P3
#=GS A0A022P4P3/402-462  OS Pseudomonas aeruginosa PA103
#=GS A0A022P4P3/402-462  DE FleR
#=GS A0A022P4P3/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2Z839/402-462  AC A0A0H2Z839
#=GS A0A0H2Z839/402-462  OS Pseudomonas aeruginosa UCBPP-PA14
#=GS A0A0H2Z839/402-462  DE Two-component response regulator
#=GS A0A0H2Z839/402-462  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GF SQ 17
Q9KQ67/415-476              --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
Q9I4N3/402-462              IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A157VY95/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A335YDJ3/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
D2YFM7/413-475              -AGVPNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
W0H7K0/399-456              --PAAAAAESAGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRD----
A0A2V2TMJ7/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A448BPK2/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A1F0IYX2/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A0X1KYJ0/415-476          --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
A0A0H3PZU0/415-476          --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
A0A0H3AHP1/415-476          --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
C3LPE0/415-476              --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
A0A246D9X3/415-476          --GGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGID
A0A0C7ADT6/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A022P4P3/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
A0A0H2Z839/402-462          IPSPAAGQDASGALGDDLRRREFQVIIDTLRTERGRRKEAAERLGISPRTLRYKLAQMRDA---
#=GC scorecons              1154555555866996799569957969995546999995997999999999999969997111
#=GC scorecons_70           __________*__**_***_***_******___******_*********************___
#=GC scorecons_80           __________*__**__**__**__*_***____*****_**_*************_****___
#=GC scorecons_90           __________*__**__**__**__*_***____*****_**_*************_***____
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