# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000387
#=GF DE Replication termination factor 1
#=GF AC 1.10.10.60/FF/000387
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 84.703
#=GS Q12457/341-394      AC Q12457
#=GS Q12457/341-394      OS Saccharomyces cerevisiae S288C
#=GS Q12457/341-394      DE RNA polymerase I termination factor
#=GS Q12457/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q12457/341-394      DR GO; GO:0000183; GO:0003677; GO:0005730; GO:0006363; GO:0033553; GO:1900008; 
#=GS P21538/471-523      AC P21538
#=GS P21538/471-523      OS Saccharomyces cerevisiae S288C
#=GS P21538/471-523      DE DNA-binding protein REB1
#=GS P21538/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P21538/471-523      DR GO; GO:0001174; GO:0005654; GO:0006357; GO:0006363; GO:0006369; GO:0043565; 
#=GS Q9UUI6/249-302      AC Q9UUI6
#=GS Q9UUI6/249-302      OS Schizosaccharomyces pombe 972h-
#=GS Q9UUI6/249-302      DE Replication termination factor 1
#=GS Q9UUI6/249-302      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS Q9UUI6/249-302      DR GO; GO:0005634; GO:0071171; GO:1990943; 
#=GS E3K646/456-511      AC E3K646
#=GS E3K646/456-511      OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3K646/456-511      DE Uncharacterized protein
#=GS E3K646/456-511      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS J8Q9P0/342-395      AC J8Q9P0
#=GS J8Q9P0/342-395      OS Saccharomyces arboricola H-6
#=GS J8Q9P0/342-395      DE YDR026C
#=GS J8Q9P0/342-395      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS H0GSK1/343-396      AC H0GSK1
#=GS H0GSK1/343-396      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GSK1/343-396      DE YDR026C-like protein
#=GS H0GSK1/343-396      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS J5RT67/342-396      AC J5RT67
#=GS J5RT67/342-396      OS Saccharomyces kudriavzevii IFO 1802
#=GS J5RT67/342-396      DE YDR026C-like protein
#=GS J5RT67/342-396      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS A0A0L8VSR4/341-394  AC A0A0L8VSR4
#=GS A0A0L8VSR4/341-394  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VSR4/341-394  DE NSI1p RNA polymerase I termination factor
#=GS A0A0L8VSR4/341-394  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RMV1/338-391  AC A0A0L8RMV1
#=GS A0A0L8RMV1/338-391  OS Saccharomyces eubayanus
#=GS A0A0L8RMV1/338-391  DE NSI1-like protein
#=GS A0A0L8RMV1/338-391  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS C8Z4U6/341-394      AC C8Z4U6
#=GS C8Z4U6/341-394      OS Saccharomyces cerevisiae EC1118
#=GS C8Z4U6/341-394      DE EC1118_1D0_2685p
#=GS C8Z4U6/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WAD2/341-394      AC G2WAD2
#=GS G2WAD2/341-394      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WAD2/341-394      DE K7_Ydr026cp
#=GS G2WAD2/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GLX1/341-394      AC C7GLX1
#=GS C7GLX1/341-394      OS Saccharomyces cerevisiae JAY291
#=GS C7GLX1/341-394      DE YDR026C-like protein
#=GS C7GLX1/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZXY9/341-394      AC A6ZXY9
#=GS A6ZXY9/341-394      OS Saccharomyces cerevisiae YJM789
#=GS A6ZXY9/341-394      DE Conserved protein
#=GS A6ZXY9/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1PAB8/341-394      AC N1PAB8
#=GS N1PAB8/341-394      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1PAB8/341-394      DE Uncharacterized protein
#=GS N1PAB8/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LGN9/341-394      AC B3LGN9
#=GS B3LGN9/341-394      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LGN9/341-394      DE Uncharacterized protein
#=GS B3LGN9/341-394      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GCC2/471-523      AC H0GCC2
#=GS H0GCC2/471-523      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GCC2/471-523      DE Reb1p
#=GS H0GCC2/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8RM00/482-534  AC A0A0L8RM00
#=GS A0A0L8RM00/482-534  OS Saccharomyces eubayanus
#=GS A0A0L8RM00/482-534  DE REB1-like protein
#=GS A0A0L8RM00/482-534  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS G2W955/471-523      AC G2W955
#=GS G2W955/471-523      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2W955/471-523      DE K7_Reb1p
#=GS G2W955/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GST6/471-523      AC C7GST6
#=GS C7GST6/471-523      OS Saccharomyces cerevisiae JAY291
#=GS C7GST6/471-523      DE Reb1p
#=GS C7GST6/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P8A1/471-523      AC N1P8A1
#=GS N1P8A1/471-523      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P8A1/471-523      DE Reb1p
#=GS N1P8A1/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LN99/471-523      AC B3LN99
#=GS B3LN99/471-523      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LN99/471-523      DE RNA polymerase I enhancer binding protein
#=GS B3LN99/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS J5PDV1/470-522      AC J5PDV1
#=GS J5PDV1/470-522      OS Saccharomyces kudriavzevii IFO 1802
#=GS J5PDV1/470-522      DE REB1-like protein
#=GS J5PDV1/470-522      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS A6ZKZ3/471-523      AC A6ZKZ3
#=GS A6ZKZ3/471-523      OS Saccharomyces cerevisiae YJM789
#=GS A6ZKZ3/471-523      DE RNA polymerase I enhancer binding protein
#=GS A6ZKZ3/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS D3UEE4/471-523      AC D3UEE4
#=GS D3UEE4/471-523      OS Saccharomyces cerevisiae EC1118
#=GS D3UEE4/471-523      DE Reb1p
#=GS D3UEE4/471-523      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VVE1/471-523  AC A0A0L8VVE1
#=GS A0A0L8VVE1/471-523  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VVE1/471-523  DE REB1p RNA polymerase I enhancer binding protein
#=GS A0A0L8VVE1/471-523  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GF SQ 25
Q12457/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
P21538/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
Q9UUI6/249-302              KYNPFKKKCKWTIEDEAELKKLVEKHGTSWSLIGKLSNRLPMHCRDHWRDYIQP----
E3K646/456-511              AYDPQAKLGRWTAEEEAALKDAHKKHGQSWTLISEQVGRPADDCRDRWRNHTCVKD--
J8Q9P0/342-395              ---IFEQRGKWAPEEDQELARLCLEKEGHWTEVGRLLGRMPEDCRDRWRNYMKCGSK-
H0GSK1/343-396              ----FEQRGKWTPEEDQELARLCMEKEGHWTEVGKFLGRMPEDCRDRWRNYMKCGSKR
J5RT67/342-396              --HIFEQRGKWTPEEDQELARLCMEKEGHWTEVGKFLGRMPEDCRDRWRNYMKCGSK-
A0A0L8VSR4/341-394          ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
A0A0L8RMV1/338-391          --HIFEQRGKWTPEEDQELARLCLEKEGHWTEVGNLLGRMPEDCRDRWRNYMKCGS--
C8Z4U6/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
G2WAD2/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
C7GLX1/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
A6ZXY9/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
N1PAB8/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
B3LGN9/341-394              ---IFEQRGKWTPEEDQELARLCLEKEGHWTEVGKLLGRMPEDCRDRWRNYMKCGSK-
H0GCC2/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
A0A0L8RM00/482-534          ----FEQRGKWTSEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGTN-
G2W955/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
C7GST6/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
N1P8A1/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
B3LN99/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
J5PDV1/470-522              ----FEQRGKWTSEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGTN-
A6ZKZ3/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
D3UEE4/471-523              ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
A0A0L8VVE1/471-523          ---IFEQRGKWTAEEEQELAKLCAEKEGQWAEIGKTLGRMPEDCRDRWRNYVKCGT--
#=GC scorecons              0004666678984987679667536666595577746796767999799785655310
#=GC scorecons_70           ____*_*_****_***_**__*__***__*__***__**************_______
#=GC scorecons_80           ________****_**__**__*_______*___*___**_*_*********_______
#=GC scorecons_90           __________**_**___*__________*________*____***_**_________
//