# STOCKHOLM 1.0
#=GF ID 1.10.10.60/FF/000383
#=GF DE box A-binding factor
#=GF AC 1.10.10.60/FF/000383
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 49.823
#=GS Q5U1D9/389-456      AC Q5U1D9
#=GS Q5U1D9/389-456      OS Drosophila melanogaster
#=GS Q5U1D9/389-456      DE SD09647p
#=GS Q5U1D9/389-456      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q5U1D9/389-456      DR GO; GO:0000122; GO:0001748; GO:0003700; GO:0005634; GO:2000179; 
#=GS Q9W4B2/389-456      AC Q9W4B2
#=GS Q9W4B2/389-456      OS Drosophila melanogaster
#=GS Q9W4B2/389-456      DE FI01127p
#=GS Q9W4B2/389-456      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9W4B2/389-456      DR GO; GO:0000122; GO:0001748; GO:0003700; GO:0005634; GO:2000179; 
#=GS Q8T990/277-344      AC Q8T990
#=GS Q8T990/277-344      OS Drosophila melanogaster
#=GS Q8T990/277-344      DE SD01032p
#=GS Q8T990/277-344      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8T990/277-344      DR GO; GO:0000122; GO:0001748; GO:0003700; GO:0005634; GO:2000179; 
#=GS Q7PFE9/29-82        AC Q7PFE9
#=GS Q7PFE9/29-82        OS Anopheles gambiae
#=GS Q7PFE9/29-82        DE AGAP011143-PA
#=GS Q7PFE9/29-82        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS V4AG29/1-56         AC V4AG29
#=GS V4AG29/1-56         OS Lottia gigantea
#=GS V4AG29/1-56         DE Uncharacterized protein
#=GS V4AG29/1-56         DR ORG; Eukaryota; Metazoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia; Lottia gigantea; 
#=GS T1EKW6/1-57         AC T1EKW6
#=GS T1EKW6/1-57         OS Helobdella robusta
#=GS T1EKW6/1-57         DE Uncharacterized protein
#=GS T1EKW6/1-57         DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS A0A212EWR5/55-109   AC A0A212EWR5
#=GS A0A212EWR5/55-109   OS Danaus plexippus plexippus
#=GS A0A212EWR5/55-109   DE Uncharacterized protein
#=GS A0A212EWR5/55-109   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Amphiesmenoptera; Lepidoptera; Glossata; Neolepidoptera; Heteroneura; Papilionoidea; Nymphalidae; Danainae; Danaini; Danaina; Danaus; Danaus; Danaus plexippus; Danaus plexippus plexippus; 
#=GS A0A0L0CAX5/355-423  AC A0A0L0CAX5
#=GS A0A0L0CAX5/355-423  OS Lucilia cuprina
#=GS A0A0L0CAX5/355-423  DE Uncharacterized protein
#=GS A0A0L0CAX5/355-423  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia; Lucilia cuprina; 
#=GS A0A1I8M5H0/167-235  AC A0A1I8M5H0
#=GS A0A1I8M5H0/167-235  OS Musca domestica
#=GS A0A1I8M5H0/167-235  DE Uncharacterized protein
#=GS A0A1I8M5H0/167-235  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Muscini; Musca; Musca; Musca domestica; 
#=GS A0A0K8WFQ5/38-106   AC A0A0K8WFQ5
#=GS A0A0K8WFQ5/38-106   OS Bactrocera latifrons
#=GS A0A0K8WFQ5/38-106   DE Visual system homeobox 2
#=GS A0A0K8WFQ5/38-106   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Dacini; Bactrocera; Bactrocera; Bactrocera latifrons; 
#=GS A0A1A9WT03/463-531  AC A0A1A9WT03
#=GS A0A1A9WT03/463-531  OS Glossina brevipalpis
#=GS A0A1A9WT03/463-531  DE Uncharacterized protein
#=GS A0A1A9WT03/463-531  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Hippoboscoidea; Glossinidae; Glossina; Austenina; Glossina brevipalpis; 
#=GS Q17CT9/50-104       AC Q17CT9
#=GS Q17CT9/50-104       OS Aedes aegypti
#=GS Q17CT9/50-104       DE AAEL004432-PA
#=GS Q17CT9/50-104       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia; Aedes aegypti; 
#=GS H9JGB9/23-78        AC H9JGB9
#=GS H9JGB9/23-78        OS Bombyx mori
#=GS H9JGB9/23-78        DE Uncharacterized protein
#=GS H9JGB9/23-78        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Amphiesmenoptera; Lepidoptera; Glossata; Neolepidoptera; Heteroneura; Bombycoidea; Bombycidae; Bombycinae; Bombyx; Bombyx mori; 
#=GS W8C981/363-431      AC W8C981
#=GS W8C981/363-431      OS Ceratitis capitata
#=GS W8C981/363-431      DE Visual system homeobox 2
#=GS W8C981/363-431      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Dacinae; Ceratitidini; Ceratitis; Ceratitis; Ceratitis capitata; 
#=GS A0A1I8Q8S5/359-427  AC A0A1I8Q8S5
#=GS A0A1I8Q8S5/359-427  OS Stomoxys calcitrans
#=GS A0A1I8Q8S5/359-427  DE Uncharacterized protein
#=GS A0A1I8Q8S5/359-427  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Stomoxyini; Stomoxys; Stomoxys calcitrans; 
#=GS A0A182ITR3/28-83    AC A0A182ITR3
#=GS A0A182ITR3/28-83    OS Anopheles atroparvus
#=GS A0A182ITR3/28-83    DE Uncharacterized protein
#=GS A0A182ITR3/28-83    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Angusticorn; Anopheles; maculipennis group; Anopheles atroparvus; 
#=GS B4M799/367-434      AC B4M799
#=GS B4M799/367-434      OS Drosophila virilis
#=GS B4M799/367-434      DE Uncharacterized protein
#=GS B4M799/367-434      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A0M3QYZ9/395-462  AC A0A0M3QYZ9
#=GS A0A0M3QYZ9/395-462  OS Drosophila busckii
#=GS A0A0M3QYZ9/395-462  DE Vsx1
#=GS A0A0M3QYZ9/395-462  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B3MR07/396-463      AC B3MR07
#=GS B3MR07/396-463      OS Drosophila ananassae
#=GS B3MR07/396-463      DE Uncharacterized protein
#=GS B3MR07/396-463      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3NV55/394-461      AC B3NV55
#=GS B3NV55/394-461      OS Drosophila erecta
#=GS B3NV55/394-461      DE Uncharacterized protein
#=GS B3NV55/394-461      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A3B0JYZ0/387-454  AC A0A3B0JYZ0
#=GS A0A3B0JYZ0/387-454  OS Drosophila guanche
#=GS A0A3B0JYZ0/387-454  DE Blast:Visual system homeobox 2
#=GS A0A3B0JYZ0/387-454  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A1W4VEM4/389-456  AC A0A1W4VEM4
#=GS A0A1W4VEM4/389-456  OS Drosophila ficusphila
#=GS A0A1W4VEM4/389-456  DE box A-binding factor
#=GS A0A1W4VEM4/389-456  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4L5R1/378-445      AC B4L5R1
#=GS B4L5R1/378-445      OS Drosophila mojavensis
#=GS B4L5R1/378-445      DE Uncharacterized protein
#=GS B4L5R1/378-445      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4ND84/425-492      AC B4ND84
#=GS B4ND84/425-492      OS Drosophila willistoni
#=GS B4ND84/425-492      DE Uncharacterized protein
#=GS B4ND84/425-492      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4PZP1/386-453      AC B4PZP1
#=GS B4PZP1/386-453      OS Drosophila yakuba
#=GS B4PZP1/386-453      DE Uncharacterized protein
#=GS B4PZP1/386-453      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B5DLL8/394-461      AC B5DLL8
#=GS B5DLL8/394-461      OS Drosophila pseudoobscura pseudoobscura
#=GS B5DLL8/394-461      DE Uncharacterized protein
#=GS B5DLL8/394-461      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GF SQ 26
Q5U1D9/389-456              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
Q9W4B2/389-456              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
Q8T990/277-344              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
Q7PFE9/29-82                -GKKKKKKRRHSRTIFTSYQLDELEKAFKEAHYPDVYAREMLSLKTDLPEDRIQL---------------
V4AG29/1-56                 ------------RTIFTSYQLEELEKAFKDAHYPDVYAREVLAMKTDLPEDRIQVWFQNRRAKWRKTE--
T1EKW6/1-57                 -----------YRTIFTSYQLEELEKTFKEAHYPDVYQREVLSLKTDLPEDRIQVWFQNRRAKWRKTE--
A0A212EWR5/55-109           -GKKKKKKRRHSRTIFTSYQLDELEKAFKDAHYPDVYAREMLSLKTDLPEDRIQGQ--------------
A0A0L0CAX5/355-423          -GSKKKNKRRHGRTIFTSNQLEELEKAFKDAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
A0A1I8M5H0/167-235          -SGKKKNKRRHGRTIFTSNQLEELEKAFKDAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
A0A0K8WFQ5/38-106           -SSKKKNKRRHGRTIFTSNQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
A0A1A9WT03/463-531          -SGKKKNKRRHGRTIFTSNQLEELEKAFKDAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
Q17CT9/50-104               -GKKKKKKRRHSRTIFTSYQLDELEKAFKEAHYPDVYAREMLSLKTDLPEDRIQVS--------------
H9JGB9/23-78                NGKKKKKKRRH-RTIFTSYQLDELEKAFKDAHYPDVYAREMLSLKTDLPEDRIQVSE-------------
W8C981/363-431              -SSKKKNKRRHGRTIFTSNQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
A0A1I8Q8S5/359-427          -SSKKKNKRRHGRTIFTSNQLEELEKAFKDAHYPDVSARELLSMKTGLAEDRIQVWFQNRRAKWRKTEKC
A0A182ITR3/28-83            -GKKKKKKRRHSRTIFTSYQLDELEKAFKEAHYPDVYAREMLSLKTDLPEDRIQIEL-------------
B4M799/367-434              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
A0A0M3QYZ9/395-462          --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B3MR07/396-463              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B3NV55/394-461              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
A0A3B0JYZ0/387-454          --GKKKNKRRHGRTIFTSSQLEELEKAFKDAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
A0A1W4VEM4/389-456          --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B4L5R1/378-445              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B4ND84/425-492              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B4PZP1/386-453              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
B5DLL8/394-461              --GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKTEKC
#=GC scorecons              0136664666639999994997999989979999995899698699696999996433333333333322
#=GC scorecons_70           ___***_****_******_*****************_***_*****_*_******_______________
#=GC scorecons_80           ____________******_*****************_***_**_**_*_*****________________
#=GC scorecons_90           ____________******_**_*******_******__**_**_**_*_*****________________
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