# STOCKHOLM 1.0 #=GF ID 1.10.10.60/FF/000378 #=GF DE Notochord homeobox #=GF AC 1.10.10.60/FF/000378 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 64.214 #=GS Q9VEA3/300-375 AC Q9VEA3 #=GS Q9VEA3/300-375 OS Drosophila melanogaster #=GS Q9VEA3/300-375 DE Uncharacterized protein #=GS Q9VEA3/300-375 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS D6WA19/111-202 AC D6WA19 #=GS D6WA19/111-202 OS Tribolium castaneum #=GS D6WA19/111-202 DE Homeobox protein not2-like Protein #=GS D6WA19/111-202 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; #=GS F5HMB7/495-583 AC F5HMB7 #=GS F5HMB7/495-583 OS Anopheles gambiae #=GS F5HMB7/495-583 DE AGAP013075-PA #=GS F5HMB7/495-583 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS F6X3H1/40-128 AC F6X3H1 #=GS F6X3H1/40-128 OS Ciona intestinalis #=GS F6X3H1/40-128 DE Uncharacterized protein #=GS F6X3H1/40-128 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS A0A3P9HB74/119-205 AC A0A3P9HB74 #=GS A0A3P9HB74/119-205 OS Oryzias latipes #=GS A0A3P9HB74/119-205 DE Notochord homeobox #=GS A0A3P9HB74/119-205 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS W5MSI6/148-229 AC W5MSI6 #=GS W5MSI6/148-229 OS Lepisosteus oculatus #=GS W5MSI6/148-229 DE Uncharacterized protein #=GS W5MSI6/148-229 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; #=GS A0A3Q1G416/117-199 AC A0A3Q1G416 #=GS A0A3Q1G416/117-199 OS Acanthochromis polyacanthus #=GS A0A3Q1G416/117-199 DE Uncharacterized protein #=GS A0A3Q1G416/117-199 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Pomacentridae; Acanthochromis; Acanthochromis polyacanthus; #=GS H2V7B8/129-211 AC H2V7B8 #=GS H2V7B8/129-211 OS Takifugu rubripes #=GS H2V7B8/129-211 DE Uncharacterized protein #=GS H2V7B8/129-211 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Takifugu; Takifugu rubripes; #=GS A0A0M5JD13/254-329 AC A0A0M5JD13 #=GS A0A0M5JD13/254-329 OS Drosophila busckii #=GS A0A0M5JD13/254-329 DE CG18599 #=GS A0A0M5JD13/254-329 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; #=GS A0A1W2W4V0/149-237 AC A0A1W2W4V0 #=GS A0A1W2W4V0/149-237 OS Ciona intestinalis #=GS A0A1W2W4V0/149-237 DE homeobox protein not2 #=GS A0A1W2W4V0/149-237 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS Q4JF72/13-102 AC Q4JF72 #=GS Q4JF72/13-102 OS Ciona intestinalis #=GS Q4JF72/13-102 DE Homeobox transcription factor protein #=GS Q4JF72/13-102 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS A0A3B0KCE2/176-251 AC A0A3B0KCE2 #=GS A0A3B0KCE2/176-251 OS Drosophila guanche #=GS A0A3B0KCE2/176-251 DE Blast:Homeobox protein notochord #=GS A0A3B0KCE2/176-251 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS B4IB76/291-366 AC B4IB76 #=GS B4IB76/291-366 OS Drosophila sechellia #=GS B4IB76/291-366 DE GM15295 #=GS B4IB76/291-366 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS A0A3B0KFN7/217-292 AC A0A3B0KFN7 #=GS A0A3B0KFN7/217-292 OS Drosophila guanche #=GS A0A3B0KFN7/217-292 DE Blast:Homeobox protein notochord #=GS A0A3B0KFN7/217-292 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS A0A3B0K716/144-219 AC A0A3B0K716 #=GS A0A3B0K716/144-219 OS Drosophila guanche #=GS A0A3B0K716/144-219 DE Blast:Homeobox protein notochord #=GS A0A3B0K716/144-219 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS A0A1W4U944/296-371 AC A0A1W4U944 #=GS A0A1W4U944/296-371 OS Drosophila ficusphila #=GS A0A1W4U944/296-371 DE homeobox protein B-H2 #=GS A0A1W4U944/296-371 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS B4QUH0/292-367 AC B4QUH0 #=GS B4QUH0/292-367 OS Drosophila simulans #=GS B4QUH0/292-367 DE GD19222 #=GS B4QUH0/292-367 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS Q296W5/274-349 AC Q296W5 #=GS Q296W5/274-349 OS Drosophila pseudoobscura pseudoobscura #=GS Q296W5/274-349 DE Uncharacterized protein, isoform A #=GS Q296W5/274-349 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; #=GS A0A0R1E0F2/297-372 AC A0A0R1E0F2 #=GS A0A0R1E0F2/297-372 OS Drosophila yakuba #=GS A0A0R1E0F2/297-372 DE Uncharacterized protein, isoform B #=GS A0A0R1E0F2/297-372 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B3NZ83/285-360 AC B3NZ83 #=GS B3NZ83/285-360 OS Drosophila erecta #=GS B3NZ83/285-360 DE GG22815 #=GS B3NZ83/285-360 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4GEJ7/280-354 AC B4GEJ7 #=GS B4GEJ7/280-354 OS Drosophila persimilis #=GS B4GEJ7/280-354 DE GL21794 #=GS B4GEJ7/280-354 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; #=GS B4NG86/135-210 AC B4NG86 #=GS B4NG86/135-210 OS Drosophila willistoni #=GS B4NG86/135-210 DE Uncharacterized protein #=GS B4NG86/135-210 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; #=GS B4PL95/271-346 AC B4PL95 #=GS B4PL95/271-346 OS Drosophila yakuba #=GS B4PL95/271-346 DE Uncharacterized protein, isoform A #=GS B4PL95/271-346 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS B3MTQ3/273-349 AC B3MTQ3 #=GS B3MTQ3/273-349 OS Drosophila ananassae #=GS B3MTQ3/273-349 DE Uncharacterized protein #=GS B3MTQ3/273-349 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; #=GS H2MVF7/118-200 AC H2MVF7 #=GS H2MVF7/118-200 OS Oryzias latipes #=GS H2MVF7/118-200 DE Uncharacterized protein #=GS H2MVF7/118-200 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS A0A3B3INM0/119-205 AC A0A3B3INM0 #=GS A0A3B3INM0/119-205 OS Oryzias latipes #=GS A0A3B3INM0/119-205 DE Uncharacterized protein #=GS A0A3B3INM0/119-205 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS A0A3P9LZU3/119-205 AC A0A3P9LZU3 #=GS A0A3P9LZU3/119-205 OS Oryzias latipes #=GS A0A3P9LZU3/119-205 DE Notochord homeobox #=GS A0A3P9LZU3/119-205 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GF SQ 27 Q9VEA3/300-375 -------------QREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- D6WA19/111-202 SVGHGCPQRQAVRGLKHLSSAVIQSKKSCKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLQLTEAQVKVWFQNRRIKWRKHHLE- F5HMB7/495-583 KV--QCSMPQSRRYLSK-KSAMSSSAASLKSKRVRTIFTPEQLERLEAEFERQQYMVGPERLYLAHTLQLTEAQVKVWFQNRRIKWRKHHLE- F6X3H1/40-128 -T--SSPLATNDVTARG-NDVTHTSPPLVDKKRMRTIFTSDQLEKLEDEFTRQHYMVGSERYFLAKRLNLSETQVKVWFQNRRIKWRKRRHQV A0A3P9HB74/119-205 -----AFYAQAAMSKVN-AGLQSFKAKSGKSKRMRTSFTSEQLSRLEKEFARQQYMVGSERFLLASALNLTEAQVKVWFQNRRIKWRKQSLEQ W5MSI6/148-229 -------YTQADPHLSK-NSVPSFKHKPGKSKRMRTIFTNLQLSRLEKEFARQQYMVGSERFVLASSLQLTEAQVKVWFQNRRIKWRKQT--- A0A3Q1G416/117-199 ------FYAQASVSKVN-AGLHSFKTKGGKSKRMRTSFTSEQLSRLEKEFARQQYMVGSERFLLASSLQLTEAQVKVWFQNRRIKWRKQS--- H2V7B8/129-211 ----GAFYAQ-----VN-AGMHSFKTKGGKSKRIRTSFTSEQLSRLEKEFARQQYMVGSERFLLASALQLSEAQVKVWFQNRRIKWRKQSLEQ A0A0M5JD13/254-329 -------------QRDK-LKSESHKKNALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- A0A1W2W4V0/149-237 -T--SSPLATNDVTARG-NDVTHTSPPLVDKKRMRTIFTSDQLEKLEDEFTRQHYMVGSERYFLAKRLNLSETQVKVWFQNRRIKWRKRRHQV Q4JF72/13-102 FT--SSPLATNDVTARG-NDVTHTSPPLVDKKRMRTIFTSDQLEKLEDEFTRQHYMVGSERYFLAKRLNLSETQVKVWFQNRRIKWRKRRHQV A0A3B0KCE2/176-251 -------------QREK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B4IB76/291-366 -------------QREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- A0A3B0KFN7/217-292 -------------QREK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- A0A3B0K716/144-219 -------------QREK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- A0A1W4U944/296-371 -------------QREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B4QUH0/292-367 -------------QREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- Q296W5/274-349 -------------QREK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- A0A0R1E0F2/297-372 -------------QREK-LKSESHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B3NZ83/285-360 -------------QREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B4GEJ7/280-354 --------------REK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B4NG86/135-210 -------------QREK-LKSDSHKKSSLKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B4PL95/271-346 -------------QREK-LKSESHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- B3MTQ3/273-349 ------------FQREK-LKSDSHKKSALKNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKWRKHH--- H2MVF7/118-200 ----GAFYAQ-----VN-AGLQSFKAKSGKSKRMRTSFTSEQLSRLEKEFARQQYMVGSERFLLASALNLTEAQVKVWFQNRRIKWRKQSLEQ A0A3B3INM0/119-205 -----AFYAQAAMSKVN-AGLQSFKAKSGKSKRMRTSFTSEQLSRLEKEFARQQYMVGSERFLLASALNLTEAQVKVWFQNRRIKWRKQSLEQ A0A3P9LZU3/119-205 -----AFYAQAAMSKVN-AGLQSFKAKSGKSKRMRTSFTSEQLSRLEKEFARQQYMVGSERFLLASALNLTEAQVKVWFQNRRIKWRKQSLEQ #=GC scorecons 000001112210133350444364644447599699699579954994994997999969955994595979799999999999999964110 #=GC scorecons_70 ______________________*_*____*_*****_**_***__**_**_*******_**__**__*_*******************_____ #=GC scorecons_80 _____________________________*_**_**_**__**__**_**_*******_**__**__*_*_*****************_____ #=GC scorecons_90 _______________________________**_**_**__**__**_**_**_****_**__**__*_*_*_***************_____ //