# STOCKHOLM 1.0
#=GF ID 1.10.10.540/FF/000005
#=GF DE Related to RAD23-nucleotide excision repair protein (Ubiquitin-like protein)
#=GF AC 1.10.10.540/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.623
#=GS A0A0D1CA05/334-384  AC A0A0D1CA05
#=GS A0A0D1CA05/334-384  OS Ustilago maydis 521
#=GS A0A0D1CA05/334-384  DE Uncharacterized protein
#=GS A0A0D1CA05/334-384  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS K7M8N8/92-143       AC K7M8N8
#=GS K7M8N8/92-143       OS Glycine max
#=GS K7M8N8/92-143       DE Uncharacterized protein
#=GS K7M8N8/92-143       DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0CBZ8/199-255      AC A0CBZ8
#=GS A0CBZ8/199-255      OS Paramecium tetraurelia
#=GS A0CBZ8/199-255      DE Uncharacterized protein
#=GS A0CBZ8/199-255      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS E6ZYX2/320-370      AC E6ZYX2
#=GS E6ZYX2/320-370      OS Sporisorium reilianum SRZ2
#=GS E6ZYX2/320-370      DE Related to RAD23-nucleotide excision repair protein (Ubiquitin-like protein)
#=GS E6ZYX2/320-370      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS R9NWW0/318-368      AC R9NWW0
#=GS R9NWW0/318-368      OS Pseudozyma hubeiensis SY62
#=GS R9NWW0/318-368      DE Ubiquitin
#=GS R9NWW0/318-368      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS A0A061HA94/247-298  AC A0A061HA94
#=GS A0A061HA94/247-298  OS Anthracocystis flocculosa PF-1
#=GS A0A061HA94/247-298  DE Uncharacterized protein
#=GS A0A061HA94/247-298  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Anthracocystis; Anthracocystis flocculosa; 
#=GS A0A081CB69/309-359  AC A0A081CB69
#=GS A0A081CB69/309-359  OS Moesziomyces antarcticus
#=GS A0A081CB69/309-359  DE UV excision repair protein Rad23
#=GS A0A081CB69/309-359  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Moesziomyces; Moesziomyces antarcticus; 
#=GS A0A077R2E8/199-248  AC A0A077R2E8
#=GS A0A077R2E8/199-248  OS Melanopsichium pennsylvanicum 4
#=GS A0A077R2E8/199-248  DE Related to RAD23-nucleotide excision repair protein (Ubiquitin-like protein)
#=GS A0A077R2E8/199-248  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; 
#=GS I2FRZ8/309-359      AC I2FRZ8
#=GS I2FRZ8/309-359      OS Ustilago hordei Uh4857-4
#=GS I2FRZ8/309-359      DE Related to RAD23-nucleotide excision repair protein (Ubiquitin-like protein)
#=GS I2FRZ8/309-359      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS A0A1K0GNY4/316-366  AC A0A1K0GNY4
#=GS A0A1K0GNY4/316-366  OS Ustilago bromivora
#=GS A0A1K0GNY4/316-366  DE Related to RAD23-nucleotide excision repair protein (Ubiquitin-like protein)
#=GS A0A1K0GNY4/316-366  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago bromivora; 
#=GS A0CI08/182-230      AC A0CI08
#=GS A0CI08/182-230      OS Paramecium tetraurelia
#=GS A0CI08/182-230      DE Uncharacterized protein
#=GS A0CI08/182-230      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0DWV1/183-231      AC A0DWV1
#=GS A0DWV1/183-231      OS Paramecium tetraurelia
#=GS A0DWV1/183-231      DE Uncharacterized protein
#=GS A0DWV1/183-231      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 12
A0A0D1CA05/334-384          --NPAMLAQLQQLVQQNPAALQ----PLVHAIAQSNPQLAEAMNHDPQGVLALLAGG--
K7M8N8/92-143               ---VSGFQALRSMVQSNPQILQ----PVLQELGKQNLSLSRLIQEHHGEFLQLINDPVE
A0CBZ8/199-255              VGQPNQIQQLRQLYQQNPQAVLQLLPQLLQQIQQTNPELHAQVSQNPEMLLQMLMGA--
E6ZYX2/320-370              --NPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNHDPQGVLALLAGG--
R9NWW0/318-368              --NPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNNDPQGVLSLLAGG--
A0A061HA94/247-298          -GNPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEALNQDPQGVLSLLAGG--
A0A081CB69/309-359          --NPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNHDPQGVLSLLAGG--
A0A077R2E8/199-248          ---PAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNQDPQGVLSLLAGG--
I2FRZ8/309-359              --NPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNHDPQGVLSLLAGG--
A0A1K0GNY4/316-366          --NPAMLAQLQQLVQQNPAALQ----PLVQAIAQSNPQLAEAMNHDPQGVLSLLAGG--
A0CI08/182-230              ----NILQLLREQFMQNPQAVL----QSIQQLQQTNPQLYQQIQQNPETLIQLLMGA--
A0DWV1/183-231              ----NALQQLREQFIQNPEAIL----QLLPQLQQTNPQLYQQIQQNPEALVQLILGG--
#=GC scorecons              00135365596555579947650000565746474976934454557545647647500
#=GC scorecons_70           ______*__**____***_*_________*_*_*_**_*_______*___*_**_*___
#=GC scorecons_80           _________*______**_*_____________*_**_*_______*_____*__*___
#=GC scorecons_90           _________*______**_________________*__*____________________
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