# STOCKHOLM 1.0 #=GF ID 1.10.10.440/FF/000037 #=GF DE Pre-mRNA-processing factor 40 #=GF AC 1.10.10.440/FF/000037 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 89.767 #=GS Q9VQK5/217-284 AC Q9VQK5 #=GS Q9VQK5/217-284 OS Drosophila melanogaster #=GS Q9VQK5/217-284 DE LD24714p #=GS Q9VQK5/217-284 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q9VQK5/217-284 DR GO; GO:0000398; GO:0005685; GO:0071011; #=GS B3SC32/122-188 AC B3SC32 #=GS B3SC32/122-188 OS Trichoplax adhaerens #=GS B3SC32/122-188 DE Uncharacterized protein #=GS B3SC32/122-188 DR ORG; Eukaryota; Metazoa; Placozoa; Trichoplacidae; Trichoplax; Trichoplax adhaerens; #=GS Q7PNE5/244-311 AC Q7PNE5 #=GS Q7PNE5/244-311 OS Anopheles gambiae #=GS Q7PNE5/244-311 DE AGAP008263-PA #=GS Q7PNE5/244-311 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS A0A1S4GXR9/278-345 AC A0A1S4GXR9 #=GS A0A1S4GXR9/278-345 OS Anopheles gambiae #=GS A0A1S4GXR9/278-345 DE Pre-mRNA-processing factor 40 #=GS A0A1S4GXR9/278-345 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; #=GS A8IU79/349-414 AC A8IU79 #=GS A8IU79/349-414 OS Chlamydomonas reinhardtii #=GS A8IU79/349-414 DE WW domain protein #=GS A8IU79/349-414 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS A7SZQ2/5-70 AC A7SZQ2 #=GS A7SZQ2/5-70 OS Nematostella vectensis #=GS A7SZQ2/5-70 DE Predicted protein #=GS A7SZQ2/5-70 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS K7EDF9/141-205 AC K7EDF9 #=GS K7EDF9/141-205 OS Ornithorhynchus anatinus #=GS K7EDF9/141-205 DE Uncharacterized protein #=GS K7EDF9/141-205 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; #=GS A0A084W4U2/262-328 AC A0A084W4U2 #=GS A0A084W4U2/262-328 OS Anopheles sinensis #=GS A0A084W4U2/262-328 DE AGAP008263-PA-like protein #=GS A0A084W4U2/262-328 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Anopheles; Laticorn; Myzorhynchus; hyrcanus group; Anopheles sinensis; #=GS W5JFM9/284-350 AC W5JFM9 #=GS W5JFM9/284-350 OS Anopheles darlingi #=GS W5JFM9/284-350 DE U1 small nuclear ribonucleoprotein #=GS W5JFM9/284-350 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Nyssorhynchus; darlingi group; Anopheles darlingi; #=GS A0A182Y3H6/266-332 AC A0A182Y3H6 #=GS A0A182Y3H6/266-332 OS Anopheles stephensi #=GS A0A182Y3H6/266-332 DE Uncharacterized protein #=GS A0A182Y3H6/266-332 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles stephensi; #=GS A0A182NU18/262-328 AC A0A182NU18 #=GS A0A182NU18/262-328 OS Anopheles dirus #=GS A0A182NU18/262-328 DE Uncharacterized protein #=GS A0A182NU18/262-328 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; leucosphyrus group; leucosphyrus subgroup; Anopheles dirus; #=GS A0A182UIZ9/277-344 AC A0A182UIZ9 #=GS A0A182UIZ9/277-344 OS Anopheles melas #=GS A0A182UIZ9/277-344 DE Uncharacterized protein #=GS A0A182UIZ9/277-344 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles melas; #=GS A0A182TAN7/26-93 AC A0A182TAN7 #=GS A0A182TAN7/26-93 OS Anopheles maculatus #=GS A0A182TAN7/26-93 DE Uncharacterized protein #=GS A0A182TAN7/26-93 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles maculatus group; Anopheles maculatus; #=GS A0A182Q8P3/139-205 AC A0A182Q8P3 #=GS A0A182Q8P3/139-205 OS Anopheles farauti #=GS A0A182Q8P3/139-205 DE Uncharacterized protein #=GS A0A182Q8P3/139-205 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles farauti; #=GS B4I2U4/218-284 AC B4I2U4 #=GS B4I2U4/218-284 OS Drosophila sechellia #=GS B4I2U4/218-284 DE GM18387 #=GS B4I2U4/218-284 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS A0A1W4UTB1/224-289 AC A0A1W4UTB1 #=GS A0A1W4UTB1/224-289 OS Drosophila ficusphila #=GS A0A1W4UTB1/224-289 DE LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A #=GS A0A1W4UTB1/224-289 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS A0A0J9QVI7/218-284 AC A0A0J9QVI7 #=GS A0A0J9QVI7/218-284 OS Drosophila simulans #=GS A0A0J9QVI7/218-284 DE Uncharacterized protein #=GS A0A0J9QVI7/218-284 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GF SQ 17 Q9VQK5/217-284 DDKSESAVVFKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQK------ B3SC32/122-188 -TEVTEKIQYSNKDEAKQAFIGLLKEKQIPSYYTWDAVMKVIVSDPRYAALPKMNERKLAFNEYKTKK------ Q7PNE5/244-311 QTDEEPAMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A0A1S4GXR9/278-345 QTDEEPAMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A8IU79/349-414 --------NFATKEEAKDCFKELLAAVGCRSDWSWEQAMRHIVNDPRYSALKSLGERKQTFNEYVQARRNEERE A7SZQ2/5-70 --------IYATKDEAKQAFKELLKEKEVSPAASWDTAMRLIVNDPRYGALKKMNEKKQAFNEYKTQRANEEKV K7EDF9/141-205 ---------WNCKEKAKQAFKDLLREKGVTSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKE A0A084W4U2/262-328 -TEEEPVMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFSVFKKLSEKKQAFNAYKTQK------ W5JFM9/284-350 -PDEEPVMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A0A182Y3H6/266-332 QTDEEPAMEFKDKKEAIEAFKEFLKEKNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQ------- A0A182NU18/262-328 -TDEEPVMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A0A182UIZ9/277-344 QTDEEPAMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A0A182TAN7/26-93 QTDEEPAMEFKDKKEAIEAFKEFLKEKNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ A0A182Q8P3/139-205 -TDEEPVMEFKDKKEAIEAFKEFLKERNIPSSSSWEQCVKIIQKDPKFNVFKKLSEKKQAFNAYKTQK------ B4I2U4/218-284 -DKSDSAVVFKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQK------ A0A1W4UTB1/224-289 --------VFKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQKIKDERE A0A0J9QVI7/218-284 -DKSDSAVVFKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQK------ #=GC scorecons 02212222365595895659776966555684469765675845997746665759797699697666000000 #=GC scorecons_70 _________*__*_**_*_*****_*____*___***_**_*__****__**_*_*******_*****______ #=GC scorecons_80 ____________*_**___***_*______*___*____*_*__**_*_____*_*_**_**_**_________ #=GC scorecons_90 ____________*__*___*___*__________*______*__**_________*_*__**_*__________ //