# STOCKHOLM 1.0 #=GF ID 1.10.10.440/FF/000031 #=GF DE Pre-mRNA-processing protein 40C isoform C #=GF AC 1.10.10.440/FF/000031 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 77.107 #=GS Q9LT25/513-581 AC Q9LT25 #=GS Q9LT25/513-581 OS Arabidopsis thaliana #=GS Q9LT25/513-581 DE Pre-mRNA-processing protein 40C #=GS Q9LT25/513-581 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q337J6/752-816 AC Q337J6 #=GS Q337J6/752-816 OS Oryza sativa Japonica Group #=GS Q337J6/752-816 DE FF domain containing protein, expressed #=GS Q337J6/752-816 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS F6HFZ8/489-552 AC F6HFZ8 #=GS F6HFZ8/489-552 OS Vitis vinifera #=GS F6HFZ8/489-552 DE Uncharacterized protein #=GS F6HFZ8/489-552 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A0A1S3TJC3/628-696 AC A0A1S3TJC3 #=GS A0A1S3TJC3/628-696 OS Vigna radiata var. radiata #=GS A0A1S3TJC3/628-696 DE pre-mRNA-processing protein 40C isoform X1 #=GS A0A1S3TJC3/628-696 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; #=GS A0A067ECW3/517-579 AC A0A067ECW3 #=GS A0A067ECW3/517-579 OS Citrus sinensis #=GS A0A067ECW3/517-579 DE Uncharacterized protein #=GS A0A067ECW3/517-579 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus sinensis; #=GS B9HY19/621-683 AC B9HY19 #=GS B9HY19/621-683 OS Populus trichocarpa #=GS B9HY19/621-683 DE Uncharacterized protein #=GS B9HY19/621-683 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A0Q3Q686/729-793 AC A0A0Q3Q686 #=GS A0A0Q3Q686/729-793 OS Brachypodium distachyon #=GS A0A0Q3Q686/729-793 DE Uncharacterized protein #=GS A0A0Q3Q686/729-793 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS K7LP03/623-691 AC K7LP03 #=GS K7LP03/623-691 OS Glycine max #=GS K7LP03/623-691 DE Uncharacterized protein #=GS K7LP03/623-691 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A151TMU5/634-696 AC A0A151TMU5 #=GS A0A151TMU5/634-696 OS Cajanus cajan #=GS A0A151TMU5/634-696 DE Transcription elongation regulator 1 #=GS A0A151TMU5/634-696 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS A0A0S3SE65/628-696 AC A0A0S3SE65 #=GS A0A0S3SE65/628-696 OS Vigna angularis var. angularis #=GS A0A0S3SE65/628-696 DE Uncharacterized protein #=GS A0A0S3SE65/628-696 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; #=GS A0A0L9V8R5/628-696 AC A0A0L9V8R5 #=GS A0A0L9V8R5/628-696 OS Vigna angularis #=GS A0A0L9V8R5/628-696 DE Uncharacterized protein #=GS A0A0L9V8R5/628-696 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; #=GS A0A445HZY6/623-691 AC A0A445HZY6 #=GS A0A445HZY6/623-691 OS Glycine soja #=GS A0A445HZY6/623-691 DE Pre-mRNA-processing protein 40C isoform C #=GS A0A445HZY6/623-691 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A0D9XKT9/741-805 AC A0A0D9XKT9 #=GS A0A0D9XKT9/741-805 OS Leersia perrieri #=GS A0A0D9XKT9/741-805 DE Uncharacterized protein #=GS A0A0D9XKT9/741-805 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0E0R0J8/723-785 AC A0A0E0R0J8 #=GS A0A0E0R0J8/723-785 OS Oryza rufipogon #=GS A0A0E0R0J8/723-785 DE Uncharacterized protein #=GS A0A0E0R0J8/723-785 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0M8Y7/754-816 AC A0A0E0M8Y7 #=GS A0A0E0M8Y7/754-816 OS Oryza punctata #=GS A0A0E0M8Y7/754-816 DE Uncharacterized protein #=GS A0A0E0M8Y7/754-816 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0D3HEW4/754-816 AC A0A0D3HEW4 #=GS A0A0D3HEW4/754-816 OS Oryza barthii #=GS A0A0D3HEW4/754-816 DE Uncharacterized protein #=GS A0A0D3HEW4/754-816 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0BBX0/754-816 AC A0A0E0BBX0 #=GS A0A0E0BBX0/754-816 OS Oryza glumipatula #=GS A0A0E0BBX0/754-816 DE Uncharacterized protein #=GS A0A0E0BBX0/754-816 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0Q3IA53/558-623 AC A0A0Q3IA53 #=GS A0A0Q3IA53/558-623 OS Brachypodium distachyon #=GS A0A0Q3IA53/558-623 DE Uncharacterized protein #=GS A0A0Q3IA53/558-623 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS I1I4V3/715-779 AC I1I4V3 #=GS I1I4V3/715-779 OS Brachypodium distachyon #=GS I1I4V3/715-779 DE Uncharacterized protein #=GS I1I4V3/715-779 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A0D3HEW5/721-783 AC A0A0D3HEW5 #=GS A0A0D3HEW5/721-783 OS Oryza barthii #=GS A0A0D3HEW5/721-783 DE Uncharacterized protein #=GS A0A0D3HEW5/721-783 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0BBW9/723-785 AC A0A0E0BBW9 #=GS A0A0E0BBW9/723-785 OS Oryza glumipatula #=GS A0A0E0BBW9/723-785 DE Uncharacterized protein #=GS A0A0E0BBW9/723-785 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0BBX1/705-767 AC A0A0E0BBX1 #=GS A0A0E0BBX1/705-767 OS Oryza glumipatula #=GS A0A0E0BBX1/705-767 DE Uncharacterized protein #=GS A0A0E0BBX1/705-767 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0R0J9/754-816 AC A0A0E0R0J9 #=GS A0A0E0R0J9/754-816 OS Oryza rufipogon #=GS A0A0E0R0J9/754-816 DE Uncharacterized protein #=GS A0A0E0R0J9/754-816 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D9XKU0/710-774 AC A0A0D9XKU0 #=GS A0A0D9XKU0/710-774 OS Leersia perrieri #=GS A0A0D9XKU0/710-774 DE Uncharacterized protein #=GS A0A0D9XKU0/710-774 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0R0HSA7/623-691 AC A0A0R0HSA7 #=GS A0A0R0HSA7/623-691 OS Glycine max #=GS A0A0R0HSA7/623-691 DE Uncharacterized protein #=GS A0A0R0HSA7/623-691 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS I1LPK7/585-653 AC I1LPK7 #=GS I1LPK7/585-653 OS Glycine max #=GS I1LPK7/585-653 DE Uncharacterized protein #=GS I1LPK7/585-653 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS K7LP01/640-702 AC K7LP01 #=GS K7LP01/640-702 OS Glycine max #=GS K7LP01/640-702 DE Uncharacterized protein #=GS K7LP01/640-702 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 27 Q9LT25/513-581 EERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYRAFKKKWGNDLRFEAIERKEREGLLNERVLSLKRS- Q337J6/752-816 ----EKRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEEK- F6HFZ8/489-552 -----KRAAQRAAIEGFKQLLEEASEDIDHKTEYQTFRKKWGDDPRFEALDRKDRELLLNERVLPLKRA- A0A1S3TJC3/628-696 EERKEKRAAQKAAIEGYKQLLDEASEDINYNTDYQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKA- A0A067ECW3/517-579 -----KRAAQKAAIEGFKQLLEEVSEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKR-- B9HY19/621-683 ------RAAQKAAVEGFKQLLEEASEDIDHNTDYQTFRKKWGNDPRFEALDRKDREHLLNERIHLLKKA- A0A0Q3Q686/729-793 ----EKRAAQKAAVEAYKQLLEEASEDIDPKTGYQEFKRKRGTDPRFEGLDRKEREALFKEKVRAIEEK- K7LP03/623-691 EERKEKRAALKAAIEGFKRLLDEASEDINYNTDYQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKKA- A0A151TMU5/634-696 -----KRAAQRAAIEGFKQLLDEALEDINHNTDYQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKK-- A0A0S3SE65/628-696 EERKEKRAAQKAAIEGFKQLLDEALEDINYNTDYQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKA- A0A0L9V8R5/628-696 EERKEKRAAQKAAIEGFKQLLDEALEDINYNTDYQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKA- A0A445HZY6/623-691 EERKEKRAAQKAAIEGFKRLLDEASEDINYNTDYQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKKA- A0A0D9XKT9/741-805 ----EKKAAQRAAVEAYKQLLEEVSEDINSNKDYQEFKRKWGTDPRFEALDRKEREALFNEKVKSIEEK- A0A0E0R0J8/723-785 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0E0M8Y7/754-816 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0D3HEW4/754-816 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0E0BBX0/754-816 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0Q3IA53/558-623 ----EKRAAQKAAVEAYKQLLEEASEDIDPKTGYQEFKRKRGTDPRFEGLDRKEREALFKEKVRAIEEKV I1I4V3/715-779 ----EKRAAQKAAVEAYKQLLEEASEDIDPKTGYQEFKRKRGTDPRFEGLDRKEREALFKEKVRAIEEK- A0A0D3HEW5/721-783 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0E0BBW9/723-785 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0E0BBX1/705-767 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0E0R0J9/754-816 -----KRAAQRAAVEAYKQLLEEASEDINSNKDYKEFKRKWGTDPRFEALDRKERDALFNEKVKSIEE-- A0A0D9XKU0/710-774 ----EKKAAQRAAVEAYKQLLEEVSEDINSNKDYQEFKRKWGTDPRFEALDRKEREALFNEKVKSIEEK- A0A0R0HSA7/623-691 EERKEKRAAQKAAIEGFKRLLDEASEDINYNTDYQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKKA- I1LPK7/585-653 EERKEKRAAQKAAIEGFKRLLDEASEDINYNTDFQTFRKKWGNDPRFEALDRKEQEHLLNERVLPLKKA- K7LP01/640-702 -----KRAALKAAIEGFKRLLDEASEDINYNTDYQTFRKKWRNDPRFEALDRKEQEHLLNERVLPLKK-- #=GC scorecons 0000288997799796787997877899646578659779775989997889986749679784566520 #=GC scorecons_70 _____**********_*************_*_***_******_*************_******__*____ #=GC scorecons_80 _____*****_**_*_************____**__*__***_***********_*_*_**_*_______ #=GC scorecons_90 _____****__**_*__*_**_*__***_____*__*__*___*****_*****___*__*_*_______ //