# STOCKHOLM 1.0 #=GF ID 1.10.10.440/FF/000030 #=GF DE Pre-mRNA-processing protein 40C #=GF AC 1.10.10.440/FF/000030 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 79.126 #=GS A9RCZ7/626-699 AC A9RCZ7 #=GS A9RCZ7/626-699 OS Physcomitrella patens #=GS A9RCZ7/626-699 DE Predicted protein #=GS A9RCZ7/626-699 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; #=GS Q337J6/817-887 AC Q337J6 #=GS Q337J6/817-887 OS Oryza sativa Japonica Group #=GS Q337J6/817-887 DE FF domain containing protein, expressed #=GS Q337J6/817-887 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS F6HFZ8/553-628 AC F6HFZ8 #=GS F6HFZ8/553-628 OS Vitis vinifera #=GS F6HFZ8/553-628 DE Uncharacterized protein #=GS F6HFZ8/553-628 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS A0A0S3SE65/697-776 AC A0A0S3SE65 #=GS A0A0S3SE65/697-776 OS Vigna angularis var. angularis #=GS A0A0S3SE65/697-776 DE Uncharacterized protein #=GS A0A0S3SE65/697-776 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; Vigna angularis var. angularis; #=GS B9HY19/684-759 AC B9HY19 #=GS B9HY19/684-759 OS Populus trichocarpa #=GS B9HY19/684-759 DE Uncharacterized protein #=GS B9HY19/684-759 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A0Q3Q686/794-865 AC A0A0Q3Q686 #=GS A0A0Q3Q686/794-865 OS Brachypodium distachyon #=GS A0A0Q3Q686/794-865 DE Uncharacterized protein #=GS A0A0Q3Q686/794-865 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A1D6GP86/369-443 AC A0A1D6GP86 #=GS A0A1D6GP86/369-443 OS Zea mays #=GS A0A1D6GP86/369-443 DE Pre-mRNA-processing protein 40C #=GS A0A1D6GP86/369-443 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7LP01/703-778 AC K7LP01 #=GS K7LP01/703-778 OS Glycine max #=GS K7LP01/703-778 DE Uncharacterized protein #=GS K7LP01/703-778 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A151TMU5/697-770 AC A0A151TMU5 #=GS A0A151TMU5/697-770 OS Cajanus cajan #=GS A0A151TMU5/697-770 DE Transcription elongation regulator 1 #=GS A0A151TMU5/697-770 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus; Cajanus cajan; #=GS A0A287FAR0/367-437 AC A0A287FAR0 #=GS A0A287FAR0/367-437 OS Hordeum vulgare subsp. vulgare #=GS A0A287FAR0/367-437 DE Uncharacterized protein #=GS A0A287FAR0/367-437 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A3L6TJF8/720-794 AC A0A3L6TJF8 #=GS A0A3L6TJF8/720-794 OS Panicum miliaceum #=GS A0A3L6TJF8/720-794 DE Pre-mRNA-processing protein 40C #=GS A0A3L6TJF8/720-794 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; #=GS A0A1S3TJC3/697-771 AC A0A1S3TJC3 #=GS A0A1S3TJC3/697-771 OS Vigna radiata var. radiata #=GS A0A1S3TJC3/697-771 DE pre-mRNA-processing protein 40C isoform X1 #=GS A0A1S3TJC3/697-771 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna radiata; Vigna radiata var. radiata; #=GS A0A0L9V8R5/697-776 AC A0A0L9V8R5 #=GS A0A0L9V8R5/697-776 OS Vigna angularis #=GS A0A0L9V8R5/697-776 DE Uncharacterized protein #=GS A0A0L9V8R5/697-776 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna; Vigna angularis; #=GS A0A445HZY6/692-766 AC A0A445HZY6 #=GS A0A445HZY6/692-766 OS Glycine soja #=GS A0A445HZY6/692-766 DE Pre-mRNA-processing protein 40C isoform C #=GS A0A445HZY6/692-766 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; #=GS A0A0D9XKT9/806-876 AC A0A0D9XKT9 #=GS A0A0D9XKT9/806-876 OS Leersia perrieri #=GS A0A0D9XKT9/806-876 DE Uncharacterized protein #=GS A0A0D9XKT9/806-876 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0E0R0J8/786-857 AC A0A0E0R0J8 #=GS A0A0E0R0J8/786-857 OS Oryza rufipogon #=GS A0A0E0R0J8/786-857 DE Uncharacterized protein #=GS A0A0E0R0J8/786-857 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0E0M8Y7/817-888 AC A0A0E0M8Y7 #=GS A0A0E0M8Y7/817-888 OS Oryza punctata #=GS A0A0E0M8Y7/817-888 DE Uncharacterized protein #=GS A0A0E0M8Y7/817-888 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; #=GS A0A0D3HEW4/817-888 AC A0A0D3HEW4 #=GS A0A0D3HEW4/817-888 OS Oryza barthii #=GS A0A0D3HEW4/817-888 DE Uncharacterized protein #=GS A0A0D3HEW4/817-888 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0BBX0/817-888 AC A0A0E0BBX0 #=GS A0A0E0BBX0/817-888 OS Oryza glumipatula #=GS A0A0E0BBX0/817-888 DE Uncharacterized protein #=GS A0A0E0BBX0/817-888 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0Q3IA53/624-694 AC A0A0Q3IA53 #=GS A0A0Q3IA53/624-694 OS Brachypodium distachyon #=GS A0A0Q3IA53/624-694 DE Uncharacterized protein #=GS A0A0Q3IA53/624-694 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS I1I4V3/780-851 AC I1I4V3 #=GS I1I4V3/780-851 OS Brachypodium distachyon #=GS I1I4V3/780-851 DE Uncharacterized protein #=GS I1I4V3/780-851 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A1D6GP94/648-722 AC A0A1D6GP94 #=GS A0A1D6GP94/648-722 OS Zea mays #=GS A0A1D6GP94/648-722 DE Pre-mRNA-processing protein 40C #=GS A0A1D6GP94/648-722 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6GP88/605-679 AC A0A1D6GP88 #=GS A0A1D6GP88/605-679 OS Zea mays #=GS A0A1D6GP88/605-679 DE Pre-mRNA-processing protein 40C #=GS A0A1D6GP88/605-679 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6GP79/836-910 AC A0A1D6GP79 #=GS A0A1D6GP79/836-910 OS Zea mays #=GS A0A1D6GP79/836-910 DE Pre-mRNA-processing protein 40C #=GS A0A1D6GP79/836-910 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A0D3HEW5/784-855 AC A0A0D3HEW5 #=GS A0A0D3HEW5/784-855 OS Oryza barthii #=GS A0A0D3HEW5/784-855 DE Uncharacterized protein #=GS A0A0D3HEW5/784-855 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A0E0BBW9/786-857 AC A0A0E0BBW9 #=GS A0A0E0BBW9/786-857 OS Oryza glumipatula #=GS A0A0E0BBW9/786-857 DE Uncharacterized protein #=GS A0A0E0BBW9/786-857 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0BBX1/768-839 AC A0A0E0BBX1 #=GS A0A0E0BBX1/768-839 OS Oryza glumipatula #=GS A0A0E0BBX1/768-839 DE Uncharacterized protein #=GS A0A0E0BBX1/768-839 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0R0J9/817-888 AC A0A0E0R0J9 #=GS A0A0E0R0J9/817-888 OS Oryza rufipogon #=GS A0A0E0R0J9/817-888 DE Uncharacterized protein #=GS A0A0E0R0J9/817-888 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D9XKU0/775-845 AC A0A0D9XKU0 #=GS A0A0D9XKU0/775-845 OS Leersia perrieri #=GS A0A0D9XKU0/775-845 DE Uncharacterized protein #=GS A0A0D9XKU0/775-845 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS K7LP03/692-766 AC K7LP03 #=GS K7LP03/692-766 OS Glycine max #=GS K7LP03/692-766 DE Uncharacterized protein #=GS K7LP03/692-766 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS A0A0R0HSA7/692-766 AC A0A0R0HSA7 #=GS A0A0R0HSA7/692-766 OS Glycine max #=GS A0A0R0HSA7/692-766 DE Uncharacterized protein #=GS A0A0R0HSA7/692-766 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GS I1LPK7/654-728 AC I1LPK7 #=GS I1LPK7/654-728 OS Glycine max #=GS I1LPK7/654-728 DE Uncharacterized protein #=GS I1LPK7/654-728 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; #=GF SQ 32 A9RCZ7/626-699 --EERVKAERASAVAGFRSLLSEKGEISSTSRWSKVKENLRSDPRYKLVERDEREDLFNAMVAELRAVEMEAERAA----- Q337J6/817-887 -----VQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- F6HFZ8/553-628 -AEEKAQAIRAAAVSSFKSMLRDKGDITTSTRWSRVKDSLRNDPRYKCVKHEDREILFNEYISELKAAEEEVEREAK---- A0A0S3SE65/697-776 -AEEKTQAMRAAAAASFKSMLKERGDISFNSRWSRVKESLRDDPRYKSVRHEDREGLFNEYISELKAAEYATERETKAKRE B9HY19/684-759 -AQEKAQAERAYAAASFKSMLRDKGDITVSSRWSRVKDSLRNDPRYKSVKHEDREVFFNEYLYELKAAE-EAERDARG--- A0A0Q3Q686/794-865 -----VQSVRNALITDFKSMLRECKDIISTSHWTKVKEHIRSDPRYKAVKHEERENVFNEYIAELKSAEREVEQAAK---- A0A1D6GP86/369-443 -VQEKVQSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELKSAEQEAEQAA----- K7LP01/703-778 AAEEKAQAMRAAAAASFKSMLKERGDISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELKAAEHAAERET----- A0A151TMU5/697-770 AAEEKAQAMRAAAAAGFKSMLKERGDIIFNSRWSRVKESLRDDPRYKSVRHEDREVLFNEYISELKAAEYAAER------- A0A287FAR0/367-437 ------QSARNAVITDFKSMLRECKDIISTSRWTKVKENFRSDPRYKAVKHEERENAFNEYIAELKSAEWEVEQAAK---- A0A3L6TJF8/720-794 -IQEKVQSMRKAVIADFKSMLRESKDITSASRWTKVKENFRSDPRYKATKHEERETIFNEYIAELKSAEQEAEQAA----- A0A1S3TJC3/697-771 -AEEKTQAMRAAAAASFKSMLKERGDISFNSRWSRVKESLRDDPRYKSVRHEDREGLFNEYLSELKAAEYATERET----- A0A0L9V8R5/697-776 -AEEKTQAMRAAAAASFKSMLKERGDISFNSRWSRVKESLRDDPRYKSVRHEDREGLFNEYISELKAAEYATERETKAKRE A0A445HZY6/692-766 -AEEKAQAMRAAAAASFKSMLKERGDISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELKAAEHAAERET----- A0A0D9XKT9/806-876 -----VQSLRNAVITEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREDAFNEYVAELKSAEKEAEQAA----- A0A0E0R0J8/786-857 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREIAFNEYIAELKSAEKEAEQAA----- A0A0E0M8Y7/817-888 ----KVQSVRNAVIADFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREDAFNEYIAELKSAEKEAEQAA----- A0A0D3HEW4/817-888 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- A0A0E0BBX0/817-888 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- A0A0Q3IA53/624-694 ------QSVRNALITDFKSMLRECKDIISTSHWTKVKEHIRSDPRYKAVKHEERENVFNEYIAELKSAEREVEQAAK---- I1I4V3/780-851 -----VQSVRNALITDFKSMLRECKDIISTSHWTKVKEHIRSDPRYKAVKHEERENVFNEYIAELKSAEREVEQAAK---- A0A1D6GP94/648-722 -VQEKVQSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELKSAEQEAEQAA----- A0A1D6GP88/605-679 -VQEKVQSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELKSAEQEAEQAA----- A0A1D6GP79/836-910 -VQEKVQSMRKAVIANFKSMLRESKDITSTSRWAKVKENFRSDPRYKAMKHEERETIFNEYIVELKSAEQEAEQAA----- A0A0D3HEW5/784-855 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- A0A0E0BBW9/786-857 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- A0A0E0BBX1/768-839 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREVAFNEYIAELKSAEKEAEQAA----- A0A0E0R0J9/817-888 ----KVQSVRNAVIAEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREIAFNEYIAELKSAEKEAEQAA----- A0A0D9XKU0/775-845 -----VQSLRNAVITEFKSMLRESKDITSTSRWTKVKENFRSDARYKAMKHEEREDAFNEYVAELKSAEKEAEQAA----- K7LP03/692-766 -AEEKAQAMRAAAAASFKSMLKERGDISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELKAAEHAAERET----- A0A0R0HSA7/692-766 -AEEKAQAMRAAAAASFKSMLKERGDISFNSRWSRVKENLRDDPRYKCVRHEDREVLFNEYISELKAAEHAAERET----- I1LPK7/654-728 -AEEKAQAMRAAAAASFKSMLKERGDMSFNSRWARVKESLRDDPRYKSVRHEDREVLFNEYISELKAAEHAAERET----- #=GC scorecons 012355865957557498989684588555889579986595969995668879934998875998689356965600000 #=GC scorecons_70 ______*__*_*__*_*******__**___***_****__*_*****_*******__*****_***_**__***_*_____ #=GC scorecons_80 ______*__*_*____*****_*__**___***_****__*_*_***___*****__*****_***_**___*________ #=GC scorecons_90 ______*__*______*****_*__**___***__***__*_*_***___**_**__****__***_**___*________ //