# STOCKHOLM 1.0
#=GF ID 1.10.10.1420/FF/000005
#=GF DE DNA replication factor Cdt1, putative
#=GF AC 1.10.10.1420/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 98.128
#=GS P40382/295-434      AC P40382
#=GS P40382/295-434      OS Schizosaccharomyces pombe 972h-
#=GS P40382/295-434      DE Cell division cycle protein cdt1
#=GS P40382/295-434      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS P40382/295-434      DR GO; GO:0000790; GO:0001934; GO:0005634; GO:0005656; GO:1902985; GO:1903466; 
#=GS Q86S68/518-651      AC Q86S68
#=GS Q86S68/518-651      OS Caenorhabditis elegans
#=GS Q86S68/518-651      DE CDT (S. pombe CDC10 Dependent Transcript) homolog
#=GS Q86S68/518-651      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q86S68/518-651      DR GO; GO:0000785; GO:0005515; GO:0005634; GO:0005737; 
#=GS W4XF82/546-682      AC W4XF82
#=GS W4XF82/546-682      OS Strongylocentrotus purpuratus
#=GS W4XF82/546-682      DE Uncharacterized protein
#=GS W4XF82/546-682      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4XJT1/16-143       AC W4XJT1
#=GS W4XJT1/16-143       OS Strongylocentrotus purpuratus
#=GS W4XJT1/16-143       DE Uncharacterized protein
#=GS W4XJT1/16-143       DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS A9SP42/660-787      AC A9SP42
#=GS A9SP42/660-787      OS Physcomitrella patens
#=GS A9SP42/660-787      DE Predicted protein
#=GS A9SP42/660-787      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS A9RPI7/758-878      AC A9RPI7
#=GS A9RPI7/758-878      OS Physcomitrella patens
#=GS A9RPI7/758-878      DE Predicted protein
#=GS A9RPI7/758-878      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella; Physcomitrella patens; 
#=GS H3GW97/234-364      AC H3GW97
#=GS H3GW97/234-364      OS Phytophthora ramorum
#=GS H3GW97/234-364      DE Uncharacterized protein
#=GS H3GW97/234-364      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS B7P9P3/193-326      AC B7P9P3
#=GS B7P9P3/193-326      OS Ixodes scapularis
#=GS B7P9P3/193-326      DE DNA replication factor Cdt1, putative
#=GS B7P9P3/193-326      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A2G5VVZ4/538-672  AC A0A2G5VVZ4
#=GS A0A2G5VVZ4/538-672  OS Caenorhabditis nigoni
#=GS A0A2G5VVZ4/538-672  DE Uncharacterized protein
#=GS A0A2G5VVZ4/538-672  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A8XL50/495-629      AC A8XL50
#=GS A8XL50/495-629      OS Caenorhabditis briggsae
#=GS A8XL50/495-629      DE Protein CBR-CDT-1
#=GS A8XL50/495-629      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS B7PCG8/290-421      AC B7PCG8
#=GS B7PCG8/290-421      OS Ixodes scapularis
#=GS B7PCG8/290-421      DE DNA replication factor Cdt1, putative
#=GS B7PCG8/290-421      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GF SQ 11
P40382/295-434              RKLTSSQLTLRQSSLFDRVRKKQ---KAMEAKKAEEFKNNLVVHTLAKEKVSFVRIIDLIFVQLSTWPTKRSFSMSEIVTSMQMSISSSLSPDQCAKAIELLSKALPAWCTIN-LLGNIQVVTFSRIVNGKPYLRSQLIEELQT--
Q86S68/518-651              -MQKEQKSQG-AMSLLERIRAKEAIKKAAEACIDKDLERRKQRLTLLRDR--YVRIVCNHYTA----KRAQTMEIDVICKFVQFSSSNSSSIPDIMDHLRLLCEVAPMYISEA-SLMNKKYFRFTDN-NIEA-INELLDEELQIT-
W4XF82/546-682              PKKGNQALKGVSQDLLSRIKAKEARNTVITMMRTPEEEGRIGMLERLPV---LCKILRVFFLA----EKKAALPIDSIIQKLMESYRSALSRDDLEKHIALMLEILPDWLKKV-IIRKTTYIKMDRTKEMSV-VIDIINNQLKEAK
W4XJT1/16-143               ---TYQSLQ------FALIKAKEARNTVITMMRTPEEEGRIGMLERLPV---LCKILRVFFLA----EKKAALPIDSIIQKLMESYRSALSRDDLEKHIALMLEILPDWLKKV-IIRKTTYIKMDRTKEMSV-VIDIINNQLKEAK
A9SP42/660-787              ----MLMIQGIPSKLVNSVLREELRVAEENRDDVVALRRHQQMKAGITL---LFDQLRLIVQS----SNKSVFPCKKLLSKLVSSNTEMTDRTEVEVRLNLLMELAPEWISAKPSLAGDTLYRIDKNADVMG-VRKRLCS------
A9RPI7/758-878              ---DLNMIQGLPAELVNSVIKEELRVAEEKSSDVVAVRRRQQMMAGLPN---LFNQLCLIFQS----SNKSVFPYKDLLAKIVSSNTEMTDRVEVEERLKMLTELAPEWISAKKSLTGDTLYRFVFCHNLL---------------
H3GW97/234-364              -KPVPQDLKTLPDWLIHKVRKQELGRKGVAESSAKALKRR--LLSTLPQ---LSDQLQSLVMV----TRKTIFPKAEVLRKLA---ARAPIKGKVEEQLYLLESLVPEWLTVV-LDDGEEYIKISTGSKYNA-VKASLRRAISVEA
B7P9P3/193-326              -ADPTARLKGVSEDLLARIRAREAFKLVQQMTIPPEDEKERTRLSHLPE---LIRITRSLFLA----EQKAAISKNVFVQKVKESFSSVLAVSEVEELIQLASNVLPDWFRVL-VIQRGTFVKIVKEKDVNA-LVDRVTKKLAA--
A0A2G5VVZ4/538-672          -MQKEQKSKG-SMSLLERIRAKEAIKKAADACVDKDLEKRKQRLTLLKER--YVRIVCNHYTA----KRAQTMEMETIAKFVQFSSSNPTTIPDITDHLKLMCEVAPMYITEA-TFMNKKYLRFNDN-NIEA-ISEILVEELDKTQ
A8XL50/495-629              -MQKEQKSKG-SMSLLERIRAKEAIKKAADACVDKDLERRKQRLTLLKER--YVRIVCNHYTA----KRAQTMEMETIAKFVQFSSSNPTTIPDITDHLKLMCEVAPMYITEA-TFMNKKYLRFNDN-NIEA-ISEILVEELDKTQ
B7PCG8/290-421              ---ARECLKGVSQDLLARIRERESFKLVQKMTLRPEHEKERTDLLNLRE---FIRITRSLFLA----EQKAAIPRDELVCKVKESFSCVLAVDEVEALVQLASRVMPDWFKVL-SIKRGVFVKIVKEKDANE-LVARITSKLQE--
#=GC scorecons              01122424541323753575458323343333233535552335326430005355543353500003463444343543453272443443355544638535549464433034243454653331533304232423242210
#=GC scorecons_70           ______________*___*___*_______________________*_____________________________________*_______________*_____*_*_____________________________________
#=GC scorecons_80           ______________*_______*_____________________________________________________________*_______________*_____*_______________________________________
#=GC scorecons_90           ____________________________________________________________________________________________________*_____*_______________________________________
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