# STOCKHOLM 1.0
#=GF ID 1.10.10.1420/FF/000004
#=GF DE DNA replication factor Cdt1
#=GF AC 1.10.10.1420/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 47.418
#=GS Q7JVY2/606-742      AC Q7JVY2
#=GS Q7JVY2/606-742      OS Drosophila melanogaster
#=GS Q7JVY2/606-742      DE Double parked, isoform A
#=GS Q7JVY2/606-742      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q7JVY2/606-742      DR GO; GO:0000076; GO:0000281; GO:0005515; GO:0005634; GO:0005657; GO:0005737; GO:0006260; GO:0007304; GO:0007307; GO:0019730; GO:0021782; GO:0042023; GO:0042065; GO:0051298; 
#=GS D6WGF9/439-575      AC D6WGF9
#=GS D6WGF9/439-575      OS Tribolium castaneum
#=GS D6WGF9/439-575      DE DNA replication factor Cdt1-like Protein
#=GS D6WGF9/439-575      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS B4J5Q3/582-717      AC B4J5Q3
#=GS B4J5Q3/582-717      OS Drosophila grimshawi
#=GS B4J5Q3/582-717      DE GH21650
#=GS B4J5Q3/582-717      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4KM56/561-696      AC B4KM56
#=GS B4KM56/561-696      OS Drosophila mojavensis
#=GS B4KM56/561-696      DE Uncharacterized protein
#=GS B4KM56/561-696      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4H8D2/593-728      AC B4H8D2
#=GS B4H8D2/593-728      OS Drosophila persimilis
#=GS B4H8D2/593-728      DE GL20043
#=GS B4H8D2/593-728      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A3B0J6V2/585-720  AC A0A3B0J6V2
#=GS A0A3B0J6V2/585-720  OS Drosophila guanche
#=GS A0A3B0J6V2/585-720  DE Blast:DNA replication factor Cdt1
#=GS A0A3B0J6V2/585-720  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A1W4W0J1/604-739  AC A0A1W4W0J1
#=GS A0A1W4W0J1/604-739  OS Drosophila ficusphila
#=GS A0A1W4W0J1/604-739  DE DNA replication factor Cdt1
#=GS A0A1W4W0J1/604-739  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS Q28YP3/593-728      AC Q28YP3
#=GS Q28YP3/593-728      OS Drosophila pseudoobscura pseudoobscura
#=GS Q28YP3/593-728      DE Uncharacterized protein
#=GS Q28YP3/593-728      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B3MEW7/598-734      AC B3MEW7
#=GS B3MEW7/598-734      OS Drosophila ananassae
#=GS B3MEW7/598-734      DE Uncharacterized protein
#=GS B3MEW7/598-734      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4HS34/607-743      AC B4HS34
#=GS B4HS34/607-743      OS Drosophila sechellia
#=GS B4HS34/607-743      DE GM20140
#=GS B4HS34/607-743      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4QGG6/600-736      AC B4QGG6
#=GS B4QGG6/600-736      OS Drosophila simulans
#=GS B4QGG6/600-736      DE GD25618
#=GS B4QGG6/600-736      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B3NQE0/605-741      AC B3NQE0
#=GS B3NQE0/605-741      OS Drosophila erecta
#=GS B3NQE0/605-741      DE Uncharacterized protein
#=GS B3NQE0/605-741      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4P7E3/606-742      AC B4P7E3
#=GS B4P7E3/606-742      OS Drosophila yakuba
#=GS B4P7E3/606-742      DE Dup
#=GS B4P7E3/606-742      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 13
Q7JVY2/606-742              PDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKS
D6WGF9/439-575              PTQVTSVLKGIPKALLEKVRQKQAAKALVSMTRTVDKEKEVQLYARLPEIARLTRNLFVTEKKTVLELDFVIDKLGNSYRTFLNKAEMENHLKAISNAVPGWLVFHKLRSSVFLKLAKNADLSQVLSKLEKISKEKN
B4J5Q3/582-717              -DVKSNLLKGLPKSLIEKIRAKQAAKALDAMTRRPSQDQEATKYTRLPELARHLRNVFVTERKSVLTLEIIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYVKIAKDMDMNKIIEKLEVIANEKS
B4KM56/561-696              -DATSNLLKGLPKSLIDKIRAKQAAKALDAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKSVLTLEIIIKKIQNSFRANLTPQEIETHLKLLAKELPTWATFHEVRKTMYLKIAKDMDMNKIIEKLEEIANEKS
B4H8D2/593-728              PDATSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPAWAAFHEVRKTMYVKVAKDMDMNKIIEKLESIANGK-
A0A3B0J6V2/585-720          PDATSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPAWAAFHEVRKTMYLKVAKDMDMNKIIEQLESIANGK-
A0A1W4W0J1/604-739          PDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATNYSRLPELARHLRNVFVTERKGVLTLEVVIKKIQNSFRANLTPQEIEAHLKLLAKEVPSWASFHEVRKTMYLKVAKDMDMNKIIEQLEGVANAK-
Q28YP3/593-728              PDATSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPAWAAFHEVRKTMYVKVAKDMDMNKIIEKLESIANGK-
B3MEW7/598-734              PDATSNLLKGLPKSLIEKIRAKQAAKALDAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEIVIKKIQNSFRANLTPLEIETHLKILAKELPSWASFHEVRKTMYLKVAKDLDMNKIIEKLENLANAKT
B4HS34/607-743              PDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKS
B4QGG6/600-736              PDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKS
B3NQE0/605-741              PDASSSLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKS
B4P7E3/606-742              PDASSNLLKGLPKSLIEKIRAKQAAKALEAMTRRPSQDQEATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIEAHLKLLAKELPSWASFHEVRKTMYLKVAKDMDMNKIIEKLESVANAKS
#=GC scorecons              65536669996996968979599999994699955667696549599996995599699997959959756969659979659655969599956665694954996695667795996596667657993666492
#=GC scorecons_70           ____*_**************_*******_****___*****__*_*******__*********_**_**_**_**_*****_**__***_***_***_**_*__*****_*****_***_******_***_***_*_
#=GC scorecons_80           _______***_**_*_****_*******__***____*_*___*_****_**__**_******_**_**__*_*__****__*___*_*_***______*_*__**__*___***_**__*___*__***_____*_
#=GC scorecons_90           _______***_**_*_**_*_*******__***______*___*_****_**__**_****_*_**_*___*_*__**_*__*___*_*_***______*_*__**__*_____*_**__*_______**_____*_
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